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2017 | Supplement | Buchkapitel

Data-Driven Rank Aggregation with Application to Grand Challenges

verfasst von : James Fishbaugh, Marcel Prastawa, Bo Wang, Patrick Reynolds, Stephen Aylward, Guido Gerig

Erschienen in: Medical Image Computing and Computer-Assisted Intervention − MICCAI 2017

Verlag: Springer International Publishing

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Abstract

The increased number of challenges for comparative evaluation of biomedical image analysis procedures clearly reflects a need for unbiased assessment of the state-of-the-art methodological advances. Moreover, the ultimate translation of novel image analysis procedures to the clinic requires rigorous validation and evaluation of alternative schemes, a task that is best outsourced to the international research community. We commonly see an increase of the number of metrics to be used in parallel, reflecting alternative ways to measure similarity. Since different measures come with different scales and distributions, these are often normalized or converted into an individual rank ordering, leaving the problem of combining the set of multiple rankings into a final score. Proposed solutions are averaging or accumulation of rankings, raising the question if different metrics are to be treated the same or if all metrics would be needed to assess closeness to truth. We address this issue with a data-driven method for automatic estimation of weights for a set of metrics based on unsupervised rank aggregation. Our method requires no normalization procedures and makes no assumptions about metric distributions. We explore the sensitivity of metrics to small changes in input data with an iterative perturbation scheme, to prioritize the contribution of the most robust metrics in the overall ranking. We show on real anatomical data that our weighting scheme can dramatically change the ranking.

