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2020 | OriginalPaper | Buchkapitel

A Framework for the Discovery of Retinal Biomarkers in Optical Coherence Tomography Angiography (OCTA)

verfasst von : Ylenia Giarratano, Alisa Pavel, Jie Lian, Rayna Andreeva, Alessandro Fontanella, Rik Sarkar, Laura J. Reid, Shareen Forbes, Dan Pugh, Tariq E. Farrah, Neeraj Dhaun, Baljean Dhillon, Tom MacGillivray, Miguel O. Bernabeu

Erschienen in: Ophthalmic Medical Image Analysis

Verlag: Springer International Publishing

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Abstract

Recent studies have demonstrated the potential of OCTA retinal imaging for the discovery of biomarkers of vascular disease of the eye and other organs. Furthermore, advances in deep learning have made it possible to train algorithms for the automated detection of such biomarkers. However, two key limitations of this approach are the need for large numbers of labeled images to train the algorithms, which are often not met by the typical single-centre prospective studies in the literature, and the lack of interpretability of the features learned during training. In the current study, we developed a network analysis framework to characterise retinal vasculature where geometric and topological information are exploited to increase the performance of classifiers trained on tens of OCTA images. We demonstrate our approach in two different diseases with a retinal vascular footprint: diabetic retinopathy (DR) and chronic kidney disease (CKD). Our approach enables the discovery of previously unreported retinal vascular morphological differences in DR and CKD, and demonstrate the potential of OCTA for automated disease assessment.

