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Published in: Journal of Computational Neuroscience 3/2015

01-06-2015

Interspike interval correlation in a stochastic exponential integrate-and-fire model with subthreshold and spike-triggered adaptation

Authors: LieJune Shiau, Tilo Schwalger, Benjamin Lindner

Published in: Journal of Computational Neuroscience | Issue 3/2015

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Abstract

We study the spike statistics of an adaptive exponential integrate-and-fire neuron stimulated by white Gaussian current noise. We derive analytical approximations for the coefficient of variation and the serial correlation coefficient of the interspike interval assuming that the neuron operates in the mean-driven tonic firing regime and that the stochastic input is weak. Our result for the serial correlation coefficient has the form of a geometric sequence and is confirmed by the comparison to numerical simulations. The theory predicts various patterns of interval correlations (positive or negative at lag one, monotonically decreasing or oscillating) depending on the strength of the spike-triggered and subthreshold components of the adaptation current. In particular, for pure subthreshold adaptation we find strong positive ISI correlations that are usually ascribed to positive correlations in the input current. Our results i) provide an alternative explanation for interspike-interval correlations observed in vivo, ii) may be useful in fitting point neuron models to experimental data, and iii) may be instrumental in exploring the role of adaptation currents for signal detection and signal transmission in single neurons.

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Appendix
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Footnotes
1
In this case, the unstable subthreshold limit cycle still exists, while the unstable spike-associated limit cycle involving the voltage reset has become unstable itself. Perturbations around the spike limit cycle will grow in an oscillatory manner, can then overcome the inner unstable limit cycle due to the reset rule and go eventually to the stable focus.
 
2
Choosing a very small noise intensity for all parameters entails other difficulties: if the jitter of the interspike interval (order of C VT ) becomes very small (of the order of the discrete time step Δt), numerical errors in the simulation results due to the discrete nature of our integration scheme can be expected. These errors can be reduced by decreasing the time step, which may become computationally expensive.
 
