Skip to main content
Top

2019 | OriginalPaper | Chapter

Experimental Evidences Suggest High Between-Vesicle Diversity of Artificial Vesicle Populations: Results, Models and Implications

Authors : Pasquale Stano, Roberto Marangoni, Fabio Mavelli

Published in: Computational Intelligence Methods for Bioinformatics and Biostatistics

Publisher: Springer International Publishing

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

In the past years, artificial cellular models for origins-of-life research and synthetic biology have been extensively studied. At this aim, solute-filled lipid vesicles (liposomes) are widely used. Several evidences have been collected about the capture of water-soluble chemicals, the mechanism of vesicle self-reproduction, and the course of (bio)chemical reactions in the vesicle lumen. Among the several fascinating questions which emerged from these studies, here we focus on a peculiar feature, namely, the fact that a spontaneous heterogeneity of vesicle structure often emerges. In other words, vesicle populations created in the laboratory by classical batch methods include very ‘diverse’ vesicles with respect to size, morphology, and – importantly – solute content. The consequences of this between-vesicle diversity are shortly discussed.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Footnotes
1
Ideally, one would like to have a single lipid monolayer deposited over a large surface so that all parts of the film would experience the same conditions. This corresponds, in most cases, to work well below the \(\mu \)M lipid concentration range, with consequent vesicle losses and other impractical complications. Thus, in the most common experimental conditions the film is rarely so perfect and different regions of the film will experience different micro-environments. Actually, realistic laboratory conditions might affect the measured heterogeneity of vesicle formation paths.
 
2
Note that this loss does not refer to the volume loss which follows from the vesicle size reduction, but it is an authentic concentration reduction due to the reduction of the average number per unit of volume.
 
