Skip to main content
Top

2018 | OriginalPaper | Chapter

Multi-view Brain Network Prediction from a Source View Using Sample Selection via CCA-Based Multi-kernel Connectomic Manifold Learning

Authors : Minghui Zhu, Islem Rekik

Published in: PRedictive Intelligence in MEdicine

Publisher: Springer International Publishing

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

Several challenges emerged from the dataclysm of neuroimaging datasets spanning both healthy and disordered brain spectrum. In particular, samples with missing data views (e.g., functional imaging modality) constitute a hurdle to conventional big data learning techniques which ideally would be trained using a maximum number of samples across all views. Existing works on predicting target data views from a source data view mainly used brain images such as predicting PET image from MRI image. However, to the best of our knowledge, predicting a set of target brain networks from a source network remains unexplored. To fill this gap, a multi-kernel manifold learning (MKML) framework is proposed to learn how to predict multi-view brain networks from a source network to impute missing views in a connectomic dataset. Prior to performing multiple kernel learning of multi-view data, it is typically assumed that the source and target data come from the same distribution. However, multi-view connectomic data can be drawn from different distributions. In order to build robust predictors for predicting target multi-view networks from a source network view, it is necessary to take into account the shift between the source and target domains. Hence, we first estimate a mapping function that transforms the source and the target domains into a shared space where their correlation is maximized using canonical correlation analysis (CCA). Next, we nest the projected training and testing source samples into a connectomic manifold using multiple kernel learning, where we identify the most similar training samples to the testing source network. Given a testing subject, we introduce a cross-domain trust score to assess the reliability of each selected training sample for the target prediction task. Our model outperformed both conventional MKML technique and the proposed CCA-based MKML technique without enhancement by trust scores.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Footnotes
1
http://fcon_1000.projects.nitrc.org/indi/abide/.
 
Literature
2.
go back to reference Mahjoub, I., Mahjoub, M.A., Rekik, I.: Brain multiplexes reveal morphological connectional biomarkers fingerprinting late brain dementia states. Sci. Rep. 8, 4103 (2018)CrossRef Mahjoub, I., Mahjoub, M.A., Rekik, I.: Brain multiplexes reveal morphological connectional biomarkers fingerprinting late brain dementia states. Sci. Rep. 8, 4103 (2018)CrossRef
3.
go back to reference Lisowska, A., Rekik, I.: Joint pairing and structured mapping of convolutional brain morphological multiplexes for early dementia diagnosis. Brain Connect. (2018) Lisowska, A., Rekik, I.: Joint pairing and structured mapping of convolutional brain morphological multiplexes for early dementia diagnosis. Brain Connect. (2018)
4.
go back to reference Tran, L., Liu, X., Zhou, J., Jin, R.: Missing modalities imputation via cascaded residual autoencoder. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 1405–1414 (2017) Tran, L., Liu, X., Zhou, J., Jin, R.: Missing modalities imputation via cascaded residual autoencoder. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 1405–1414 (2017)
5.
go back to reference Vaden Jr., K.I., Gebregziabher, M., Kuchinsky, S.E., Eckert, M.A.: Multiple imputation of missing fMRI data in whole brain analysis. Neuroimage 60, 1843–1855 (2012)CrossRef Vaden Jr., K.I., Gebregziabher, M., Kuchinsky, S.E., Eckert, M.A.: Multiple imputation of missing fMRI data in whole brain analysis. Neuroimage 60, 1843–1855 (2012)CrossRef
6.
go back to reference Blitzer, J., Kakade, S., Foster, D.: Domain adaptation with coupled subspaces. In: Proceedings of the Fourteenth International Conference on Artificial Intelligence and Statistics, pp. 173–181 (2011) Blitzer, J., Kakade, S., Foster, D.: Domain adaptation with coupled subspaces. In: Proceedings of the Fourteenth International Conference on Artificial Intelligence and Statistics, pp. 173–181 (2011)
7.
go back to reference Zhu, X., Suk, H.I., Lee, S.W., Shen, D.: Canonical feature selection for joint regression and multi-class identification in Alzheimer’s disease diagnosis. Brain Imaging Behav. 10, 818–828 (2016)CrossRef Zhu, X., Suk, H.I., Lee, S.W., Shen, D.: Canonical feature selection for joint regression and multi-class identification in Alzheimer’s disease diagnosis. Brain Imaging Behav. 10, 818–828 (2016)CrossRef
8.
go back to reference Haghighat, M., Abdel-Mottaleb, M., Alhalabi, W.: Fully automatic face normalization and single sample face recognition in unconstrained environments. Expert Syst. Appl. 47, 23–34 (2016)CrossRef Haghighat, M., Abdel-Mottaleb, M., Alhalabi, W.: Fully automatic face normalization and single sample face recognition in unconstrained environments. Expert Syst. Appl. 47, 23–34 (2016)CrossRef
9.
go back to reference Wang, B., Zhu, J., Pierson, E., Ramazzotti, D., Batzoglou, S.: Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning. Nat. Methods 14, 414 (2017)CrossRef Wang, B., Zhu, J., Pierson, E., Ramazzotti, D., Batzoglou, S.: Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning. Nat. Methods 14, 414 (2017)CrossRef
11.
go back to reference Luo, Y., Tao, D., Ramamohanarao, K., Xu, C., Wen, Y.: Tensor canonical correlation analysis for multi-view dimension reduction. IEEE Trans. Knowl. Data Eng. 27, 3111–3124 (2015)CrossRef Luo, Y., Tao, D., Ramamohanarao, K., Xu, C., Wen, Y.: Tensor canonical correlation analysis for multi-view dimension reduction. IEEE Trans. Knowl. Data Eng. 27, 3111–3124 (2015)CrossRef
Metadata
Title
Multi-view Brain Network Prediction from a Source View Using Sample Selection via CCA-Based Multi-kernel Connectomic Manifold Learning
Authors
Minghui Zhu
Islem Rekik
Copyright Year
2018
DOI
https://doi.org/10.1007/978-3-030-00320-3_12

Premium Partner