Skip to main content
Erschienen in: Journal of Scientific Computing 3/2016

04.06.2016

A Two-Stage Low Rank Approach for Calibrationless Dynamic Parallel Magnetic Resonance Image Reconstruction

verfasst von: Likun Hou, Hao Gao, Xiaoqun Zhang

Erschienen in: Journal of Scientific Computing | Ausgabe 3/2016

Einloggen

Aktivieren Sie unsere intelligente Suche, um passende Fachinhalte oder Patente zu finden.

search-config
loading …

Abstract

Parallel magnetic resonance imaging (MRI) is an imaging technique by acquiring a reduced amount of data in Fourier domain with multiple receiver coils. To recover the underlying imaging object, one often needs the explicit knowledge of coil sensitivity maps, or some additional fully acquired data blocks called the auto-calibration signals (ACS). In this paper, we show that by exploiting the between-frame redundancy of dynamic parallel MRI data, it is possible to achieve simultaneous coil sensitivity map estimation and image sequence reconstruction. Specially, we introduce a novel two-stage approach for dynamic parallel MRI reconstruction without pre-calibrating the coil sensitivity maps nor additionally acquiring any fully sampled ACS. Numerical experiments demonstrate that, the performance of the proposed approach is better than other state-of-the-art approaches for calibrationless dynamic parallel MRI reconstruction.

Sie haben noch keine Lizenz? Dann Informieren Sie sich jetzt über unsere Produkte:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Fußnoten
2
One might intuitively think that the the data frame with maximum number of samples in the auto-calibration region should be the best choice, but that is not true. For instance, in the second experiment of Sect. 5, the data frame with maximum number of samples in the auto-calibration region is frame 13, while exhaustive enumeration suggests frame 2 is the best choice, and the later one leads to significantly lower reconstruction error compared with the former one.
 