Literature
go back to reference Avila-Akerberg, O., & Chacron, M.J. (2011). Nonrenewal spike train statistics: causes and consequences on neural coding. Experimental Brain Research, 210, 353.CrossRefPubMed Avila-Akerberg, O., & Chacron, M.J. (2011). Nonrenewal spike train statistics: causes and consequences on neural coding. Experimental Brain Research, 210, 353.CrossRefPubMed
go back to reference Bear, M.F., Connors, B.W., & Paradiso, M.A. (2007). Neuroscience: Exploring the brain. Baltimore: Lippincott Williams and Wilkins. Bear, M.F., Connors, B.W., & Paradiso, M.A. (2007). Neuroscience: Exploring the brain. Baltimore: Lippincott Williams and Wilkins.
go back to reference Benda, J., & Herz, A.V.M. (2003). A universal model for spike-frequency adaptation. Neural Computation, 15, 2523.CrossRefPubMed Benda, J., & Herz, A.V.M. (2003). A universal model for spike-frequency adaptation. Neural Computation, 15, 2523.CrossRefPubMed
go back to reference Benda, J., Longtin, A., & Maler, L. (2005). Spike-frequency adaptation separates transient communication signals from background oscillations. Journal of Neuroscience, 25(9), 2312.CrossRefPubMed Benda, J., Longtin, A., & Maler, L. (2005). Spike-frequency adaptation separates transient communication signals from background oscillations. Journal of Neuroscience, 25(9), 2312.CrossRefPubMed
go back to reference Benda, J., Maler, L., & Longtin, A. (2010). Linear versus nonlinear signal transmission in neuron models with adaptation currents or dynamic thresholds. Journal of Neurophysiology, 104(5), 2806.CrossRefPubMed Benda, J., Maler, L., & Longtin, A. (2010). Linear versus nonlinear signal transmission in neuron models with adaptation currents or dynamic thresholds. Journal of Neurophysiology, 104(5), 2806.CrossRefPubMed
go back to reference Brette, R., & Gerstner, W. (2005). Adaptive Exponential Integrate-and-Fire model as an effective description of neuronal activity. Journal of Neurophysiology, 94(5), 3637.CrossRefPubMed Brette, R., & Gerstner, W. (2005). Adaptive Exponential Integrate-and-Fire model as an effective description of neuronal activity. Journal of Neurophysiology, 94(5), 3637.CrossRefPubMed
go back to reference Chacron, M.J., Lindner, B., & Longtin, A. (2004). Noise shaping by interval correlations increases information transfer. Physical Review Letters, 92(8), 080601.CrossRefPubMed Chacron, M.J., Lindner, B., & Longtin, A. (2004). Noise shaping by interval correlations increases information transfer. Physical Review Letters, 92(8), 080601.CrossRefPubMed
go back to reference Chacron, M.J., Longtin, A., & Maler, L. (2001). Negative interspike interval correlations increase the neuronal capacity for encoding time-dependent stimuli. Journal of Neuroscience, 21(14), 5328.PubMed Chacron, M.J., Longtin, A., & Maler, L. (2001). Negative interspike interval correlations increase the neuronal capacity for encoding time-dependent stimuli. Journal of Neuroscience, 21(14), 5328.PubMed
go back to reference Chacron, M.J., Longtin, A., St-Hilaire, M., & Maler, L. (2000). Suprathreshold stochastic firing dynamics with memory in p-type electroreceptors. Physical Review Letters, 85(7), 1576.CrossRefPubMed Chacron, M.J., Longtin, A., St-Hilaire, M., & Maler, L. (2000). Suprathreshold stochastic firing dynamics with memory in p-type electroreceptors. Physical Review Letters, 85(7), 1576.CrossRefPubMed
go back to reference Clopath, C., Jolivet, R., Rauch, A., Luscher, H., & Gerstner, W. (2007). Predicting neuronal activity with simple models of the threshold type: Adaptive Exponential Integrate-and-Fire model with two compartments. Neurocomputing, 70(10-12), 1668.CrossRef Clopath, C., Jolivet, R., Rauch, A., Luscher, H., & Gerstner, W. (2007). Predicting neuronal activity with simple models of the threshold type: Adaptive Exponential Integrate-and-Fire model with two compartments. Neurocomputing, 70(10-12), 1668.CrossRef
go back to reference Cox, D.R., & Lewis, P.A.W. (1966). The Statistical Analysis of Series of Events. London: Chapman and Hall.CrossRef Cox, D.R., & Lewis, P.A.W. (1966). The Statistical Analysis of Series of Events. London: Chapman and Hall.CrossRef
go back to reference Dayan, P., & Abbott, L.F. (2001). Theoretical Neuroscience. Cambridge: MIT Press. Dayan, P., & Abbott, L.F. (2001). Theoretical Neuroscience. Cambridge: MIT Press.
go back to reference Destexhe, A., Rudolph, M., & Paré, D. (2003). The high-conductance state of neocortical neurons in vivo. Nature Reviews Neuroscience, 4, 739.CrossRefPubMed Destexhe, A., Rudolph, M., & Paré, D. (2003). The high-conductance state of neocortical neurons in vivo. Nature Reviews Neuroscience, 4, 739.CrossRefPubMed
