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2018 | OriginalPaper | Buchkapitel

Elastic Registration of Single Subject Task Based fMRI Signals

verfasst von : David S. Lee, Joana Loureiro, Katherine L. Narr, Roger P. Woods, Shantanu H. Joshi

Erschienen in: Medical Image Computing and Computer Assisted Intervention – MICCAI 2018

Verlag: Springer International Publishing

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Abstract

Single subject task-based fMRI analyses generally suffer from low detection sensitivity with parameter estimates from the general linear model (GLM) lying below the significance threshold especially for similar contrasts or conditions. In this paper, we present a shape-based approach for alignment of condition-specific time course activity for single subject task-based fMRI. Our approach extracts signals for each condition from the entire time course, constructs an unbiased average of those signals, and warps each signal to the mean. As the warping is diffeomorphic, nonlinear and allows large deformations of time series if required, we term this approach as elastic functional registration. On a single subject level, our method significantly detects more clusters and more activated voxels in relevant subcortical regions in healthy controls.

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Literatur
1.
Zurück zum Zitat Chai, X.J., et al.: Functional and structural brain correlates of risk for major depression in children with familial depression. NeuroImage Clin. 8, 398–407 (2015)CrossRef Chai, X.J., et al.: Functional and structural brain correlates of risk for major depression in children with familial depression. NeuroImage Clin. 8, 398–407 (2015)CrossRef
2.
Zurück zum Zitat Fischl, B., et al.: Automatically parcellating the human cerebral cortex. Cereb. Cortex 14(1), 11–22 (2004)CrossRef Fischl, B., et al.: Automatically parcellating the human cerebral cortex. Cereb. Cortex 14(1), 11–22 (2004)CrossRef
3.
Zurück zum Zitat Glover, G.H.: Overview of functional magnetic resonance imaging. Neurosurg. Clin. 22(2), 133–139 (2011)CrossRef Glover, G.H.: Overview of functional magnetic resonance imaging. Neurosurg. Clin. 22(2), 133–139 (2011)CrossRef
4.
Zurück zum Zitat Guntupalli, J.S., Hanke, M., Halchenko, Y.O., Connolly, A.C., Ramadge, P.J., Haxby, J.V.: A model of representational spaces in human cortex. Cereb. Cortex 26(6), 2919–2934 (2016)CrossRef Guntupalli, J.S., Hanke, M., Halchenko, Y.O., Connolly, A.C., Ramadge, P.J., Haxby, J.V.: A model of representational spaces in human cortex. Cereb. Cortex 26(6), 2919–2934 (2016)CrossRef
5.
Zurück zum Zitat Joshi, A.A., Chong, M., Li, J., Choi, S., Leahy, R.M.: Are you thinking what i’m thinking? Synchronization of resting fMRI time-series across subjects. NeuroImage 172, 740–752 (2018)CrossRef Joshi, A.A., Chong, M., Li, J., Choi, S., Leahy, R.M.: Are you thinking what i’m thinking? Synchronization of resting fMRI time-series across subjects. NeuroImage 172, 740–752 (2018)CrossRef
6.
Zurück zum Zitat Joshi, S.H., Klassen, E., Srivastava, A., Jermyn, I.: A novel representation for Riemannian analysis of elastic curves in \(R^n\). In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR), pp. 1–7. IEEE (2007) Joshi, S.H., Klassen, E., Srivastava, A., Jermyn, I.: A novel representation for Riemannian analysis of elastic curves in \(R^n\). In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR), pp. 1–7. IEEE (2007)
7.
Zurück zum Zitat Joshi, S.H., Klassen, E., Srivastava, A., Jermyn, I.: Removing shape-preserving transformations in square-root elastic (SRE) framework for shape analysis of curves. In: Yuille, A.L., Zhu, S.-C., Cremers, D., Wang, Y. (eds.) EMMCVPR 2007. LNCS, vol. 4679, pp. 387–398. Springer, Heidelberg (2007). https://doi.org/10.1007/978-3-540-74198-5_30CrossRef Joshi, S.H., Klassen, E., Srivastava, A., Jermyn, I.: Removing shape-preserving transformations in square-root elastic (SRE) framework for shape analysis of curves. In: Yuille, A.L., Zhu, S.-C., Cremers, D., Wang, Y. (eds.) EMMCVPR 2007. LNCS, vol. 4679, pp. 387–398. Springer, Heidelberg (2007). https://​doi.​org/​10.​1007/​978-3-540-74198-5_​30CrossRef
8.
Zurück zum Zitat Karcher, H.: Riemannian center of mass and mollifier smoothing. Commun. Pure Appl. Math. 30, 509–541 (1977)MathSciNetCrossRef Karcher, H.: Riemannian center of mass and mollifier smoothing. Commun. Pure Appl. Math. 30, 509–541 (1977)MathSciNetCrossRef
9.
10.
Zurück zum Zitat Meszlényi, R.J., Hermann, P., Buza, K., Gál, V., Vidnyánszky, Z.: Resting state fMRI functional connectivity analysis using dynamic time warping. Front. Neurosci. 11, 75 (2017)CrossRef Meszlényi, R.J., Hermann, P., Buza, K., Gál, V., Vidnyánszky, Z.: Resting state fMRI functional connectivity analysis using dynamic time warping. Front. Neurosci. 11, 75 (2017)CrossRef
11.
Zurück zum Zitat Smith, S.M., et al.: Advances in functional and structural mr image analysis and implementation as FSL. Neuroimage 23, S208–S219 (2004)CrossRef Smith, S.M., et al.: Advances in functional and structural mr image analysis and implementation as FSL. Neuroimage 23, S208–S219 (2004)CrossRef
12.
Zurück zum Zitat Srivastava, A., Wu, W., Kurtek, S., Klassen, E., Marron, J.S.: Registration of functional data using Fisher-Rao metric. arXiv:1103.3817v2 (2011) Srivastava, A., Wu, W., Kurtek, S., Klassen, E., Marron, J.S.: Registration of functional data using Fisher-Rao metric. arXiv:​1103.​3817v2 (2011)
Metadaten
Titel
Elastic Registration of Single Subject Task Based fMRI Signals
verfasst von
David S. Lee
Joana Loureiro
Katherine L. Narr
Roger P. Woods
Shantanu H. Joshi
Copyright-Jahr
2018
DOI
https://doi.org/10.1007/978-3-030-00931-1_18