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2016 | OriginalPaper | Buchkapitel

Eidolon: Visualization and Computational Framework for Multi-modal Biomedical Data Analysis

verfasst von : Eric Kerfoot, Lauren Fovargue, Simone Rivolo, Wenzhe Shi, Daniel Rueckert, David Nordsletten, Jack Lee, Radomir Chabiniok, Reza Razavi

Erschienen in: Medical Imaging and Augmented Reality

Verlag: Springer International Publishing

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Abstract

Biomedical research, combining multi-modal image and geometry data, presents unique challenges for data visualization, processing, and quantitative analysis. Medical imaging provides rich information, from anatomical to deformation, but extracting this to a coherent picture across image modalities with preserved quality is not trivial. Addressing these challenges and integrating visualization with image and quantitative analysis results in Eidolon, a platform which can adapt to rapidly changing research workflows. In this paper we outline Eidolon, a software environment aimed at addressing these challenges, and discuss the novel integration of visualization and analysis components. These capabilities are demonstrated through the example of cardiac strain analysis, showing the Eidolon supports and enhances the workflow.

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Literatur
1.
Zurück zum Zitat Chandrashekara, R., Mohiaddin, R.H., Rueckert, D.: Analysis of 3D myocardial motion in tagged MR images using nonrigid image registration. IEEE Trans. Med. Imaging 23(10), 1245–1250 (2004)CrossRef Chandrashekara, R., Mohiaddin, R.H., Rueckert, D.: Analysis of 3D myocardial motion in tagged MR images using nonrigid image registration. IEEE Trans. Med. Imaging 23(10), 1245–1250 (2004)CrossRef
2.
Zurück zum Zitat Cullip, T.J., Neumann, U.: Accelerating volume reconstruction with 3D texture hardware. Technical report, Chapel Hill, NC, USA (1994) Cullip, T.J., Neumann, U.: Accelerating volume reconstruction with 3D texture hardware. Technical report, Chapel Hill, NC, USA (1994)
3.
Zurück zum Zitat Groth, A., Weese, J., Lehmann, H.: Robust left ventricular myocardium segmentation for multi-protocol MR. In: Medical Imaging 2012: Image Processing, vol. 8314, p. 83142S, February 2012 Groth, A., Weese, J., Lehmann, H.: Robust left ventricular myocardium segmentation for multi-protocol MR. In: Medical Imaging 2012: Image Processing, vol. 8314, p. 83142S, February 2012
4.
Zurück zum Zitat Hibbard, W., Santek, D.: Interactivity is the key. In: Proceedings of the 1989 Chapel Hill Workshop on Volume Visualization, VVS 1989, pp. 39–43. ACM, New York (1989) Hibbard, W., Santek, D.: Interactivity is the key. In: Proceedings of the 1989 Chapel Hill Workshop on Volume Visualization, VVS 1989, pp. 39–43. ACM, New York (1989)
5.
Zurück zum Zitat Keenan, N.G., Pennell, D.J.: CMR of ventricular function. Echocardiography 24(2), 185–193 (2007)CrossRef Keenan, N.G., Pennell, D.J.: CMR of ventricular function. Echocardiography 24(2), 185–193 (2007)CrossRef
6.
Zurück zum Zitat Kruger, J., Westermann, R.: Acceleration techniques for GPU-based volume rendering. In: Proceedings of the 14th IEEE Visualization 2003 (VIS 2003), p. 38. IEEE Computer Society, Washington, DC (2003) Kruger, J., Westermann, R.: Acceleration techniques for GPU-based volume rendering. In: Proceedings of the 14th IEEE Visualization 2003 (VIS 2003), p. 38. IEEE Computer Society, Washington, DC (2003)
7.
Zurück zum Zitat Mark, W.R., Glanville, R.S., Akeley, K., Kilgard, M.J.: Cg: a system for programming graphics hardware in a C-like language. ACM Trans. Graph. 22(3), 896–907 (2003)CrossRef Mark, W.R., Glanville, R.S., Akeley, K., Kilgard, M.J.: Cg: a system for programming graphics hardware in a C-like language. ACM Trans. Graph. 22(3), 896–907 (2003)CrossRef
8.
Zurück zum Zitat Rueckert, D., Sonoda, L.I., Hayes, C., Hill, D.L., Leach, M.O., Hawkes, D.J.: Nonrigid registration using free-form deformations: application to breast MR images. IEEE Trans. Med. Imaging 18(8), 712–721 (1999)CrossRef Rueckert, D., Sonoda, L.I., Hayes, C., Hill, D.L., Leach, M.O., Hawkes, D.J.: Nonrigid registration using free-form deformations: application to breast MR images. IEEE Trans. Med. Imaging 18(8), 712–721 (1999)CrossRef
9.
Zurück zum Zitat Rutz, A., Ryf, S., Plein, S., Boesiger, P., Kozerke, S.: Accelerated whole-heart 3D CSPAMM for myocardial motion quantification. Magn. Reson. Med. 59, 755–763 (2008)CrossRef Rutz, A., Ryf, S., Plein, S., Boesiger, P., Kozerke, S.: Accelerated whole-heart 3D CSPAMM for myocardial motion quantification. Magn. Reson. Med. 59, 755–763 (2008)CrossRef
10.
Zurück zum Zitat Scharsach, H.: Advanced GPU raycasting. In: Proceedings of CESCG 2005, pp. 69–76 (2005) Scharsach, H.: Advanced GPU raycasting. In: Proceedings of CESCG 2005, pp. 69–76 (2005)
11.
Zurück zum Zitat Shi, W., Zhuang, X., Wang, H., Duckett, S., Luong, D., Tobon-Gomez, C., Tung, K., Edwards, P., Rhode, K., Razavi, R., Ourselin, S., Rueckert, D.: A comprehensive cardiac motion estimation framework using both untagged and 3D tagged MR images based on non-rigid registration. IEEE Trans. Med. Imaging 31(6), 1263–1275 (2012)CrossRef Shi, W., Zhuang, X., Wang, H., Duckett, S., Luong, D., Tobon-Gomez, C., Tung, K., Edwards, P., Rhode, K., Razavi, R., Ourselin, S., Rueckert, D.: A comprehensive cardiac motion estimation framework using both untagged and 3D tagged MR images based on non-rigid registration. IEEE Trans. Med. Imaging 31(6), 1263–1275 (2012)CrossRef
12.
Zurück zum Zitat Studholme, C., Hill, D., Hawkes, D.: An overlap invariant entropy measure of 3D medical image alignment. Pattern Recogn. 32(1), 71–86 (1999)CrossRef Studholme, C., Hill, D., Hawkes, D.: An overlap invariant entropy measure of 3D medical image alignment. Pattern Recogn. 32(1), 71–86 (1999)CrossRef
13.
Zurück zum Zitat Walsh, T.F., Hundley, W.G.: Assessment of ventricular function with cardiovascular magnetic resonance. Magn. Reson. Imaging Clin. N. Am. 15(4), 487–504 (2007)CrossRef Walsh, T.F., Hundley, W.G.: Assessment of ventricular function with cardiovascular magnetic resonance. Magn. Reson. Imaging Clin. N. Am. 15(4), 487–504 (2007)CrossRef
Metadaten
Titel
Eidolon: Visualization and Computational Framework for Multi-modal Biomedical Data Analysis
verfasst von
Eric Kerfoot
Lauren Fovargue
Simone Rivolo
Wenzhe Shi
Daniel Rueckert
David Nordsletten
Jack Lee
Radomir Chabiniok
Reza Razavi
Copyright-Jahr
2016
DOI
https://doi.org/10.1007/978-3-319-43775-0_39