Skip to main content
Top

2016 | OriginalPaper | Chapter

Super-Resolution Reconstruction of Diffusion-Weighted Images Using 4D Low-Rank and Total Variation

Authors : Feng Shi, Jian Cheng, Li Wang, Pew-Thian Yap, Dinggang Shen

Published in: Computational Diffusion MRI

Publisher: Springer International Publishing

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

Diffusion-weighted imaging (DWI) provides invaluable information in white matter microstructure and is widely applied in neurological applications. However, DWI is largely limited by its relatively low spatial resolution. In this paper, we propose an image post-processing method, referred to as super-resolution reconstruction, to estimate a high spatial resolution DWI from the input low-resolution DWI, e.g., at a factor of 2. Instead of requiring specially designed DWI acquisition of multiple shifted or orthogonal scans, our method needs only a single DWI scan. To do that, we propose to model both the blurring and downsampling effects in the image degradation process where the low-resolution image is observed from the latent high-resolution image, and recover the latent high-resolution image with the help of two regularizations. The first regularization is four-dimensional (4D) low-rank, proposed to gather self-similarity information from both the spatial domain and the diffusion domain of 4D DWI. The second regularization is total variation, proposed to depress noise and preserve local structures such as edges in the image recovery process. Extensive experiments were performed on 20 subjects, and results show that the proposed method is able to recover the fine details of white matter structures, and outperform other approaches such as interpolation methods, non-local means based upsampling, and total variation based upsampling.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literature
1.
go back to reference Sundgren, P., Dong, Q., Gomez-Hassan, D., Mukherji, S., Maly, P., Welsh, R.: Diffusion tensor imaging of the brain: review of clinical applications. Neuroradiology 46, 339–350 (2004)CrossRef Sundgren, P., Dong, Q., Gomez-Hassan, D., Mukherji, S., Maly, P., Welsh, R.: Diffusion tensor imaging of the brain: review of clinical applications. Neuroradiology 46, 339–350 (2004)CrossRef
2.
go back to reference Chilla, G.S., Tan, C.H., Xu, C., Poh, C.L.: Diffusion weighted magnetic resonance imaging and its recent trend—a survey. Quant. Imaging Med. Surg. 5, 407 (2015) Chilla, G.S., Tan, C.H., Xu, C., Poh, C.L.: Diffusion weighted magnetic resonance imaging and its recent trend—a survey. Quant. Imaging Med. Surg. 5, 407 (2015)
3.
go back to reference Wee, C.-Y., Yap, P.-T., Li, W., Denny, K., Browndyke, J.N., Potter, G.G., Welsh-Bohmer, K.A., Wang, L., Shen, D.: Enriched white matter connectivity networks for accurate identification of MCI patients. Neuroimage 54, 1812–1822 (2011)CrossRef Wee, C.-Y., Yap, P.-T., Li, W., Denny, K., Browndyke, J.N., Potter, G.G., Welsh-Bohmer, K.A., Wang, L., Shen, D.: Enriched white matter connectivity networks for accurate identification of MCI patients. Neuroimage 54, 1812–1822 (2011)CrossRef
4.
go back to reference Wee, C.-Y., Yap, P.-T., Zhang, D., Denny, K., Browndyke, J.N., Potter, G.G., Welsh-Bohmer, K.A., Wang, L., Shen, D.: Identification of MCI individuals using structural and functional connectivity networks. Neuroimage 59, 2045–2056 (2012)CrossRef Wee, C.-Y., Yap, P.-T., Zhang, D., Denny, K., Browndyke, J.N., Potter, G.G., Welsh-Bohmer, K.A., Wang, L., Shen, D.: Identification of MCI individuals using structural and functional connectivity networks. Neuroimage 59, 2045–2056 (2012)CrossRef
5.