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Literatur
1.
Zurück zum Zitat Menze, B.H., Jakab, A., Bauer, S., Kalpathy-Cramer, J., Farahani, K., Kirby, J., Burren, Y., Porz, N., Slotboom, J., Wiest, R., et al.: The multimodal brain tumor image segmentation benchmark (BRATS). IEEE Trans. Med. Imaging 34(10), 1993–2024 (2015)CrossRef Menze, B.H., Jakab, A., Bauer, S., Kalpathy-Cramer, J., Farahani, K., Kirby, J., Burren, Y., Porz, N., Slotboom, J., Wiest, R., et al.: The multimodal brain tumor image segmentation benchmark (BRATS). IEEE Trans. Med. Imaging 34(10), 1993–2024 (2015)CrossRef
2.
Zurück zum Zitat Pujol, S., Wells, W., Pierpaoli, C., Brun, C., Gee, J., Cheng, G., Vemuri, B., Commowick, O., Prima, S., et al.: The DTI challenge: toward standardized evaluation of diffusion tensor imaging tractography for neurosurgery. J. Neuroimaging 25(6), 875–882 (2015)CrossRef Pujol, S., Wells, W., Pierpaoli, C., Brun, C., Gee, J., Cheng, G., Vemuri, B., Commowick, O., Prima, S., et al.: The DTI challenge: toward standardized evaluation of diffusion tensor imaging tractography for neurosurgery. J. Neuroimaging 25(6), 875–882 (2015)CrossRef
3.
Zurück zum Zitat Russakovsky, O., Deng, J., Su, H., Krause, J., Satheesh, S., Ma, S., Huang, Z., Karpathy, A., Khosla, A., Bernstein, M., Berg, A.C., Fei-Fei, L.: ImageNet large scale visual recognition challenge. Int. J. Comput. Vis. 115(3), 211–252 (2015)MathSciNetCrossRef Russakovsky, O., Deng, J., Su, H., Krause, J., Satheesh, S., Ma, S., Huang, Z., Karpathy, A., Khosla, A., Bernstein, M., Berg, A.C., Fei-Fei, L.: ImageNet large scale visual recognition challenge. Int. J. Comput. Vis. 115(3), 211–252 (2015)MathSciNetCrossRef
4.
Zurück zum Zitat Warfield, S., Zou, K., Wells, W.: Simultaneous truth and performance level estimation (staple): an algorithm for the validation of image segmentation. IEEE Trans. Med. Imaging 23(7), 903–921 (2004)CrossRef Warfield, S., Zou, K., Wells, W.: Simultaneous truth and performance level estimation (staple): an algorithm for the validation of image segmentation. IEEE Trans. Med. Imaging 23(7), 903–921 (2004)CrossRef
5.
Zurück zum Zitat Klein, A., Andersson, J., Ardekani, B.A., Ashburner, J., Avants, B., Chiang, M.C., Christensen, G.E., Collins, D.L., Gee, J., Hellier, P., et al.: Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. Neuroimage 46(3), 786–802 (2009)CrossRef Klein, A., Andersson, J., Ardekani, B.A., Ashburner, J., Avants, B., Chiang, M.C., Christensen, G.E., Collins, D.L., Gee, J., Hellier, P., et al.: Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. Neuroimage 46(3), 786–802 (2009)CrossRef
6.
Zurück zum Zitat Gouttard, S., Goodlett, C.B., Kubicki, M., Gerig, G.: Measures for validation of DTI tractography. In: SPIE Medical Imaging, ISOP, p. 83140J (2012) Gouttard, S., Goodlett, C.B., Kubicki, M., Gerig, G.: Measures for validation of DTI tractography. In: SPIE Medical Imaging, ISOP, p. 83140J (2012)
7.
Zurück zum Zitat Taha, A.A., Hanbury, A., del Toro, O.A.J.: A formal method for selecting evaluation metrics for image segmentation. In: ICIP, pp. 932–936. IEEE (2014) Taha, A.A., Hanbury, A., del Toro, O.A.J.: A formal method for selecting evaluation metrics for image segmentation. In: ICIP, pp. 932–936. IEEE (2014)
8.
Zurück zum Zitat Klementiev, A., Roth, D., Small, K.: An unsupervised learning algorithm for rank aggregation. In: Kok, J.N., Koronacki, J., Mantaras, R.L., Matwin, S., Mladenič, D., Skowron, A. (eds.) ECML 2007. LNCS, vol. 4701, pp. 616–623. Springer, Heidelberg (2007). doi:10.1007/978-3-540-74958-5_60CrossRef Klementiev, A., Roth, D., Small, K.: An unsupervised learning algorithm for rank aggregation. In: Kok, J.N., Koronacki, J., Mantaras, R.L., Matwin, S., Mladenič, D., Skowron, A. (eds.) ECML 2007. LNCS, vol. 4701, pp. 616–623. Springer, Heidelberg (2007). doi:10.​1007/​978-3-540-74958-5_​60CrossRef
9.
Zurück zum Zitat Taha, A.A., Hanbury, A.: Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool. BMC Med. Imaging 15(1), 29 (2015)CrossRef Taha, A.A., Hanbury, A.: Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool. BMC Med. Imaging 15(1), 29 (2015)CrossRef
10.
Zurück zum Zitat Yushkevich, P., Piven, J., Cody, H., Ho, S., Gee, J.C., Gerig, G.: User-guided level set segmentation of anatomical structures with ITK-SNAP. NeuroImage 31, 1116–1128 (2005)CrossRef Yushkevich, P., Piven, J., Cody, H., Ho, S., Gee, J.C., Gerig, G.: User-guided level set segmentation of anatomical structures with ITK-SNAP. NeuroImage 31, 1116–1128 (2005)CrossRef
11.
Zurück zum Zitat Vachet, C., Yvernault, B., Bhatt, K., Smith, R.G., Gerig, G., Hazlett, H.C., Styner, M.: Automatic corpus callosum segmentation using a deformable active Fourier contour model. In: SPIE Medical Imaging, ISOP, p. 831707 (2012) Vachet, C., Yvernault, B., Bhatt, K., Smith, R.G., Gerig, G., Hazlett, H.C., Styner, M.: Automatic corpus callosum segmentation using a deformable active Fourier contour model. In: SPIE Medical Imaging, ISOP, p. 831707 (2012)
Metadaten
Titel
Data-Driven Rank Aggregation with Application to Grand Challenges
verfasst von
James Fishbaugh
Marcel Prastawa
Bo Wang
Patrick Reynolds
Stephen Aylward
Guido Gerig
Copyright-Jahr
2017
DOI
https://doi.org/10.1007/978-3-319-66185-8_85