Skip to main content
Top
Published in:

01-09-2022

Modeling the Impact of Delay on the Aggregation of AD Proteins

Authors: Alessandro Nutini, Ayesha Sohail, Robia Arif, Mudassar Fiaz, O. A. Beg

Published in: Annals of Data Science | Issue 1/2024

Log in

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

Accumulation of the amyloid-\(\beta \) (A\(\beta \) ) peptide in the brain gives rise to a cascade of key events in the pathogenesis of Alzheimer’s disease (AD). It is verified by different research trials that the sleep-wake cycle directly affects A\(\beta \) levels in the brain. The catalytic nature of amyloidosis and the protein aggregation can be understood with the help of enzyme kinetics. During this research, the chemical kinetics of the enzyme and substrate are used to explore the initiation of Alzheimer’s disease, and the associated physiological factors, such as the sleep wake cycles, related to this symptomatology. The model is based on the concentration of the A\(\beta \) fibrils, such that the resulting solution from the mathematical model may help to monitor the concentration gradients (deposition) during sleep deprivation. The model proposed here analyzes the existence of two phases in the production of amyloid fibrils in the sleep deprivation condition: a first phase in which the soluble form of amyloid A\(\beta \) is dominant and a second phase in which the fibrillar form predominates and suggests that such product is the result of a strong imbalance between the production of amyloid A\(\beta \) and its clearance. The time dependent model with delay, helps to explore the production of soluble A\(\beta \) amyloid form by a defective circadian cycle. The limitations of the time dependent model are facilitated by the artificial intelligence (AI) time series forecasting tools.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literature
2.
go back to reference Ju YES, Lucey BP, Holtzman DM (2014) Sleep and Alzheimer disease pathology-a bidirectional relationship. Nature Reviews Neurology. 10(2):115–119CrossRefPubMed Ju YES, Lucey BP, Holtzman DM (2014) Sleep and Alzheimer disease pathology-a bidirectional relationship. Nature Reviews Neurology. 10(2):115–119CrossRefPubMed
3.
go back to reference Huang Y, Potter R, Sigurdson W, Santacruz A, Shih S, Ju YE et al (2012) Effects of age and amyloid deposition on A\(\beta \) dynamics in the human central nervous system. Archives of neurology 69:51CrossRefPubMed Huang Y, Potter R, Sigurdson W, Santacruz A, Shih S, Ju YE et al (2012) Effects of age and amyloid deposition on A\(\beta \) dynamics in the human central nervous system. Archives of neurology 69:51CrossRefPubMed
4.
go back to reference Sperling RA, Aisen PS, Beckett LA, Bennett DA, Craft S, Fagan AM et al (2011) Toward defining the preclinical stages of Alzheimer’s disease: Recommendations from the National Institute on Aging-Alzheimer’s Association workgroups on diagnostic guidelines for Alzheimer’s disease. Alzheimer’s & dementia 7(3):280CrossRef Sperling RA, Aisen PS, Beckett LA, Bennett DA, Craft S, Fagan AM et al (2011) Toward defining the preclinical stages of Alzheimer’s disease: Recommendations from the National Institute on Aging-Alzheimer’s Association workgroups on diagnostic guidelines for Alzheimer’s disease. Alzheimer’s & dementia 7(3):280CrossRef
5.
go back to reference Sohail A, Ahmad Z, Bég OA, Arshad S, Sherin L (2017) A review on hyperthermia via nanoparticle-mediated therapy. Bull Cancer 104(5):452CrossRefPubMed Sohail A, Ahmad Z, Bég OA, Arshad S, Sherin L (2017) A review on hyperthermia via nanoparticle-mediated therapy. Bull Cancer 104(5):452CrossRefPubMed
6.
go back to reference Sohail A, Li ZW, Iftikhar M, Mohamed M, Beg OA (2017) Stochastic analysis of a deterministic and seasonally-forced SEI model for improved disease spread simulation. J Mech Med Biol 17:1750067CrossRef Sohail A, Li ZW, Iftikhar M, Mohamed M, Beg OA (2017) Stochastic analysis of a deterministic and seasonally-forced SEI model for improved disease spread simulation. J Mech Med Biol 17:1750067CrossRef
7.
go back to reference Sohail A (2019) Inference of biomedical data sets using Bayesian machine learning. Biomed Eng: Appl Basis Commun 31:1950030 Sohail A (2019) Inference of biomedical data sets using Bayesian machine learning. Biomed Eng: Appl Basis Commun 31:1950030
8.
go back to reference Sohail A, Idrees M, Sajjad M, Iftikhar S, Tunc S (2020) Computational framework to explore impact of environmental stress on epidemics. Biomed Eng (Singapore) 32:2050047 Sohail A, Idrees M, Sajjad M, Iftikhar S, Tunc S (2020) Computational framework to explore impact of environmental stress on epidemics. Biomed Eng (Singapore) 32:2050047
9.
10.
go back to reference Sohail A, Arif F (2020) Supervised and unsupervised algorithms for bioinformatics and data science. Prog Biophys Mol Biol 151:14CrossRefPubMed Sohail A, Arif F (2020) Supervised and unsupervised algorithms for bioinformatics and data science. Prog Biophys Mol Biol 151:14CrossRefPubMed
