Skip to main content

2012 | OriginalPaper | Buchkapitel

2. A Test of Kimura’s Mutation-Rate Conjecture

verfasst von : John W. Drake

Erschienen in: Radiobiology and Environmental Security

Verlag: Springer Netherlands

Aktivieren Sie unsere intelligente Suche, um passende Fachinhalte oder Patente zu finden.

search-config
loading …

Abstract

Mutation is the first of the four great engines of evolution and the prime source of heritable variation in all living and semi-living organisms and their molecular parasites. As a result, the processes and products of mutation have been deeply explored at both the phenomenological and the mechanistic levels for more than a century. There has been notable progress at both levels over the last half century, with the result that the phylogeny of mutation has become fairly well codified, especially the rates and kinds of mutation in as diverse organisms as could be probed. These explorations began to coalesce in the 1990s and soon comprised a small number of broad generalizations. These include very high genomic mutation rates in riboviruses and some higher eukaryotes, and strikingly similar genomic mutation rates in most DNA microbes. However, highly informative exceptions have recently been observed.

Sie haben noch keine Lizenz? Dann Informieren Sie sich jetzt über unsere Produkte:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literatur
1.
Zurück zum Zitat Drake JW (1991) A constant rate of spontaneous mutation in DNA-based microbes. Proc Natl Acad Sci USA 88:7160–7164CrossRef Drake JW (1991) A constant rate of spontaneous mutation in DNA-based microbes. Proc Natl Acad Sci USA 88:7160–7164CrossRef
2.
Zurück zum Zitat Drake JW (2009) Avoiding dangerous missense: thermophiles display especially low mutation rates. PLoS Genet 5:e1000520CrossRef Drake JW (2009) Avoiding dangerous missense: thermophiles display especially low mutation rates. PLoS Genet 5:e1000520CrossRef
3.
Zurück zum Zitat Drake JW, Holland JJ (1999) Mutation rates among RNA viruses. Proc Natl Acad Sci USA 96:13910–13913CrossRef Drake JW, Holland JJ (1999) Mutation rates among RNA viruses. Proc Natl Acad Sci USA 96:13910–13913CrossRef
4.
Zurück zum Zitat Drake JW, Charlesworth B, Charlesworth D, Crow JF (1998) Rates of spontaneous mutation. Genetics 148:1667–1686 Drake JW, Charlesworth B, Charlesworth D, Crow JF (1998) Rates of spontaneous mutation. Genetics 148:1667–1686
5.
Zurück zum Zitat Drake JW, Bebenek A, Kissling GE, Peddada S (2005) Clusters of mutations from transient hypermutability. Proc Natl Acad Sci USA 102:12849–12854 Drake JW, Bebenek A, Kissling GE, Peddada S (2005) Clusters of mutations from transient hypermutability. Proc Natl Acad Sci USA 102:12849–12854
6.
Zurück zum Zitat Fisher RA (1930) The genetical theory of natural selection. Oxford University Press, Oxford Fisher RA (1930) The genetical theory of natural selection. Oxford University Press, Oxford
7.
Zurück zum Zitat Friedman R, Drake JW, Hughes AL (2004) Genome-wide patterns of nucleotide substitution reveal stringent functional constraints on the protein sequences of thermophiles. Genetics 167:1507–1512CrossRef Friedman R, Drake JW, Hughes AL (2004) Genome-wide patterns of nucleotide substitution reveal stringent functional constraints on the protein sequences of thermophiles. Genetics 167:1507–1512CrossRef
8.
Zurück zum Zitat Gibson JL, Lombardo MJ, Thornton PC, Hu KH, Galhardo RS, Beadle B, Habib A, Magner DB, Frost LS, Herman C, Hastings PJ, Rosenberg SM (2010) The sigma(E) stress response is required for stress-induced mutation and amplification in Escherichia coli. Mol Microbiol 77:415–430CrossRef Gibson JL, Lombardo MJ, Thornton PC, Hu KH, Galhardo RS, Beadle B, Habib A, Magner DB, Frost LS, Herman C, Hastings PJ, Rosenberg SM (2010) The sigma(E) stress response is required for stress-induced mutation and amplification in Escherichia coli. Mol Microbiol 77:415–430CrossRef
9.
Zurück zum Zitat Grogan DW, Carver GT, Drake JW (2001) Genetic fidelity under harsh conditions: analysis of spontaneous mutation in the thermoacidophilic archaeon Sulfolobus acidocaldarius. Proc Natl Acad Sci USA 98:7928–7933CrossRef Grogan DW, Carver GT, Drake JW (2001) Genetic fidelity under harsh conditions: analysis of spontaneous mutation in the thermoacidophilic archaeon Sulfolobus acidocaldarius. Proc Natl Acad Sci USA 98:7928–7933CrossRef
10.
Zurück zum Zitat Kimura M (1967) On the evolutionary adjustment of spontaneous mutation rates. Genet Res 9:23–34CrossRef Kimura M (1967) On the evolutionary adjustment of spontaneous mutation rates. Genet Res 9:23–34CrossRef
11.
Zurück zum Zitat Mackwan RR, Carver GT, Kissling GE, Drake JW, Grogan DW (2008) The rate and character of spontaneous mutation in Thermus thermophilus. Genetics 180:17–25CrossRef Mackwan RR, Carver GT, Kissling GE, Drake JW, Grogan DW (2008) The rate and character of spontaneous mutation in Thermus thermophilus. Genetics 180:17–25CrossRef
12.
Zurück zum Zitat Malpica JM, Fraile A, Moreno I, Obies CI, Drake JW, García-Arenal F (2002) The rate and character of spontaneous mutation in an RNA virus. Genetics 162:1505–1511 Malpica JM, Fraile A, Moreno I, Obies CI, Drake JW, García-Arenal F (2002) The rate and character of spontaneous mutation in an RNA virus. Genetics 162:1505–1511
13.
Zurück zum Zitat Petrosino JF, Galhardo RS, Morales LD, Rosenberg SM (2009) Stress-induced beta-lactam antibiotic resistance mutation and sequences of stationary-phase mutations in the Escherichia coli chromosome. J Bacteriol 191:5881–5889CrossRef Petrosino JF, Galhardo RS, Morales LD, Rosenberg SM (2009) Stress-induced beta-lactam antibiotic resistance mutation and sequences of stationary-phase mutations in the Escherichia coli chromosome. J Bacteriol 191:5881–5889CrossRef
14.
Zurück zum Zitat Rosche WA, Foster PL (2000) Determining mutation rates in bacterial populations. Methods 20:4–17CrossRef Rosche WA, Foster PL (2000) Determining mutation rates in bacterial populations. Methods 20:4–17CrossRef
15.
Zurück zum Zitat Schultz GE Jr, Drake JW (2008) Templated mutagenesis in bacteriophage T4 involving imperfect direct or indirect sequence repeats. Genetics 178:661–673CrossRef Schultz GE Jr, Drake JW (2008) Templated mutagenesis in bacteriophage T4 involving imperfect direct or indirect sequence repeats. Genetics 178:661–673CrossRef
16.
Zurück zum Zitat Sturtevant AH (1937) Essays on evolution. I. On the effects of selection on mutation rate. Quart Rev Biol 12:464–467CrossRef Sturtevant AH (1937) Essays on evolution. I. On the effects of selection on mutation rate. Quart Rev Biol 12:464–467CrossRef
Metadaten
Titel
A Test of Kimura’s Mutation-Rate Conjecture
verfasst von
John W. Drake
Copyright-Jahr
2012
Verlag
Springer Netherlands
DOI
https://doi.org/10.1007/978-94-007-1939-2_2