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Über dieses Buch

The growth in the Bioinformatics and Computational Biology fields over the last few years has been remarkable and the trend is to increase its pace. In fact, the need for computational techniques that can efficiently handle the huge amounts of data produced by the new experimental techniques in Biology is still increasing driven by new advances in Next Generation Sequencing, several types of the so called omics data and image acquisition, just to name a few. The analysis of the datasets that produces and its integration call for new algorithms and approaches from fields such as Databases, Statistics, Data Mining, Machine Learning, Optimization, Computer Science and Artificial Intelligence. Within this scenario of increasing data availability, Systems Biology has also been emerging as an alternative to the reductionist view that dominated biological research in the last decades. Indeed, Biology is more and more a science of information requiring tools from the computational sciences. In the last few years, we have seen the surge of a new generation of interdisciplinary scientists that have a strong background in the biological and computational sciences. In this context, the interaction of researchers from different scientific fields is, more than ever, of foremost importance boosting the research efforts in the field and contributing to the education of a new generation of Bioinformatics scientists. PACBB‘13 hopes to contribute to this effort promoting this fruitful interaction. PACBB'13 technical program included 19 papers from a submission pool of 32 papers spanning many different sub-fields in Bioinformatics and Computational Biology. Therefore, the conference will certainly have promoted the interaction of scientists from diverse research groups and with a distinct background (computer scientists, mathematicians, biologists). The scientific content will certainly be challenging and will promote the improvement of the work that is being developed by each of the participants.

Inhaltsverzeichnis

Frontmatter

2013 | OriginalPaper | Buchkapitel

Gene Functional Prediction Using Clustering Methods for the Analysis of Tomato Microarray Data

Liliana López-Kleine, José Romeo, Francisco Torres-Avilés

2013 | OriginalPaper | Buchkapitel

Analysis of Word Symmetries in Human Genomes Using Next-Generation Sequencing Data

Vera Afreixo, João M. O. S. Rodrigues, Sara P. Garcia

2013 | OriginalPaper | Buchkapitel

A Clustering Framework Applied to DNA Microarray Data

José A. Castellanos-Garzón, Fernando Díaz

2013 | OriginalPaper | Buchkapitel

Segmentation of DNA into Coding and Noncoding Regions Based on Inter-STOP Symbols Distances

Carlos A. C. Bastos, Vera Afreixo, Sara P. Garcia, Armando J. Pinho

2013 | OriginalPaper | Buchkapitel

Assignment of Novel Functions to Helicobacter pylori 26695’s Genome

Tiago Resende, Daniela M. Correia, Isabel Rocha

2013 | OriginalPaper | Buchkapitel

Analysing Quality Measures of Phasing Algorithms in Genome-Wide Haplotyping

Sergio Torres-Sánchez, Manuel García-Sánchez, Nuria Medina-Medina, María Mar Abad-Grau

2013 | OriginalPaper | Buchkapitel

Search Functional Annotations Genetic Relationships of Coffee through Bio2RDF

Luis Bertel-Paternina, Luis F. Castillo, Alvaro Gaitán-Bustamente, Narmer Galeano-Vanegas, Gustavo Isaza

2013 | OriginalPaper | Buchkapitel

A Cellular Automaton Model of the Effects of Maspin on Cell Migration

M. A. Al-Mamun, M. A. Hossain, M. S. Alam, R. Bass

2013 | OriginalPaper | Buchkapitel

Quantitative Characterization of Protein Networks of the Oral Cavity

Fernanda Correia Barbosa, Joel P. Arrais, José Luís Oliveira

2013 | OriginalPaper | Buchkapitel

Analysing Relevant Diseases from Iberian Tweets

Víctor M. Prieto, Sergio Matos, Manuel Álvarez, Fidel Cacheda, José Luís Oliveira

2013 | OriginalPaper | Buchkapitel

Optimized Workflow for the Healthcare Logistic: Case of the Pediatric Emergency Department

Inès Ajmi, Hayfa Zgaya, Slim Hammadi

2013 | OriginalPaper | Buchkapitel

Boosting the Detection of Transposable Elements Using Machine Learning

Tiago Loureiro, Rui Camacho, Jorge Vieira, Nuno A. Fonseca

2013 | OriginalPaper | Buchkapitel

On an Individual-Based Model for Infectious Disease Outbreaks

Pierpaolo Vittorini, Ferdinando di Orio

2013 | OriginalPaper | Buchkapitel

A Statistical Comparison of SimTandem with State-of-the-Art Peptide Identification Tools

Jiří Novák, Timo Sachsenberg, David Hoksza, Tomáš Skopal, Oliver Kohlbacher

2013 | OriginalPaper | Buchkapitel

HaptreeBuilder: Web Generation and Visualization of Risk Haplotype Trees

Dimitra Kamari, María Mar Abad-Grau, Fuencisla Matesanz

2013 | OriginalPaper | Buchkapitel

Speeding Up Phylogenetic Model Checking

José Ignacio Requeno, José Manuel Colom

2013 | OriginalPaper | Buchkapitel

Comp2ROC

R Package to Compare Two ROC Curves
Hugo Frade, A. C. Braga

2013 | OriginalPaper | Buchkapitel

Network Visualization Tools to Enhance Metabolic Engineering Platforms

Alberto Noronha, Paulo Vilaça, Miguel Rocha

2013 | OriginalPaper | Buchkapitel

A Workflow for the Application of Biclustering to Mass Spectrometry Data

Hugo López-Fernández, Miguel Reboiro-Jato, Sara C. Madeira, Rubén López-Cortés, J. D. Nunes-Miranda, H. M. Santos, Florentino Fdez-Riverola, Daniel Glez-Peña

Backmatter

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