Literatur
1.
Zurück zum Zitat Beck, A., Teboulle, M.: A fast iterative shrinkage-thresholding algorithm for linear inverse problems. SIAM J. Imaging Sci. 2(1), 183–202 (2009)MathSciNetCrossRefMATH Beck, A., Teboulle, M.: A fast iterative shrinkage-thresholding algorithm for linear inverse problems. SIAM J. Imaging Sci. 2(1), 183–202 (2009)MathSciNetCrossRefMATH
2.
Zurück zum Zitat Cai, J.-F., Candès, E.J., Shen, Z.: A singular value thresholding algorithm for matrix completion. SIAM J. Optim. 20(4), 1956–1982 (2010)MathSciNetCrossRefMATH Cai, J.-F., Candès, E.J., Shen, Z.: A singular value thresholding algorithm for matrix completion. SIAM J. Optim. 20(4), 1956–1982 (2010)MathSciNetCrossRefMATH
3.
Zurück zum Zitat Chandrasekaran, V., Sanghavi, S., Parrilo, P., Willsky, A.S., et al.: Sparse and low-rank matrix decompositions. In: 47th Annual Allerton Conference on Communication, Control, and Computing, 2009. Allerton 2009, pp. 962–967. IEEE (2009) Chandrasekaran, V., Sanghavi, S., Parrilo, P., Willsky, A.S., et al.: Sparse and low-rank matrix decompositions. In: 47th Annual Allerton Conference on Communication, Control, and Computing, 2009. Allerton 2009, pp. 962–967. IEEE (2009)
4.
Zurück zum Zitat Combettes, P.L., Wajs, V.R.: Signal recovery by proximal forward–backward splitting. Multiscale Model.Simul. 4(4), 1168–1200 (2005)MathSciNetCrossRefMATH Combettes, P.L., Wajs, V.R.: Signal recovery by proximal forward–backward splitting. Multiscale Model.Simul. 4(4), 1168–1200 (2005)MathSciNetCrossRefMATH
5.
Zurück zum Zitat Daubechies, I., Defrise, M., De Mol, C.: An iterative thresholding algorithm for linear inverse problems with a sparsity constraint. Commun. Pure Appl. Math. 57(11), 1413–1457 (2004)MathSciNetCrossRefMATH Daubechies, I., Defrise, M., De Mol, C.: An iterative thresholding algorithm for linear inverse problems with a sparsity constraint. Commun. Pure Appl. Math. 57(11), 1413–1457 (2004)MathSciNetCrossRefMATH
6.
Zurück zum Zitat Ding, Q., Zan, Y., Huang, Q., Zhang, X.: Dynamic SPECT reconstruction from few projections: a sparsity enforced matrix factorization approach. Inverse Probl 31(2), 025004 (2015)MathSciNetCrossRefMATH Ding, Q., Zan, Y., Huang, Q., Zhang, X.: Dynamic SPECT reconstruction from few projections: a sparsity enforced matrix factorization approach. Inverse Probl 31(2), 025004 (2015)MathSciNetCrossRefMATH
7.
Zurück zum Zitat Gao, H., Lin, H., Ahn, C.B., Nalcioglu, O.: PRISM: A divide-and-conquer low-rank and sparse decomposition model for dynamic MRI. UCLA CAM Report (2011) Gao, H., Lin, H., Ahn, C.B., Nalcioglu, O.: PRISM: A divide-and-conquer low-rank and sparse decomposition model for dynamic MRI. UCLA CAM Report (2011)
8.
Zurück zum Zitat Gao, H., Rapacchi, S., Wang, D., Moriarty, J., Meehan, C., Sayre, J., Laub, G., Finn, P., Hu, P.: Compressed sensing using prior rank, intensity and sparsity model (PRISM): applications in cardiac cine MRI. In: Proceedings of the 20th Annual Meeting of ISMRM, Melbourne, Australia, pp. 2242 (2012) Gao, H., Rapacchi, S., Wang, D., Moriarty, J., Meehan, C., Sayre, J., Laub, G., Finn, P., Hu, P.: Compressed sensing using prior rank, intensity and sparsity model (PRISM): applications in cardiac cine MRI. In: Proceedings of the 20th Annual Meeting of ISMRM, Melbourne, Australia, pp. 2242 (2012)
9.
Zurück zum Zitat Griswold, M.A., Jakob, P.M., Heidemann, R.M., Nittka, M., Jellus, V., Wang, J., Kiefer, B., Haase, A.: Generalized autocalibrating partially parallel acquisitions (GRAPPA). Magn. Reson. Med. 47(6), 1202–1210 (2002)CrossRef Griswold, M.A., Jakob, P.M., Heidemann, R.M., Nittka, M., Jellus, V., Wang, J., Kiefer, B., Haase, A.: Generalized autocalibrating partially parallel acquisitions (GRAPPA). Magn. Reson. Med. 47(6), 1202–1210 (2002)CrossRef
10.
Zurück zum Zitat Huang, F., Akao, J., Vijayakumar, S., Duensing, G.R., Limkeman, M.: k–t GRAPPA: a k-space implementation for dynamic MRI with high reduction factor. Magn. Reson. Med. 54(5), 1172–1184 (2005)CrossRef Huang, F., Akao, J., Vijayakumar, S., Duensing, G.R., Limkeman, M.: k–t GRAPPA: a k-space implementation for dynamic MRI with high reduction factor. Magn. Reson. Med. 54(5), 1172–1184 (2005)CrossRef
11.
Zurück zum Zitat Kreutz-Delgado, K.: The complex gradient operator and the cr-calculus. University of California, San Diego, version ucsd-ece275cg-s2009v1. 0, 25 june 2009. arXiv:0906.4835 Kreutz-Delgado, K.: The complex gradient operator and the cr-calculus. University of California, San Diego, version ucsd-ece275cg-s2009v1. 0, 25 june 2009. arXiv:​0906.​4835
12.
Zurück zum Zitat Liang, D., DiBella, E.V., Chen, R.-R., Ying, L.: k-t ISD: Dynamic cardiac MR imaging using compressed sensing with iterative support detection. Magn. Reson. Med. 68(1), 41–53 (2012)CrossRef Liang, D., DiBella, E.V., Chen, R.-R., Ying, L.: k-t ISD: Dynamic cardiac MR imaging using compressed sensing with iterative support detection. Magn. Reson. Med. 68(1), 41–53 (2012)CrossRef
13.
Zurück zum Zitat Liang, D., Liu, B., Wang, J., Ying, L.: Accelerating SENSE using compressed sensing. Magn. Reson. Med. 62(6), 1574–1584 (2009)CrossRef Liang, D., Liu, B., Wang, J., Ying, L.: Accelerating SENSE using compressed sensing. Magn. Reson. Med. 62(6), 1574–1584 (2009)CrossRef