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Literatur
1.
Zurück zum Zitat Alam, M., Zhang, Y., Lim, J.I., Chan, R.V., Yang, M., Yao, X.: Quantitative optical coherence tomography angiography features for objective classification and staging of diabetic retinopathy. Retina (Philadelphia, Pa.) 40(2), 322–332 (2020) Alam, M., Zhang, Y., Lim, J.I., Chan, R.V., Yang, M., Yao, X.: Quantitative optical coherence tomography angiography features for objective classification and staging of diabetic retinopathy. Retina (Philadelphia, Pa.) 40(2), 322–332 (2020)
2.
Zurück zum Zitat Giarratano, Y., et al.: Automated segmentation of optical coherence tomography angiography images: benchmark data and clinically relevant metrics. arXiv:1912.09978v2 (2020) Giarratano, Y., et al.: Automated segmentation of optical coherence tomography angiography images: benchmark data and clinically relevant metrics. arXiv:​1912.​09978v2 (2020)
3.
Zurück zum Zitat Katifori, E., Magnasco, M.O.: Quantifying loopy network architectures. PLoS ONE 7(6), e37994 (2012)CrossRef Katifori, E., Magnasco, M.O.: Quantifying loopy network architectures. PLoS ONE 7(6), e37994 (2012)CrossRef
4.
Zurück zum Zitat Khadamy, J., Aghdam, K., Falavarjani, K.: An update on optical coherence tomography angiography in diabetic retinopathy. J. Ophthalmic Vis. Res. 13, 487 (2018)CrossRef Khadamy, J., Aghdam, K., Falavarjani, K.: An update on optical coherence tomography angiography in diabetic retinopathy. J. Ophthalmic Vis. Res. 13, 487 (2018)CrossRef
5.
Zurück zum Zitat Kim, A.Y., Chu, Z., Shahidzadeh, A., Wang, R.K., Puliafito, C.A., Kashani, A.H.: Quantifying microvascular density and morphology in diabetic retinopathy using spectral-domain optical coherence tomography angiography. Investig. Ophthalmol. Vis. Sci. 57(9), OCT362–OCT370 (2016) Kim, A.Y., Chu, Z., Shahidzadeh, A., Wang, R.K., Puliafito, C.A., Kashani, A.H.: Quantifying microvascular density and morphology in diabetic retinopathy using spectral-domain optical coherence tomography angiography. Investig. Ophthalmol. Vis. Sci. 57(9), OCT362–OCT370 (2016)
6.
Zurück zum Zitat Krawitz, B.D., et al.: Acircularity index and axis ratio of the foveal avascular zone in diabetic eyes and healthy controls measured by optical coherence tomography angiography. Vis. Res. 139, 177–186 (2017)CrossRef Krawitz, B.D., et al.: Acircularity index and axis ratio of the foveal avascular zone in diabetic eyes and healthy controls measured by optical coherence tomography angiography. Vis. Res. 139, 177–186 (2017)CrossRef
7.
Zurück zum Zitat Le, D., Alam, M.N., Lim, J.I., Chan, R.V.P., Yao, X.: Deep learning for objective OCTA detection of diabetic retinopathy. In: Manns, F., Ho, A.,Söderberg, P.G. (eds.) Ophthalmic Technologies XXX. vol. 11218, pp. 98 –103. International Society for Optics and Photonics, SPIE (2020) Le, D., Alam, M.N., Lim, J.I., Chan, R.V.P., Yao, X.: Deep learning for objective OCTA detection of diabetic retinopathy. In: Manns, F., Ho, A.,Söderberg, P.G. (eds.) Ophthalmic Technologies XXX. vol. 11218, pp. 98 –103. International Society for Optics and Photonics, SPIE (2020)
8.
Zurück zum Zitat Mastropasqua, R., et al.: Foveal avascular zone area and parafoveal vessel density measurements in different stages of diabetic retinopathy by optical coherence tomography angiography. Int. J. Ophthalmol. 10(10), 1545–1551 (2017) Mastropasqua, R., et al.: Foveal avascular zone area and parafoveal vessel density measurements in different stages of diabetic retinopathy by optical coherence tomography angiography. Int. J. Ophthalmol. 10(10), 1545–1551 (2017)
9.
Zurück zum Zitat Modes, C.D., Magnasco, M.O., Katifori, E.: Extracting hidden hierarchies in 3D distribution networks. Phys. Rev. X 6(3), 1–12 (2016) Modes, C.D., Magnasco, M.O., Katifori, E.: Extracting hidden hierarchies in 3D distribution networks. Phys. Rev. X 6(3), 1–12 (2016)
10.
Zurück zum Zitat Nesper, P.L., et al.: Quantifying microvascular abnormalities with increasing severity of diabetic retinopathy using optical coherence tomography angiography. Investig. Ophthalmol. Vis. Sci. 58(6), BIO307–BIO315 (2017) Nesper, P.L., et al.: Quantifying microvascular abnormalities with increasing severity of diabetic retinopathy using optical coherence tomography angiography. Investig. Ophthalmol. Vis. Sci. 58(6), BIO307–BIO315 (2017)
11.
Zurück zum Zitat Sandhu, H.S., et al.: Automated diabetic retinopathy detection using optical coherence tomography angiography: a pilot study. Br. J. Ophthalmol. 102(11), 1564–1569 (2018)CrossRef Sandhu, H.S., et al.: Automated diabetic retinopathy detection using optical coherence tomography angiography: a pilot study. Br. J. Ophthalmol. 102(11), 1564–1569 (2018)CrossRef
12.
Zurück zum Zitat Schneider, S., Sbalzarini, I.F.: Finding faces in a planar embedding of a graph. Technical report, MOSAIC Group, MPI-CBG (2015) Schneider, S., Sbalzarini, I.F.: Finding faces in a planar embedding of a graph. Technical report, MOSAIC Group, MPI-CBG (2015)
13.
Zurück zum Zitat Sima, C., Dougherty, E.R.: The peaking phenomenon in the presence of feature-selection. Pattern Recognit. Lett. 29(11), 1667–1674 (2008)CrossRef Sima, C., Dougherty, E.R.: The peaking phenomenon in the presence of feature-selection. Pattern Recognit. Lett. 29(11), 1667–1674 (2008)CrossRef
14.
Zurück zum Zitat Smart, J.S.: The analysis of drainage network composition. Earth Surf. Process. 3(2), 129–170 (1978)CrossRef Smart, J.S.: The analysis of drainage network composition. Earth Surf. Process. 3(2), 129–170 (1978)CrossRef
15.
Zurück zum Zitat Takase, N., Nozaki, M., Kato, A., Ozeki, H., Yoshida, M., Ogura, Y.: Enlargement of foveal avascular zone in diabetic eyes evaluated by en face optical coherence tomography angiography. Retina 35(11), 2377–2383 (2015)CrossRef Takase, N., Nozaki, M., Kato, A., Ozeki, H., Yoshida, M., Ogura, Y.: Enlargement of foveal avascular zone in diabetic eyes evaluated by en face optical coherence tomography angiography. Retina 35(11), 2377–2383 (2015)CrossRef
16.
Zurück zum Zitat Tang, F.Y., et al.: Determinants of quantitative optical coherence tomography angiography metrics in patients with diabetes. Sci. Rep. 7(1), 1–10 (2017)CrossRef Tang, F.Y., et al.: Determinants of quantitative optical coherence tomography angiography metrics in patients with diabetes. Sci. Rep. 7(1), 1–10 (2017)CrossRef
18.
Zurück zum Zitat Van De Kreeke, J.A., et al.: Optical coherence tomography angiography in preclinical Alzheimer’s disease. Br. J. Ophthalmol. 104, 157–161 (2019)CrossRef Van De Kreeke, J.A., et al.: Optical coherence tomography angiography in preclinical Alzheimer’s disease. Br. J. Ophthalmol. 104, 157–161 (2019)CrossRef
19.
Zurück zum Zitat Wagner, S.K., et al.: Insights into systemic disease through retinal imaging-based oculomics. Transl. Vis. Sci. Technol. 9(2), 6 (2020)CrossRef Wagner, S.K., et al.: Insights into systemic disease through retinal imaging-based oculomics. Transl. Vis. Sci. Technol. 9(2), 6 (2020)CrossRef
20.
Zurück zum Zitat Werner, C., Smart, J.S.: Some new methods of topologic classification of channel networks. Geogr. Anal. 5(4), 271–295 (1973)CrossRef Werner, C., Smart, J.S.: Some new methods of topologic classification of channel networks. Geogr. Anal. 5(4), 271–295 (1973)CrossRef
21.
Zurück zum Zitat Yoon, S.P., et al.: Retinal microvascular and neurodegenerative changes in Alzheimer’s disease and mild cognitive impairment compared with control participants. Ophthalmol. Retin. 3(6), 489–499 (2019)CrossRef Yoon, S.P., et al.: Retinal microvascular and neurodegenerative changes in Alzheimer’s disease and mild cognitive impairment compared with control participants. Ophthalmol. Retin. 3(6), 489–499 (2019)CrossRef
Metadaten
Titel
A Framework for the Discovery of Retinal Biomarkers in Optical Coherence Tomography Angiography (OCTA)
verfasst von
Ylenia Giarratano
Alisa Pavel
Jie Lian
Rayna Andreeva
Alessandro Fontanella
Rik Sarkar
Laura J. Reid
Shareen Forbes
Dan Pugh
Tariq E. Farrah
Neeraj Dhaun
Baljean Dhillon
Tom MacGillivray
Miguel O. Bernabeu
Copyright-Jahr
2020
DOI
https://doi.org/10.1007/978-3-030-63419-3_16