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2018 | OriginalPaper | Chapter

Exceptional Attributed Subgraph Mining to Understand the Olfactory Percept

Authors : Maëlle Moranges, Marc Plantevit, Arnaud Fournel, Moustafa Bensafi, Céline Robardet

Published in: Discovery Science

Publisher: Springer International Publishing

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Abstract

Human olfactory perception is a complex phenomenon whose neural mechanisms are still largely unknown and novel methods are needed to better understand it. Methodological issues that prevent such understanding are: (1) to be comparable, individual cerebral images have to be transformed in order to fit a template brain, leading to a spatial imprecision that has to be taken into account in the analysis; (2) we have to deal with inter-individual variability of the hemodynamic signal from fMRI images which render comparisons of individual raw data difficult. The aim of the present paper was to overcome these issues. To this end, we developed a methodology based on discovering exceptional attributed subgraphs which enabled extracting invariants from fMRI data of a sample of individuals breathing different odorant molecules.Four attributed graph models were proposed that differ in how they report the hemodynamic activity measured in each voxel by associating varied attributes to the vertices of the graph. An extensive empirical study is presented that compares the ability of each modeling to uncover some brain areas that are of interest for the neuroscientists.

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Footnotes
1
The odorant names are: 3Hex, ACE, DEC, EUG, HEP, MAN.
 
3
I.e., \(neutral > pleasant, unpleasant\), or \(neutral < pleasant, unpleasant\), or \(pleasant> neutral > unpleasant\), or \(unpleasant> neutral > pleasant\).
 
