Skip to main content
Disciplines
Automotive Business IT + Informatics Construction + Real Estate Electrical Engineering + Electronics Energy + Sustainability Insurance + Risk Finance + Banking Management + Leadership Marketing + Sales Mechanical Engineering + Materials
Events
DE
EN
Books
Journals
Topic Page
Marketing
Start single access now
Access for companies
EXTENDED SEARCH
Log in
Top
Published in:
Concentration-Encoded Molecular Communication in Nanonetworks. Part 1: Fundamentals, Issues, and Challenges Read chapter Read first chapter

2017 | OriginalPaper | Chapter

An Architecture of Calcium Signaling for Molecular Communication Based Nano Network

Authors : Amitava Mukherjee, Sushovan Das, Soumallya Chatterjee

Published in: Modeling, Methodologies and Tools for Molecular and Nano-scale Communications

Publisher: Springer International Publishing

Log in

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

The Nobel laureate physicist Richard Feynman, in his famous speech in 1959 entitled “There’s Plenty of Room at the Bottom”, has pointed out the concepts in nanotechnology and described how the manipulation of individual atoms and molecules would give rise to more functional and powerful man-made devices.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

inform now

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

inform now

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

inform now
previous chapter Understanding Communication via Diffusion: Simulation Design and Intricacies
next chapter On Regulation of Neuro-spike Communication for Healthy Brain
Literature
1.
Akyildiz IF, Jornet JM, Pierobon M (2011) Nanonetworks: a new frontier in communications. CACM, 54(11):84–87
2.
Akyildiz Ian F, Brunetti F, Blázquez C (2008) “Nanonetworks: A new communication paradigm”. Comput Netw 52:2260–2279CrossRef
3.
Moore MJ, Suda T, Oiwa K (2009) Molecular communication: modeling noise effects on information rate. IEEE Trans Nanobioscience 8(2):169–180CrossRef
4.
Berridge MJ, Lipp P, Bootman MD (2000) The versatility and universality of calcium signalling. Nat Rev Mol Cell Biol 1:11–21
5.
Guney A, Atakan B, Akan OB (2012) Mobile ad hoc nanonetworks with collision-based molecular communication. IEEE Trans Mob Comput 11(3)
6.
Visscher K, Schnitzer MJ, Block SM (1999) Single kinesin molecules studied with a molecular force clamp. Nature 400:184–189CrossRef
7.
Berridge MJ (1997) The AM and FM of calcium signaling. Nature 386:756–780
8.
Parcerisa Ll (2009) Molecular communication options for long range nanonetworks. Master’s Thesis, School of Electrical and Computer Engineering, Georgia Institute of Technology
9.
Jornet JM, Akyildiz IF (2011) Channel modeling and capacity analysis for electromagnetic wireless nanonetworks in the terahertz band. IEEE Trans Wirel Commun 10(10):3211–3221CrossRef
10.
Akyildiz IF, Jornet JM (2010) Electromagnetic wirewless nanosensor networks. Nano Commun Netw 1:3–19
11.
12.
Chakraborty D (2013) Modeling the architecture of calcium signaling from the perspective of nanonetworks. Calcutta University, M. Tech. Thesis
13.
Chakraborty D, Mukherjee A, Sadhu S, Ray SS, Das S, Chatterjee S, Naskar MK (2013) Modeling the architecture of calcium signaling from the perspective of nanonetworks. ICC MONACOM. (accepted)
14.