Literature
1.
go back to reference Altamura, E., Carrara, P., D’Angelo, F., Mavelli, F., Stano, P.: Extrinsic stochastic factors (solute partition) in gene expression inside lipid vesicles and lipid-stabilized water-in-oil droplets. Synth. Biol. (OUP) p. (2018, in press) Altamura, E., Carrara, P., D’Angelo, F., Mavelli, F., Stano, P.: Extrinsic stochastic factors (solute partition) in gene expression inside lipid vesicles and lipid-stabilized water-in-oil droplets. Synth. Biol. (OUP) p. (2018, in press)
2.
go back to reference Bangham, A.D., Horne, R.W.: Negative staining of phospholipids and their structural modification by surface-active agents as observed in the electron microscope. J. Mol. Biol. 8, 660–668 (1964)CrossRef Bangham, A.D., Horne, R.W.: Negative staining of phospholipids and their structural modification by surface-active agents as observed in the electron microscope. J. Mol. Biol. 8, 660–668 (1964)CrossRef
5.
go back to reference D’Aguanno, E., Altamura, E., Mavelli, F., Fahr, A., Stano, P., Luisi, P.L.: Physical routes to primitive cells: an experimental model based on the spontaneous entrapment of enzymes inside micrometer-sized liposomes. Life (Basel, Switzerland) 5(1), 969–996 (2015). https://doi.org/10.3390/life5010969CrossRef D’Aguanno, E., Altamura, E., Mavelli, F., Fahr, A., Stano, P., Luisi, P.L.: Physical routes to primitive cells: an experimental model based on the spontaneous entrapment of enzymes inside micrometer-sized liposomes. Life (Basel, Switzerland) 5(1), 969–996 (2015). https://​doi.​org/​10.​3390/​life5010969CrossRef
9.
go back to reference Fanti, A., Gammuto, L., Mavelli, F., Stano, P., Marangoni, R.: Do protocells preferentially retain macromolecular solutes upon division/fragmentation? A study based on the extrusion of POPC giant vesicles. Integr. Biol. (Camb) 10(1), 6–17 (2018). https://doi.org/10.1039/c7ib00138jCrossRef Fanti, A., Gammuto, L., Mavelli, F., Stano, P., Marangoni, R.: Do protocells preferentially retain macromolecular solutes upon division/fragmentation? A study based on the extrusion of POPC giant vesicles. Integr. Biol. (Camb) 10(1), 6–17 (2018). https://​doi.​org/​10.​1039/​c7ib00138jCrossRef
10.
go back to reference Fox, S.V.: Self-assembly of the protocell from a self-ordered polymer. J. Sci. Ind. Res. 27, 267–274 (1968) Fox, S.V.: Self-assembly of the protocell from a self-ordered polymer. J. Sci. Ind. Res. 27, 267–274 (1968)
11.
go back to reference Gebicki, J.M., Hicks, M.: Ufasomes are stable particles surrounded by unsaturated fatty acid membranes. Nature 243(5404), 232–234 (1973)CrossRef Gebicki, J.M., Hicks, M.: Ufasomes are stable particles surrounded by unsaturated fatty acid membranes. Nature 243(5404), 232–234 (1973)CrossRef
13.
go back to reference Hanczyc, M.M.: The early history of protocells - the search for the recipe of life. In: Rasmussen, S., et al. (eds.) Protocells Bridging Nonliving and Living Matter. MIT Press, Cambridge (2009) Hanczyc, M.M.: The early history of protocells - the search for the recipe of life. In: Rasmussen, S., et al. (eds.) Protocells Bridging Nonliving and Living Matter. MIT Press, Cambridge (2009)
15.
go back to reference Hargreaves, W.R., Deamer, D.W.: Liposomes from ionic, single-chain amphiphiles. Biochemistry 17(18), 3759–3768 (1978)CrossRef Hargreaves, W.R., Deamer, D.W.: Liposomes from ionic, single-chain amphiphiles. Biochemistry 17(18), 3759–3768 (1978)CrossRef
16.
23.
go back to reference Maturana, H.R., Varela, F.J.: Autopoiesis and Cognition: The Realization of the Living. D. Reidel Publishing Company, 1st edn. (1980) Maturana, H.R., Varela, F.J.: Autopoiesis and Cognition: The Realization of the Living. D. Reidel Publishing Company, 1st edn. (1980)
25.
go back to reference Mavelli, F., Stano, P.: Experiments on and numerical modeling of the capture and concentration of transcription-translation machinery inside vesicles. Artif. Life 21(4), 445–463 (2015)CrossRef Mavelli, F., Stano, P.: Experiments on and numerical modeling of the capture and concentration of transcription-translation machinery inside vesicles. Artif. Life 21(4), 445–463 (2015)CrossRef
26.
go back to reference Nakano, T., Eckford, A.W., Haraguchi, T.: Molecular Communications. Cambridge University Press, Cambridge UK (2013)CrossRef Nakano, T., Eckford, A.W., Haraguchi, T.: Molecular Communications. Cambridge University Press, Cambridge UK (2013)CrossRef
27.
go back to reference Oparin, A.I.: The pathways of the primary development of metabolism and artificial modeling of this development in coacervate drops. In: The Origins of Prebiological Systems and of their Molecular Matrices, pp. 331–345. S. W. Fox, New York, Academic Press edn. (1965)CrossRef Oparin, A.I.: The pathways of the primary development of metabolism and artificial modeling of this development in coacervate drops. In: The Origins of Prebiological Systems and of their Molecular Matrices, pp. 331–345. S. W. Fox, New York, Academic Press edn. (1965)CrossRef
35.
go back to reference Stano, P., Carrara, P., Kuruma, Y., de Souza, T.P., Luisi, P.L.: Compartmentalized reactions as a case of soft-matter biotechnology: synthesis of proteins and nucleic acids inside lipid vesicles. J. Mater. Chem. 21(47), 18887–18902 (2011). https://doi.org/10.1039/c1jm12298cCrossRef Stano, P., Carrara, P., Kuruma, Y., de Souza, T.P., Luisi, P.L.: Compartmentalized reactions as a case of soft-matter biotechnology: synthesis of proteins and nucleic acids inside lipid vesicles. J. Mater. Chem. 21(47), 18887–18902 (2011). https://​doi.​org/​10.​1039/​c1jm12298cCrossRef
37.
go back to reference Stano, P., Luisi, P.: Theory and construction of semi-synthetic minimal cells. In: Nesbeth, D.N. (ed.) Synthetic Biology Handbook, pp. 209–258. CRC Press, London (2016)CrossRef Stano, P., Luisi, P.: Theory and construction of semi-synthetic minimal cells. In: Nesbeth, D.N. (ed.) Synthetic Biology Handbook, pp. 209–258. CRC Press, London (2016)CrossRef
43.
go back to reference Zepik, H.H., Blochliger, E., Luisi, P.L.: A chemical model of homeostasis. Angew. Chem.-Int. Edit. 40(1), 199–202 (2001)CrossRef Zepik, H.H., Blochliger, E., Luisi, P.L.: A chemical model of homeostasis. Angew. Chem.-Int. Edit. 40(1), 199–202 (2001)CrossRef
Metadata
Title
Experimental Evidences Suggest High Between-Vesicle Diversity of Artificial Vesicle Populations: Results, Models and Implications
Authors
Pasquale Stano
Roberto Marangoni
Fabio Mavelli
Copyright Year
2019
DOI
https://doi.org/10.1007/978-3-030-14160-8_17

Premium Partner