Skip to main content
Disciplines
Automotive Business IT + Informatics Construction + Real Estate Electrical Engineering + Electronics Energy + Sustainability Insurance + Risk Finance + Banking Management + Leadership Marketing + Sales Mechanical Engineering + Materials
Events
DE
EN
Books
Journals
Topic Page
Marketing
Start single access now
Access for companies
EXTENDED SEARCH
Log in
Top
Published in:
Conditional Generative Adversarial Networks for Metal Artifact Reduction in CT Images of the Ear Read chapter Read first chapter

2018 | OriginalPaper | Chapter

Atlas Propagation Through Template Selection

Authors : Hongzhi Wang, Rui Zhang

Published in: Medical Image Computing and Computer Assisted Intervention – MICCAI 2018

Publisher: Springer International Publishing

Log in

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

Template-based atlas propagation can reduce registration cost in multi-atlas segmentation. In this method, atlases and testing images are registered to a common template. We show that using a common template may be suboptimal for reducing atlas propagation errors. Instead, we propose to apply a custom selected template for each testing image by employing a large template library and a fast template selection technique. The proposed method significantly outperforms common template based atlas propagation. Using a template library with 50 images, our method produced comparable results to standard direct registration-based multi-atlas segmentation with a small fraction of registration cost.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

inform now

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

inform now

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

inform now
previous chapter Registration-Based Patient-Specific Musculoskeletal Modeling Using High Fidelity Cadaveric Template Model
next chapter Spatio-Temporal Atlas of Bone Mineral Density Ageing
Literature
1.
Aljabar, P., Heckemann, R., Hammers, A., Hajnal, J., Rueckert, D.: Multi-atlas based segmentation of brain images: Atlas selection and its effect on accuracy. NeuroImage 46, 726–739 (2009)CrossRef
2.
Asman, A.J., Huo, Y., Plassard, A.J., Landman, B.A.: Multi-atlas learner fusion: An efficient segmentation approach for large-scale data. MedIA 26(1), 82–91 (2015)
3.
Avants, B., Epstein, C., Grossman, M., Gee, J.: Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain. MedIA 12(1), 26–41 (2008)
4.
Avants, B.B., Yushkevich, P., Pluta, J., Minkoff, D., Korczykowski, M., Detre, J., Gee, J.C.: The optimal template effect in hippocampus studies of diseased populations. Neuroimage 49(3), 2457–2466 (2010)CrossRef
5.
Coupe, P., Manjon, J., Fonov, V., Pruessner, J., Robles, N., Collins, D.: Patch-based segmentation using expert priors: Application to hippocampus and ventricle segmentation. NeuroImage 54(2), 940–954 (2011)CrossRef
6.
Jia, H., Yap, P., Shen, D.: Iterative multi-atlas-based multi-image segmentation with tree-based registration. Neuroimage 59(1), 422–430 (2012)CrossRef
7.
Joshi, S., Davis, B., Jomier, M., Gerig, G.: Unbiased diffeomorphism atlas construction for computational anatomy. NeuroImage 23, 151–160 (2004)
8.
Lotjonen, J., Wolz, R., Koikkalainen, J., Thurfjell, L., Waldemar, G., Soininen, H., Rueckert, D.: Fast and robust multi-atlas segmentation of brain magnetic resonance images. NeuroImage 49(3), 2352–2365 (2010)CrossRef
9.
Pipitone, J., Park, M., Winterburn, J., Lett, T.A., Lerch, J.P., Pruessner, J.C., Lepage, M., Voineskos, A.N., Chakravarty, M.M.: Multi-atlas segmentation of the whole hippocampus and subfields using multiple automatically generated templates. Neuroimage 101, 494–512 (2014)CrossRef
10.
Rohlfing, T., Brandt, R., Menzel, R., Maurer, C.: Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains. NeuroImage 21(4), 1428–1442 (2004)CrossRef
11.
Wang, H., Suh, J.W., Das, S., Pluta, J., Craige, C., Yushkevich, P.: Multi-atlas segmentation with joint label fusion. IEEE Trans. on PAMI 35(3), 611–623 (2013)CrossRef
12.
Wang, H., Pouch, A., Takabe, M., Jackson, B., Gorman, J., Gorman, R., Yushkevich, P.A.: Multi-atlas segmentation with robust label transfer and label fusion. In: Information Processing in Medical Imaging (2013)
13.
Wolz, R., Aljabar, P., Hajnal, J., Hammers, A., Rueckert, D.: Leap: Learning embeddings for atlas propagation. NeuroImage 49(2), 1316–1325 (2010)CrossRef
14.
Zhuang, X., Leung, K., Rhode, K., Razavi, R., Hawkes, D., Ourselin, S.: Whole heart segmentation of cardiac mri using multiple path propagation strategy. In: MICCAI. pp. 435–443. Springer (2010)
Metadata
Title
Atlas Propagation Through Template Selection
Authors
Hongzhi Wang
Rui Zhang
Copyright Year
2018
Book
Medical Image Computing and Computer Assisted Intervention – MICCAI 2018

Print ISBN: 978-3-030-00927-4

Electronic ISBN: 978-3-030-00928-1

Copyright Year: 2018

DOI
https://doi.org/10.1007/978-3-030-00928-1_80

Premium Partner

    Image Credits