Chakraborty D, Mukherjee A, Sadhu S, Chakraborty A, Das S, Chatterjee S, Naskar MK (2014) Physical channel study for calcium signaling based communication in nanonetworks. In: Globecom 2014—symposium on selected areas in communications: GC14 SAC nanotechnology (submitted)
15.
Wei G, Bogdan P, Marculescu R (2013) Efficient modeling and simulation of bacteria-based nanonetworks with BNSim. IEEE J Sel Areas Commun 31(12):868–878
16.
Wei G, Bogdan, P, Marculescu R (2013) Bumpy rides: modeling the dynamics of chemotactic interacting bacteria. IEEE J Sel Areas Commun 31(12):879–890
17.
Srinivas KV, Eckford AW, Adve RS (2012) Molecular communication in fluid media: the additive inverse gaussian noise channel. IEEE Trans Inf Theory 58(7):4678–4692MathSciNetCrossRef
18.
Clapham DE (2007) Calcium signaling, cell 131:1047–1058
19.
Bush F (Unpublished) Nanoscale communication network definition & framework. IEEE group P1906.1
20.
Berridge MJ, Lipp P, Bootman MD (2000) The versatility and universality of calcium signaling. Nat Rev Mol Cell Biol I:11–21CrossRef
21.
Bidaud I, Mezghrani A, Swayne LA, Monteil A, Lory P (2006) Voltage-gated calcium channel in genetic diseases. Biochem et Biophys Acta 1763:1169–1174CrossRef
22.
Vay L, SanMiguel EH, Santo-Domingo J, Lobaton D, Moreno A, Montero M, Alvarez J (2007) Modulation of Ca2+ release in HeLa cells and fibroblasts by mitochondrial Ca2+ uniporter stimulation. J Physiol 580(1):39–49CrossRef
23.
Mori Y, Peskin CS (2009) A numerical method for cellular electrophysiology based on the electrodiffusion equations with internal boundary conditions at membranes. Commun Appl Math Comput Sci 4(1):85–134MathSciNetCrossRefMATH
24.
Moore M, Enomoto A, Nakano T, Suda T, Kayasuga A, Kojima H, Sakakibara H, Oiwa K (2006) Simulation of a molecular motor based communication network
25.
Totha Á, Bánky D, Grolmusz V (2011) 3D Brownian motion simulator for high sensitivity nano-biotechnical applications. IEEE Trans Nano Biosci
26.
Llatser I, Pascual I, Garralda N, Cabellos-Aparicio A, Alarcon E (2011) N3 Sim: a simulation framework for diffusion-based molecular communication. IEEE Trans Nano Biosci
27.
Felicetti L, Femminella M, Reali G (2012) A simulation tool for nanoscale biological networks. J Nano Commun Netw 3:2–18. (Elsevier)
28.
Gul E, Atakan B, Akan OB (2010) NanoNS: a nanoscale network simulator framework for molecular communications. Nano Commun Netw I:138–156
29.
Garralda N, Llatser I, Cabellos-Aparicio A, Pierobony M (2011) Simulation-based evaluation of the diffusion-based physical channel in molecular nanonetworks. In: Proceedings of INFOCOM
30.
Chakraborty D, Mukherjee A, Sadhu S, Ray SS, Das S, Chatterjee S, Naskar MK (2013) Modeling the physical channel in the architecture of nanonetworks using molecular communication with Ca2+ signaling. IEEE Trans NanoBioscience. ((submitted), August 2013)
31.
Jornet JM, Pujol JC, Pareta JS (2012) PHLAME: a physical layer aware MAC protocol for electromagnetic nanonetworks in the terahertz band. Nano Commun Netw 3:74–81CrossRef
32.
Nakano T, Suda T, Moore M, Egashira R, Enomoto A, Arima K (2005) Molecular communication for nanomachines using intercellular calcium signaling. In: Proceedings of 2005 5th IEEE Conference on Nanotechnology, July 2005
33.
Clapham DE (2007) Calcium signaling. Cell 131, 1047–1058
34.
Chakraborty D, Mukherjee A, Sadhu S, Ray SS, Das S, Chatterjee S, Naskar MK (2013) Physical channel study for calcium signaling based communication in nanonetworks. IEEE, ICC’14. ((submitted), November, 2013)