14.
Zurück zum Zitat Liang, Z.-P.: Spatiotemporal imaging with partially separable functions. In: Joint Meeting of the 6th International Symposium on Noninvasive Functional Source Imaging of the Brain and Heart and the International Conference on Functional Biomedical Imaging, 2007. NFSI-ICFBI 2007, pp. 181–182. IEEE (2007) Liang, Z.-P.: Spatiotemporal imaging with partially separable functions. In: Joint Meeting of the 6th International Symposium on Noninvasive Functional Source Imaging of the Brain and Heart and the International Conference on Functional Biomedical Imaging, 2007. NFSI-ICFBI 2007, pp. 181–182. IEEE (2007)
15.
Zurück zum Zitat Lustig, M., Donoho, D., Pauly, J.M.: Sparse mri: the application of compressed sensing for rapid MR imaging. Magn. Reson. Med 58(6), 1182–1195 (2007)CrossRef Lustig, M., Donoho, D., Pauly, J.M.: Sparse mri: the application of compressed sensing for rapid MR imaging. Magn. Reson. Med 58(6), 1182–1195 (2007)CrossRef
16.
Zurück zum Zitat Lustig, M., Pauly, J.M.: SPIRiT: Iterative self-consistent parallel imaging reconstruction from arbitrary k-space. Magn. Reson. Med. 64(2), 457–471 (2010) Lustig, M., Pauly, J.M.: SPIRiT: Iterative self-consistent parallel imaging reconstruction from arbitrary k-space. Magn. Reson. Med. 64(2), 457–471 (2010)
17.
Zurück zum Zitat Otazo, R., Candès, E., Sodickson, D.K.: Low-rank plus sparse matrix decomposition for accelerated dynamic MRI with separation of background and dynamic components. Magn. Reson. Med. 73(3), 1125–1136 (2015)CrossRef Otazo, R., Candès, E., Sodickson, D.K.: Low-rank plus sparse matrix decomposition for accelerated dynamic MRI with separation of background and dynamic components. Magn. Reson. Med. 73(3), 1125–1136 (2015)CrossRef
18.
Zurück zum Zitat Pruessmann, K.P., Weiger, M., Scheidegger, M.B., Boesiger, P.: SENSE: sensitivity encoding for fast MRI. Magn. Reson. Med. 42, 952–962 (1999)CrossRef Pruessmann, K.P., Weiger, M., Scheidegger, M.B., Boesiger, P.: SENSE: sensitivity encoding for fast MRI. Magn. Reson. Med. 42, 952–962 (1999)CrossRef
19.
Zurück zum Zitat Shen, Z., Toh, K.-C., Yun, S.: An accelerated proximal gradient algorithm for frame-based image restoration via the balanced approach. SIAM J. Imaging Sci. 4(2), 573–596 (2011)MathSciNetCrossRefMATH Shen, Z., Toh, K.-C., Yun, S.: An accelerated proximal gradient algorithm for frame-based image restoration via the balanced approach. SIAM J. Imaging Sci. 4(2), 573–596 (2011)MathSciNetCrossRefMATH
20.
Zurück zum Zitat Shin, P.J., Larson, P.E., Ohliger, M.A., Elad, M., Pauly, J.M., Vigneron, D.B., Lustig, M.: Calibrationless parallel imaging reconstruction based on structured low-rank matrix completion. Magn. Reson. Med. 72(4), 959–970 (2014)CrossRef Shin, P.J., Larson, P.E., Ohliger, M.A., Elad, M., Pauly, J.M., Vigneron, D.B., Lustig, M.: Calibrationless parallel imaging reconstruction based on structured low-rank matrix completion. Magn. Reson. Med. 72(4), 959–970 (2014)CrossRef
21.
Zurück zum Zitat Sodickson, D.K., Manning, W.J.: Simultaneous acquisition of spatial harmonics (SMASH): fast imaging with radiofrequency coil arrays. Magn. Reson. Med. 38(4), 591–603 (1997)CrossRef Sodickson, D.K., Manning, W.J.: Simultaneous acquisition of spatial harmonics (SMASH): fast imaging with radiofrequency coil arrays. Magn. Reson. Med. 38(4), 591–603 (1997)CrossRef
22.
Zurück zum Zitat Uecker, M., Lai, P., Murphy, M.J., Virtue, P., Elad, M., Pauly, J.M., Vasanawala, S.S., Lustig, M.: ESPIRiT—an eigenvalue approach to autocalibrating parallel MRI: where SENSE meets GRAPPA. Magn. Reson. Med. 71(3), 990–1001 (2014)CrossRef Uecker, M., Lai, P., Murphy, M.J., Virtue, P., Elad, M., Pauly, J.M., Vasanawala, S.S., Lustig, M.: ESPIRiT—an eigenvalue approach to autocalibrating parallel MRI: where SENSE meets GRAPPA. Magn. Reson. Med. 71(3), 990–1001 (2014)CrossRef
23.
Zurück zum Zitat Wang, J., Kluge, T., Nittka, M., Jellus, V., Kuhn, B., Kiefer, B.: Using reference lines to improve the SNR of mSENSE. In: Proceedings of the 10th Annual Meeting of ISMRM, Honolulu, p. 2392 (2002) Wang, J., Kluge, T., Nittka, M., Jellus, V., Kuhn, B., Kiefer, B.: Using reference lines to improve the SNR of mSENSE. In: Proceedings of the 10th Annual Meeting of ISMRM, Honolulu, p. 2392 (2002)
24.
Zurück zum Zitat Zhao, T., Hu, X.: Iterative GRAPPA (iGRAPPA) for improved parallel imaging reconstruction. Magn. Reson. Med. 59(4), 903–907 (2008)CrossRef Zhao, T., Hu, X.: Iterative GRAPPA (iGRAPPA) for improved parallel imaging reconstruction. Magn. Reson. Med. 59(4), 903–907 (2008)CrossRef
Metadaten
Titel
A Two-Stage Low Rank Approach for Calibrationless Dynamic Parallel Magnetic Resonance Image Reconstruction
verfasst von
Likun Hou
Hao Gao
Xiaoqun Zhang
Publikationsdatum
04.06.2016
Verlag
Springer US
Erschienen in
Journal of Scientific Computing / Ausgabe 3/2016
Print ISSN: 0885-7474
Elektronische ISSN: 1573-7691
DOI
https://doi.org/10.1007/s10915-016-0225-6

Weitere Artikel der Ausgabe 3/2016

Journal of Scientific Computing 3/2016 Zur Ausgabe