go back to reference Engel, T.A., Schimansky-Geier, L., Herz, A.V.M., Schreiber, S., & Erchova, I. (2008). Subthreshold membrane-potential resonances shape spike-train patterns in the entorhinal cortex. Journal of Neurophysiology, 100 (3), 1576.CrossRefPubMedCentralPubMed Engel, T.A., Schimansky-Geier, L., Herz, A.V.M., Schreiber, S., & Erchova, I. (2008). Subthreshold membrane-potential resonances shape spike-train patterns in the entorhinal cortex. Journal of Neurophysiology, 100 (3), 1576.CrossRefPubMedCentralPubMed
go back to reference Ermentrout, G.B., & Terman, D.H. (2010). Mathematical Foundations of Neuroscience. New York: Springer.CrossRef Ermentrout, G.B., & Terman, D.H. (2010). Mathematical Foundations of Neuroscience. New York: Springer.CrossRef
go back to reference Fisch, K., Schwalger, T., Lindner, B., Herz, A., & Benda, J. (2012). Channel noise from both slow adaptation currents and fast currents is required to explain spike-response variability in a sensory neuron. Journal of Neuroscience, 32, 17332.CrossRefPubMed Fisch, K., Schwalger, T., Lindner, B., Herz, A., & Benda, J. (2012). Channel noise from both slow adaptation currents and fast currents is required to explain spike-response variability in a sensory neuron. Journal of Neuroscience, 32, 17332.CrossRefPubMed
go back to reference Fourcaud-Trocmé, N., Hansel, D., van Vreeswijk, C., & Brunel, N. (2003). How spike generation mechanisms determine the neuronal response to fluctuating inputs. Journal of Neuroscience, 23, 11628.PubMed Fourcaud-Trocmé, N., Hansel, D., van Vreeswijk, C., & Brunel, N. (2003). How spike generation mechanisms determine the neuronal response to fluctuating inputs. Journal of Neuroscience, 23, 11628.PubMed
go back to reference Izhikevich, E. (2003). Simple model of spiking neurons. IEEE Transactions Neural Networks, 6(14), 1569.CrossRef Izhikevich, E. (2003). Simple model of spiking neurons. IEEE Transactions Neural Networks, 6(14), 1569.CrossRef
go back to reference Gabbiani, F., & Krapp, H.G. (2006). Spike-frequency adaptation and intrinsic properties of an identified, looming-sensitive neuron. Journal of Neurophysiology, 96(6), 2951.CrossRefPubMedCentralPubMed Gabbiani, F., & Krapp, H.G. (2006). Spike-frequency adaptation and intrinsic properties of an identified, looming-sensitive neuron. Journal of Neurophysiology, 96(6), 2951.CrossRefPubMedCentralPubMed
go back to reference Jolivet, R., Kobayashi, R., Rauch, A., Naud, R., Shinomoto, S., & Gerstner, W. (2008). A benchmark test for a quantitative assessment of simple neuron models. Journal of Neuroscience Methods, 169, 417.CrossRefPubMed Jolivet, R., Kobayashi, R., Rauch, A., Naud, R., Shinomoto, S., & Gerstner, W. (2008). A benchmark test for a quantitative assessment of simple neuron models. Journal of Neuroscience Methods, 169, 417.CrossRefPubMed
go back to reference Ladenbauer, J., Augustin, M., Shiau, L., & Obermayer, K. (2012). Impact of adaptation currents on synchronization of coupled exponential integrate-and-fire neurons. PLoS Computational Biology, 8(4). Ladenbauer, J., Augustin, M., Shiau, L., & Obermayer, K. (2012). Impact of adaptation currents on synchronization of coupled exponential integrate-and-fire neurons. PLoS Computational Biology, 8(4).
go back to reference Lindner, B. (2004). Interspike interval statistics of neurons driven by colored noise. Physical Review E, 69(21). Lindner, B. (2004). Interspike interval statistics of neurons driven by colored noise. Physical Review E, 69(21).
go back to reference Liu, Y.H., & Wang, X.J. (2001). Spike-frequency adaptation of a generalized leaky integrate-and-fire model neuron. Journal of Computational Neuroscience, 10(1), 25.CrossRefPubMed Liu, Y.H., & Wang, X.J. (2001). Spike-frequency adaptation of a generalized leaky integrate-and-fire model neuron. Journal of Computational Neuroscience, 10(1), 25.CrossRefPubMed
go back to reference Lowen, S.B., & Teich, M.C. (1992). Auditory-nerve action potentials form a nonrenewal point process over short as well as long time scales. Journal of the Acoustical Society of America, 92, 803.CrossRefPubMed Lowen, S.B., & Teich, M.C. (1992). Auditory-nerve action potentials form a nonrenewal point process over short as well as long time scales. Journal of the Acoustical Society of America, 92, 803.CrossRefPubMed
go back to reference Middleton, J.W., Chacron, M.J., Lindner, B., & Longtin, A. (2003). Firing statistics of a neuron model driven by long-range correlated noise. Physical Review E, 68(21), 021920.CrossRef Middleton, J.W., Chacron, M.J., Lindner, B., & Longtin, A. (2003). Firing statistics of a neuron model driven by long-range correlated noise. Physical Review E, 68(21), 021920.CrossRef
go back to reference Naud, R., Marcille, N., Clopath, C., & Gerstner, W. (2008). Firing patterns in the adaptive exponential integrate-and-fire model. Biological Cybernetics, 99, 335.CrossRefPubMedCentralPubMed Naud, R., Marcille, N., Clopath, C., & Gerstner, W. (2008). Firing patterns in the adaptive exponential integrate-and-fire model. Biological Cybernetics, 99, 335.CrossRefPubMedCentralPubMed