35.
Leeson MS, Higgins MD (2012) Error correction coding for molecular communications. In: International workshop on molecular and nanoscale communications
36.
Moore MJ, Suda T, Oiwa K (2009) Molecular communication: modeling noise effects on information rate. IEEE Trans Nanobiosci 8(2):169–180CrossRef
37.
Leeson MS (2000) Performance analysis of direct detection spectrally sliced receivers using fabry-perot filters. J Lightwave Technol 18(1):13–25CrossRef
38.
Kuran MS, Birkan Yilmaz H, Tugcu T, Özerman B (2010) Energy model for communication via diffusion in nano networks. Nano Commun Netw 1(2):86–95CrossRef
39.
Costello DJ, Jr Hagenauer J, Imai JH, Wicker SB (1998) Applications of error-control coding. IEEE Trans Inf Theory 44(6):2531–2560
40.
Wang X, Song J, Liu J, Wang ZL (2007) Direct-current nanogenerator driven by ultrasonic waves. Science 316(5821):102–105CrossRef
41.
Moon TK (2005) Error correction coding: mathematical methods and algorithms. Wiley, New York, NY. (Chapter 14)
42.
43.
Nakano T, Suda T, Koujin T, Haraguchi T, Hiraoka Y (2007) Molecular communication through gap junction channels: system design, experiments and modeling. In: Bionetics’07. Budapest, Hungary. (December 10–13, 2007)
44.
Akyildiz IF, Jornet JM (2010) Graphene-based nano-antennas for electromagnetic nanocommunicationsin the terahertz band. In: Proceedings of 4th european conference on antennas and propagation, EUCAP, pp. 1–5. (April 2010)
45.
Rosenau da Costa M, Kibis OV, Portnoi ME (2009) Carbon nanotubes as a basis for terahertz emitters and detectors. Microelectron J 40(4–5):776–778CrossRef
46.
Zhou G, Yang M, Xiao X, Li Y (2003) Electronic transport in a quantum wire under external terahertz electromagnetic irradiation. Phys Rev B 68(15):155309CrossRef
47.
Woolard D, Zhao P, Rutherglen C, Yu Z, Burke P, Brueck S, Stintz A (2008) Nanoscale imaging technology for terahertz-frequency transmission microscopy. Int J High Speed Electron Syst 18(1):205–222CrossRef
48.
Akyildiz IF, Jornet JM (2010) The Internet of Nano-Things. IEEE Wirel Commun Mag 17(6):58–63CrossRef
49.
Jornet JM, Akyildiz IF (2010) Channel capacity of electromagnetic nanonetworks in the terahertz band. In: Proceedings of IEEE international conference on communications, ICC, pp. 1–6. (May 2010)
50.
Garrald N, Llatser I, Cabellos-Aparicio A, Pierobony M (2011) Low-weight channel coding for interference mitigation in electromagnetic nanonetworks in the terahertz band. In: Proceedings of IEEE INFOCOM 2011
51.
Dressler F, Kargl F (2012) Towards security in nano-communication: challenges and opportunities. Nano Commun Netw 3(3):151–160CrossRef
52.
Fall K (2009) The ns manual (formerly ns Notes and Documentation), in: The VINT Project. (January 2009)
53.
54.
55.
56.
57.
58.
Gaurav G, Shivendra T, Pardasani KR (2009) Calora: a software to simulate calcium diffusion. J Comput Inf Sci 2(2):20–30
59.
Berridge MJ, Lipp P, Bootman MD (2000) The versatility and universality of calcium signalling. Nat Rev Mol Cell Biol 1:11–21
Metadata
Title
An Architecture of Calcium Signaling for Molecular Communication Based Nano Network
Authors
Amitava Mukherjee
Sushovan Das
Soumallya Chatterjee
Copyright Year
2017
Book
Modeling, Methodologies and Tools for Molecular and Nano-scale Communications

Print ISBN: 978-3-319-50686-9

Electronic ISBN: 978-3-319-50688-3

Copyright Year: 2017

DOI
https://doi.org/10.1007/978-3-319-50688-3_8