11.
go back to reference Iftikhar M, Sohail A, Ahmad N (2019) DETERMINISTIC AND STOCHASTIC ANALYSIS OF DENGUE SPREAD MODEL. Biomed Eng (Singapore) 31:1950008 Iftikhar M, Sohail A, Ahmad N (2019) DETERMINISTIC AND STOCHASTIC ANALYSIS OF DENGUE SPREAD MODEL. Biomed Eng (Singapore) 31:1950008
12.
go back to reference Yu Z, Sohail A, Nutini A, Arif R (2020) Delayed Modeling Approach to Forecast the Periodic Behaviour of SARS-2. Frontiers in Molecular Biosciences 7:386 Yu Z, Sohail A, Nutini A, Arif R (2020) Delayed Modeling Approach to Forecast the Periodic Behaviour of SARS-2. Frontiers in Molecular Biosciences 7:386
13.
go back to reference Hoore M, Khailaie S, Montaseri G, Mitra T, Meyer-Hermann M. Mathematical Model Shows How Sleep May Affect Amyloid-\(\beta \) Fibrillization; Hoore M, Khailaie S, Montaseri G, Mitra T, Meyer-Hermann M. Mathematical Model Shows How Sleep May Affect Amyloid-\(\beta \) Fibrillization;
14.
go back to reference Gramaje A, Thabtah F, Abdelhamid N, Ray SK (2019) Patient discharge classification using machine learning techniques. Ann Data Sci 1:1 Gramaje A, Thabtah F, Abdelhamid N, Ray SK (2019) Patient discharge classification using machine learning techniques. Ann Data Sci 1:1
15.
go back to reference Olson DL, Shi Y, Shi Y. Introduction to business data mining. vol. 10. McGraw-Hill/Irwin New York; 2007 Olson DL, Shi Y, Shi Y. Introduction to business data mining. vol. 10. McGraw-Hill/Irwin New York; 2007
16.
go back to reference Shi Y, Tian Y, Kou G, Peng Y, Li J (2011) Optimization based data mining: theory and applications. Springer Science & Business Media Shi Y, Tian Y, Kou G, Peng Y, Li J (2011) Optimization based data mining: theory and applications. Springer Science & Business Media
17.
go back to reference Tien JM (2017) Internet of things, real-time decision making, and artificial intelligence. Ann Data Sci 4:149CrossRef Tien JM (2017) Internet of things, real-time decision making, and artificial intelligence. Ann Data Sci 4:149CrossRef
18.
go back to reference Shi Y (2021) Advances in Big Data Analytics: Theory. Algorithms and Practices, Springer Nature Shi Y (2021) Advances in Big Data Analytics: Theory. Algorithms and Practices, Springer Nature
19.
go back to reference Olson DL, Shi Y, Shi Y (2007) Introduction to business data mining. vol. 10. McGraw-Hill/Irwin New York; Olson DL, Shi Y, Shi Y (2007) Introduction to business data mining. vol. 10. McGraw-Hill/Irwin New York;
20.
go back to reference Sherin L, Sohail A, Shujaat S (2019) Time-dependent AI-modeling of the anticancer efficacy of synthesized gallic acid analogues. Comput Biol Chem 79:137CrossRefPubMed Sherin L, Sohail A, Shujaat S (2019) Time-dependent AI-modeling of the anticancer efficacy of synthesized gallic acid analogues. Comput Biol Chem 79:137CrossRefPubMed
21.
go back to reference Nutini A, Sohail A, Farwa S (2021) BIOMEDICAL ENGINEERING OF SCLEROSTIN ACTION IN THE BONE REMODELING. Biomed Eng (Singapore) 31:2150016 Nutini A, Sohail A, Farwa S (2021) BIOMEDICAL ENGINEERING OF SCLEROSTIN ACTION IN THE BONE REMODELING. Biomed Eng (Singapore) 31:2150016
22.
go back to reference Iftikhar M, Iftikhar S, Sohail A, Javed S (2020) AI-modelling of molecular identification and feminization of wolbachia infected Aedes aegypti. Prog Biophys Mol Biol 150:104CrossRefPubMed Iftikhar M, Iftikhar S, Sohail A, Javed S (2020) AI-modelling of molecular identification and feminization of wolbachia infected Aedes aegypti. Prog Biophys Mol Biol 150:104CrossRefPubMed
23.
go back to reference Sohail A, Iftikhar M, Arif R, Ahmad H, Gepreel KA, Iftikhar S (2021) Dengue control measures via cytoplasmic incompatibility and modern programming tools. Results Phys 21:103819CrossRef Sohail A, Iftikhar M, Arif R, Ahmad H, Gepreel KA, Iftikhar S (2021) Dengue control measures via cytoplasmic incompatibility and modern programming tools. Results Phys 21:103819CrossRef
24.
go back to reference Cohen SI, Linse S, Luheshi LM, Hellstrand E, White DA, Rajah L et al (2013) Proliferation of amyloid-\(\beta \)42 aggregates occurs through a secondary nucleation mechanism. National Acad Sciences 24:9758ADSCrossRef Cohen SI, Linse S, Luheshi LM, Hellstrand E, White DA, Rajah L et al (2013) Proliferation of amyloid-\(\beta \)42 aggregates occurs through a secondary nucleation mechanism. National Acad Sciences 24:9758ADSCrossRef
Metadata
Title
Modeling the Impact of Delay on the Aggregation of AD Proteins
Authors
Alessandro Nutini
Ayesha Sohail
Robia Arif
Mudassar Fiaz
O. A. Beg
Publication date
01-09-2022
Publisher
Springer Berlin Heidelberg
Published in
Annals of Data Science / Issue 1/2024
Print ISSN: 2198-5804
Electronic ISSN: 2198-5812
DOI
https://doi.org/10.1007/s40745-022-00439-z

Premium Partner