Literature
1.
go back to reference Atzmüller, M., Puppe, F.: SD-map - a fast algorithm for exhaustive subgroup discovery. In: ECMLPKDD, pp. 6–17 (2006) Atzmüller, M., Puppe, F.: SD-map - a fast algorithm for exhaustive subgroup discovery. In: ECMLPKDD, pp. 6–17 (2006)
2.
go back to reference Baba, T., et al.: Severe olfactory dysfunction is a prodromal symptom of dementia associated with Parkinson’s disease: a 3 year longitudinal study. Brain 135(1), 161–169 (2012)CrossRef Baba, T., et al.: Severe olfactory dysfunction is a prodromal symptom of dementia associated with Parkinson’s disease: a 3 year longitudinal study. Brain 135(1), 161–169 (2012)CrossRef
3.
go back to reference Bay, S.D., Pazzani, M.J.: Detecting group differences: mining contrast sets. Data Min. Knowl. Discov. 5(3), 213–246 (2001)CrossRef Bay, S.D., Pazzani, M.J.: Detecting group differences: mining contrast sets. Data Min. Knowl. Discov. 5(3), 213–246 (2001)CrossRef
4.
go back to reference Bendimerad, A.A., Plantevit, M., Robardet, C.: Mining exceptional closed patterns in attributed graphs. Knowl. Inf. Syst. 56(1), 1–25 (2018)CrossRef Bendimerad, A.A., Plantevit, M., Robardet, C.: Mining exceptional closed patterns in attributed graphs. Knowl. Inf. Syst. 56(1), 1–25 (2018)CrossRef
6.
go back to reference Croy, I., Bojanowski, V., Hummel, T.: Men without a sense of smell exhibit a strongly reduced number of sexual relationships, women exhibit reduced partnership security-a reanalysis of previously published data. Biol. Psychol. 92(2), 292–294 (2013)CrossRef Croy, I., Bojanowski, V., Hummel, T.: Men without a sense of smell exhibit a strongly reduced number of sexual relationships, women exhibit reduced partnership security-a reanalysis of previously published data. Biol. Psychol. 92(2), 292–294 (2013)CrossRef
7.
go back to reference Dong, G., Li, J.: Efficient mining of emerging patterns: discovering trends and differences. In: KDD, pp. 43–52. ACM (1999) Dong, G., Li, J.: Efficient mining of emerging patterns: discovering trends and differences. In: KDD, pp. 43–52. ACM (1999)
8.
go back to reference Downar, L., Duivesteijn, W.: Exceptionally monotone models—the rank correlation model class for exceptional model mining. Knowl. Inf. Syst. 51(2), 369–394 (2017). MayCrossRef Downar, L., Duivesteijn, W.: Exceptionally monotone models—the rank correlation model class for exceptional model mining. Knowl. Inf. Syst. 51(2), 369–394 (2017). MayCrossRef
9.
go back to reference Duivesteijn, W., Feelders, A.J., Knobbe, A.: Exceptional model mining. Data Min. Knowl. Discov. 30(1), 47–98 (2016)MathSciNetCrossRef Duivesteijn, W., Feelders, A.J., Knobbe, A.: Exceptional model mining. Data Min. Knowl. Discov. 30(1), 47–98 (2016)MathSciNetCrossRef
10.
go back to reference Fournel, A., Ferdenzi, C., Sezille, C., Rouby, C., Bensafi, M.: Multidimensional representation of odors in the human olfactory cortex. Hum. Brain Mapp. 37, 2161–2172 (2016)CrossRef Fournel, A., Ferdenzi, C., Sezille, C., Rouby, C., Bensafi, M.: Multidimensional representation of odors in the human olfactory cortex. Hum. Brain Mapp. 37, 2161–2172 (2016)CrossRef
11.
go back to reference Friston, K., Ashburner, J., Frith, C.D., Poline, J.B., Heather, J.D., Frackowiak, R.S., et al.: Spatial registration and normalization of images. Hum. Brain Mapp. 3(3), 165–189 (1995)CrossRef Friston, K., Ashburner, J., Frith, C.D., Poline, J.B., Heather, J.D., Frackowiak, R.S., et al.: Spatial registration and normalization of images. Hum. Brain Mapp. 3(3), 165–189 (1995)CrossRef
12.
go back to reference Friston, K.J., Holmes, A.P., Worsley, K.J., Poline, J.P., Frith, C.D., Frackowiak, R.S.: Statistical parametric maps in functional imaging: a general linear approach. Hum. Brain Mapp. 2(4), 189–210 (1994)CrossRef Friston, K.J., Holmes, A.P., Worsley, K.J., Poline, J.P., Frith, C.D., Frackowiak, R.S.: Statistical parametric maps in functional imaging: a general linear approach. Hum. Brain Mapp. 2(4), 189–210 (1994)CrossRef
13.