go back to reference Nawrot, M.P., Boucsein, C., Rodriguez-Molina, V., Aertsen, A., Grün, S., & Rotter, S. (2007). Serial interval statistics of spontaneous activity in cortical neurons in vivo and in vitro. Neurocomputing, 70(10-12), 1717. Nawrot, M.P., Boucsein, C., Rodriguez-Molina, V., Aertsen, A., Grün, S., & Rotter, S. (2007). Serial interval statistics of spontaneous activity in cortical neurons in vivo and in vitro. Neurocomputing, 70(10-12), 1717.
go back to reference Neiman, A., & Russell, D.F. (2001). Stochastic biperiodic oscillations in the electroreceptors of paddlefish. Physical Review Letters, 86(15), 3443.CrossRefPubMed Neiman, A., & Russell, D.F. (2001). Stochastic biperiodic oscillations in the electroreceptors of paddlefish. Physical Review Letters, 86(15), 3443.CrossRefPubMed
go back to reference Nikitin, A., Stocks, N., & Bulsara, A. (2012). Enhancing the resolution of a sensor via negative correlation: a biologically inspired approach. Physical Review Letters, 109, 238103.CrossRefPubMed Nikitin, A., Stocks, N., & Bulsara, A. (2012). Enhancing the resolution of a sensor via negative correlation: a biologically inspired approach. Physical Review Letters, 109, 238103.CrossRefPubMed
go back to reference Prescott, S.A., & Sejnowski, T.J. (2008). Spike-rate coding and spike-time coding are affected oppositely by different adaptation mechanisms. Journal of Neuroscience, 28, 13649.CrossRefPubMedCentralPubMed Prescott, S.A., & Sejnowski, T.J. (2008). Spike-rate coding and spike-time coding are affected oppositely by different adaptation mechanisms. Journal of Neuroscience, 28, 13649.CrossRefPubMedCentralPubMed
go back to reference Ratnam, R., & Nelson, M.E. (2000). Nonrenewal statistics of electrosensory afferent spike trains: Implications for the detection of weak sensory signals. Journal of Neuroscience, 20, 6672.PubMed Ratnam, R., & Nelson, M.E. (2000). Nonrenewal statistics of electrosensory afferent spike trains: Implications for the detection of weak sensory signals. Journal of Neuroscience, 20, 6672.PubMed
go back to reference Rieke, F., Warland, D., de Ruyter van Steveninck, R., & Bialek, W. (1996). Spikes: Exploring the Neural Code. Cambridge, Massachusetts: MIT Press. Rieke, F., Warland, D., de Ruyter van Steveninck, R., & Bialek, W. (1996). Spikes: Exploring the Neural Code. Cambridge, Massachusetts: MIT Press.
go back to reference Schwalger, T., Fisch, K., Benda, J., & Lindner, B. (2010). How noisy adaptation of neurons shapes interspike interval histograms and correlations. PLoS Computational Biology, 6, e1001026. Schwalger, T., Fisch, K., Benda, J., & Lindner, B. (2010). How noisy adaptation of neurons shapes interspike interval histograms and correlations. PLoS Computational Biology, 6, e1001026.
go back to reference Schwalger, T., & Lindner, B. (2013). Patterns of interval correlations in neural oscillators with adaptation. Frontiers Computational Neuroscience, 7, 164. Schwalger, T., & Lindner, B. (2013). Patterns of interval correlations in neural oscillators with adaptation. Frontiers Computational Neuroscience, 7, 164.
go back to reference Touboul, J., & Brette, R. (2008). Dynamics and bifurcations of the adaptive exponential Integrate-and-Fire model. Biological Cybernetics, 99(4-5), 319.CrossRefPubMed Touboul, J., & Brette, R. (2008). Dynamics and bifurcations of the adaptive exponential Integrate-and-Fire model. Biological Cybernetics, 99(4-5), 319.CrossRefPubMed
go back to reference Treves, A. (1993). Mean-field analysis of neuronal spike dynamics. Network, 4(3), 259.CrossRef Treves, A. (1993). Mean-field analysis of neuronal spike dynamics. Network, 4(3), 259.CrossRef
go back to reference Vilela, R.D., & Lindner, B. (2009). A comparative study of three different integrate-and-fire neurons: spontaneous activity, dynamical response, and stimulus-induced correlation. Physical Review E, 031909, 80. Vilela, R.D., & Lindner, B. (2009). A comparative study of three different integrate-and-fire neurons: spontaneous activity, dynamical response, and stimulus-induced correlation. Physical Review E, 031909, 80.
go back to reference White, J.A., Rubinstein, J.T., & Kay, A.R. (2000). Channel noise in neurons. Trends in Neurosciences, 23(3), 131.CrossRefPubMed White, J.A., Rubinstein, J.T., & Kay, A.R. (2000). Channel noise in neurons. Trends in Neurosciences, 23(3), 131.CrossRefPubMed
Metadata
Title
Interspike interval correlation in a stochastic exponential integrate-and-fire model with subthreshold and spike-triggered adaptation
Authors
LieJune Shiau
Tilo Schwalger
Benjamin Lindner
Publication date
01-06-2015
Publisher
Springer US
Published in
Journal of Computational Neuroscience / Issue 3/2015
Print ISSN: 0929-5313
Electronic ISSN: 1573-6873
DOI
https://doi.org/10.1007/s10827-015-0558-4

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