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2021 | OriginalPaper | Chapter

CPNet: Cycle Prototype Network for Weakly-Supervised 3D Renal Compartments Segmentation on CT Images

Authors : Song Wang, Yuting He, Youyong Kong, Xiaomei Zhu, Shaobo Zhang, Pengfei Shao, Jean-Louis Dillenseger, Jean-Louis Coatrieux, Shuo Li, Guanyu Yang

Published in: Medical Image Computing and Computer Assisted Intervention – MICCAI 2021

Publisher: Springer International Publishing

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Abstract

Renal compartment segmentation on CT images targets on extracting the 3D structure of renal compartments from abdominal CTA images and is of great significance to the diagnosis and treatment for kidney diseases. However, due to the unclear compartment boundary, thin compartment structure and large anatomy variation of 3D kidney CT images, deep-learning based renal compartment segmentation is a challenging task. We propose a novel weakly supervised learning framework, Cycle Prototype Network, for 3D renal compartment segmentation. It has three innovations: (1) A Cycle Prototype Learning (CPL) is proposed to learn consistency for generalization. It learns from pseudo labels through the forward process and learns consistency regularization through the reverse process. The two processes make the model robust to noise and label-efficient. (2) We propose a Bayes Weakly Supervised Module (BWSM) based on cross-period prior knowledge. It learns prior knowledge from cross-period unlabeled data and perform error correction automatically, thus generates accurate pseudo labels. (3) We present a Fine Decoding Feature Extractor (FDFE) for fine-grained feature extraction. It combines global morphology information and local detail information to obtain feature maps with sharp detail, so the model will achieve fine segmentation on thin structures. Our extensive experiments demonstrated our great performance. Our model achieves Dice of \(79.1\%\) and \(78.7\%\) with only four labeled images, achieving a significant improvement by about \(20\%\) than typical prototype model PANet [16].

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Literature
4.
go back to reference He, Y., et al.: Dense biased networks with deep priori anatomy and hard region adaptation: semi-supervised learning for fine renal artery segmentation. Med. Image Anal. 63, 101722 (2020) He, Y., et al.: Dense biased networks with deep priori anatomy and hard region adaptation: semi-supervised learning for fine renal artery segmentation. Med. Image Anal. 63, 101722 (2020)
5.
go back to reference Heller, N., et al.: The state of the art in kidney and kidney tumor segmentation in contrast-enhanced CT imaging: results of the KiTS19 challenge. Med. Image Anal. 67, 101821 (2021) Heller, N., et al.: The state of the art in kidney and kidney tumor segmentation in contrast-enhanced CT imaging: results of the KiTS19 challenge. Med. Image Anal. 67, 101821 (2021)
8.
go back to reference Li, J., Lo, P., Taha, A., Wu, H., Zhao, T.: Segmentation of renal structures for image-guided surgery. In: Frangi, A.F., Schnabel, J.A., Davatzikos, C., Alberola-López, C., Fichtinger, G. (eds.) MICCAI 2018. LNCS, vol. 11073, pp. 454–462. Springer, Cham (2018). https://doi.org/10.1007/978-3-030-00937-3_52 Li, J., Lo, P., Taha, A., Wu, H., Zhao, T.: Segmentation of renal structures for image-guided surgery. In: Frangi, A.F., Schnabel, J.A., Davatzikos, C., Alberola-López, C., Fichtinger, G. (eds.) MICCAI 2018. LNCS, vol. 11073, pp. 454–462. Springer, Cham (2018). https://​doi.​org/​10.​1007/​978-3-030-00937-3_​52
10.
go back to reference Litjens, G., et al.: A survey on deep learning in medical image analysis. Med. Image Anal. 42, 60–88 (2017) Litjens, G., et al.: A survey on deep learning in medical image analysis. Med. Image Anal. 42, 60–88 (2017)
12.
go back to reference Shao, P., et al.: Laparoscopic partial nephrectomy with segmental renal artery clamping: technique and clinical outcomes. Eur. Urol. 59(5), 849–855 (2011) Shao, P., et al.: Laparoscopic partial nephrectomy with segmental renal artery clamping: technique and clinical outcomes. Eur. Urol. 59(5), 849–855 (2011)
13.
go back to reference Shao, P., et al.: Precise segmental renal artery clamping under the guidance of dual-source computed tomography angiography during laparoscopic partial nephrectomy. Eur. Urol. 62(6), 1001–1008 (2012) Shao, P., et al.: Precise segmental renal artery clamping under the guidance of dual-source computed tomography angiography during laparoscopic partial nephrectomy. Eur. Urol. 62(6), 1001–1008 (2012)
14.
go back to reference Taha, A., Lo, P., Li, J., Zhao, T.: Kid-Net: convolution networks for kidney vessels segmentation from CT-volumes. In: Frangi, A.F., Schnabel, J.A., Davatzikos, C., Alberola-López, C., Fichtinger, G. (eds.) MICCAI 2018. LNCS, vol. 11073, pp. 463–471. Springer, Cham (2018). https://doi.org/10.1007/978-3-030-00937-3_53 Taha, A., Lo, P., Li, J., Zhao, T.: Kid-Net: convolution networks for kidney vessels segmentation from CT-volumes. In: Frangi, A.F., Schnabel, J.A., Davatzikos, C., Alberola-López, C., Fichtinger, G. (eds.) MICCAI 2018. LNCS, vol. 11073, pp. 463–471. Springer, Cham (2018). https://​doi.​org/​10.​1007/​978-3-030-00937-3_​53
16.
go back to reference Wang, K., Liew, J.H., Zou, Y., Zhou, D., Feng, J.: PANet: few-shot image semantic segmentation with prototype alignment. In: Proceedings of the IEEE/CVF International Conference on Computer Vision (ICCV) (2019) Wang, K., Liew, J.H., Zou, Y., Zhou, D., Feng, J.: PANet: few-shot image semantic segmentation with prototype alignment. In: Proceedings of the IEEE/CVF International Conference on Computer Vision (ICCV) (2019)
18.
go back to reference Zhang, S., et al.: Application of a functional 3-dimensional perfusion model in laparoscopic partial nephrectomy with precise segmental renal artery clamping. Urology 125, 98–103 (2019) Zhang, S., et al.: Application of a functional 3-dimensional perfusion model in laparoscopic partial nephrectomy with precise segmental renal artery clamping. Urology 125, 98–103 (2019)
Metadata
Title
CPNet: Cycle Prototype Network for Weakly-Supervised 3D Renal Compartments Segmentation on CT Images
Authors
Song Wang
Yuting He
Youyong Kong
Xiaomei Zhu
Shaobo Zhang
Pengfei Shao
Jean-Louis Dillenseger
Jean-Louis Coatrieux
Shuo Li
Guanyu Yang
Copyright Year
2021
DOI
https://doi.org/10.1007/978-3-030-87196-3_55

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