go back to reference Gottfried, J.A., Winston, J.S., Dolan, R.J.: Dissociable codes of odor quality and odorant structure in human piriform cortex. Neuron 49(3), 467–479 (2006)CrossRef Gottfried, J.A., Winston, J.S., Dolan, R.J.: Dissociable codes of odor quality and odorant structure in human piriform cortex. Neuron 49(3), 467–479 (2006)CrossRef
14.
go back to reference Grosskreutz, H., Lang, B., Trabold, D.: A relevance criterion for sequential patterns. In: ECMLPKDD, pp. 369–384 (2013) Grosskreutz, H., Lang, B., Trabold, D.: A relevance criterion for sequential patterns. In: ECMLPKDD, pp. 369–384 (2013)
15.
go back to reference Grosskreutz, H., Rüping, S.: On subgroup discovery in numerical domains. Data Min. Knowl. Discov. 19(2), 210–226 (2009)MathSciNetCrossRef Grosskreutz, H., Rüping, S.: On subgroup discovery in numerical domains. Data Min. Knowl. Discov. 19(2), 210–226 (2009)MathSciNetCrossRef
16.
go back to reference Howard, J.D., Plailly, J., Grueschow, M., Haynes, J.D., Gottfried, J.A.: Odor quality coding and categorization in human posterior piriform cortex. Nat. Neurosci. 12(7), 932 (2009)CrossRef Howard, J.D., Plailly, J., Grueschow, M., Haynes, J.D., Gottfried, J.A.: Odor quality coding and categorization in human posterior piriform cortex. Nat. Neurosci. 12(7), 932 (2009)CrossRef
17.
go back to reference Kaytoue, M., Plantevit, M., Zimmermann, A., Bendimerad, A., Robardet, C.: Exceptional contextual subgraph mining. Mach. Learn. (2017) Kaytoue, M., Plantevit, M., Zimmermann, A., Bendimerad, A., Robardet, C.: Exceptional contextual subgraph mining. Mach. Learn. (2017)
18.
go back to reference Klösgen, W.: Explora: a multipattern and multistrategy discovery assistant. In: Advances in Knowledge Discovery and Data Mining, pp. 249–271. AAAI (1996) Klösgen, W.: Explora: a multipattern and multistrategy discovery assistant. In: Advances in Knowledge Discovery and Data Mining, pp. 249–271. AAAI (1996)
19.
go back to reference Lavrač, N., Kavšek, B., Flach, P., Todorovski, L.: Subgroup discovery with CN2-SD. J. Mach. Learn. Res. 5(Feb), 153–188 (2004) Lavrač, N., Kavšek, B., Flach, P., Todorovski, L.: Subgroup discovery with CN2-SD. J. Mach. Learn. Res. 5(Feb), 153–188 (2004)
20.
22.
go back to reference Lemmerich, F., Atzmueller, M., Puppe, F.: Fast exhaustive subgroup discovery with numerical target concepts. Data Min. Knowl. Discov. 30(3), 711–762 (2016)MathSciNetCrossRef Lemmerich, F., Atzmueller, M., Puppe, F.: Fast exhaustive subgroup discovery with numerical target concepts. Data Min. Knowl. Discov. 30(3), 711–762 (2016)MathSciNetCrossRef
23.
go back to reference Muthukumaraswamy, S.D., Edden, R.A., Jones, D.K., Swettenham, J.B., Singh, K.D.: Resting gaba concentration predicts peak gamma frequency and fMRI amplitude in response to visual stimulation in humans. Proc. Natl. Acad. Sci. 106(20), 8356–8361 (2009)CrossRef Muthukumaraswamy, S.D., Edden, R.A., Jones, D.K., Swettenham, J.B., Singh, K.D.: Resting gaba concentration predicts peak gamma frequency and fMRI amplitude in response to visual stimulation in humans. Proc. Natl. Acad. Sci. 106(20), 8356–8361 (2009)CrossRef
25.
go back to reference Schofield, P.W., Ebrahimi, H., Jones, A.L., Bateman, G.A., Murray, S.R.: An olfactory ‘stress test’may detect preclinical alzheimer’s disease. BMC Neurol. 12(1), 24 (2012)CrossRef Schofield, P.W., Ebrahimi, H., Jones, A.L., Bateman, G.A., Murray, S.R.: An olfactory ‘stress test’may detect preclinical alzheimer’s disease. BMC Neurol. 12(1), 24 (2012)CrossRef
26.
go back to reference Stevenson, R.J.: An initial evaluation of the functions of human olfaction. Chem. Senses 35(1), 3–20 (2009)CrossRef Stevenson, R.J.: An initial evaluation of the functions of human olfaction. Chem. Senses 35(1), 3–20 (2009)CrossRef
27.
go back to reference Tukey, J.W.: Exploratory Data Analysis, vol. 2. Reading, Mass (1977)MATH Tukey, J.W.: Exploratory Data Analysis, vol. 2. Reading, Mass (1977)MATH
Metadata
Title
Exceptional Attributed Subgraph Mining to Understand the Olfactory Percept
Authors
Maëlle Moranges
Marc Plantevit
Arnaud Fournel
Moustafa Bensafi
Céline Robardet
Copyright Year
2018
DOI
https://doi.org/10.1007/978-3-030-01771-2_18

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