go back to reference Shi, F., Yap, P.-T., Gao, W., Lin, W., Gilmore, J.H., Shen, D.: Altered structural connectivity in neonates at genetic risk for schizophrenia: a combined study using morphological and white matter networks. Neuroimage 62, 1622–1633 (2012)CrossRef Shi, F., Yap, P.-T., Gao, W., Lin, W., Gilmore, J.H., Shen, D.: Altered structural connectivity in neonates at genetic risk for schizophrenia: a combined study using morphological and white matter networks. Neuroimage 62, 1622–1633 (2012)CrossRef
6.
go back to reference Brown, R.W., Cheng, Y.-C.N., Haacke, E.M., Thompson, M.R., Venkatesan, R.: Magnetic Resonance Imaging: Physical Principles and Sequence Design. Wiley, New York (2014)CrossRef Brown, R.W., Cheng, Y.-C.N., Haacke, E.M., Thompson, M.R., Venkatesan, R.: Magnetic Resonance Imaging: Physical Principles and Sequence Design. Wiley, New York (2014)CrossRef
7.
go back to reference Van Reeth, E., Tham, I.W., Tan, C.H., Poh, C.L.: Super-resolution in magnetic resonance imaging: a review. Concepts Magn. Reson. Part A 40, 306–325 (2012)CrossRef Van Reeth, E., Tham, I.W., Tan, C.H., Poh, C.L.: Super-resolution in magnetic resonance imaging: a review. Concepts Magn. Reson. Part A 40, 306–325 (2012)CrossRef
8.
go back to reference Yuan, Q., Zhang, L., Shen, H.: Regional spatially adaptive total variation super-resolution with spatial information filtering and clustering. IEEE Trans. Image Process. 22, 2327–2342 (2013)MathSciNetCrossRef Yuan, Q., Zhang, L., Shen, H.: Regional spatially adaptive total variation super-resolution with spatial information filtering and clustering. IEEE Trans. Image Process. 22, 2327–2342 (2013)MathSciNetCrossRef
9.
go back to reference Manjón, J.V., Coupé, P., Buades, A., Fonov, V., Louis Collins, D., Robles, M.: Non-local MRI upsampling. Med. Image Anal. 14, 784–792 (2010)CrossRef Manjón, J.V., Coupé, P., Buades, A., Fonov, V., Louis Collins, D., Robles, M.: Non-local MRI upsampling. Med. Image Anal. 14, 784–792 (2010)CrossRef
10.
go back to reference Scherrer, B., Gholipour, A., Warfield, S.K.: Super-resolution reconstruction to increase the spatial resolution of diffusion weighted images from orthogonal anisotropic acquisitions. Med. Image Anal. 16, 1465–1476 (2012)CrossRef Scherrer, B., Gholipour, A., Warfield, S.K.: Super-resolution reconstruction to increase the spatial resolution of diffusion weighted images from orthogonal anisotropic acquisitions. Med. Image Anal. 16, 1465–1476 (2012)CrossRef
11.
go back to reference Ning, L., Setsompop, K., Michailovich, O., Makris, N., Westin, C.-F., Rathi, Y.: A compressed-sensing approach for super-resolution reconstruction of diffusion MRI. In: Information Processing in Medical Imaging, pp. 57–68. Springer Ning, L., Setsompop, K., Michailovich, O., Makris, N., Westin, C.-F., Rathi, Y.: A compressed-sensing approach for super-resolution reconstruction of diffusion MRI. In: Information Processing in Medical Imaging, pp. 57–68. Springer
12.
go back to reference Alexander, D.C., Zikic, D., Zhang, J., Zhang, H., Criminisi, A.: Image quality transfer via random forest regression: applications in diffusion MRI. In: Medical Image Computing and Computer-Assisted Intervention–MICCAI 2014, pp. 225–232. Springer (2014) Alexander, D.C., Zikic, D., Zhang, J., Zhang, H., Criminisi, A.: Image quality transfer via random forest regression: applications in diffusion MRI. In: Medical Image Computing and Computer-Assisted Intervention–MICCAI 2014, pp. 225–232. Springer (2014)
13.
go back to reference Tarquino, J., Rueda, A., Romero, E.: Shearlet-based sparse representation for super-resolution in diffusion weighted imaging (DWI). In: 2014 IEEE International Conference on Image Processing (ICIP), pp. 3897–3900. IEEE (2014) Tarquino, J., Rueda, A., Romero, E.: Shearlet-based sparse representation for super-resolution in diffusion weighted imaging (DWI). In: 2014 IEEE International Conference on Image Processing (ICIP), pp. 3897–3900. IEEE (2014)
14.
go back to reference Rudin, L.I., Osher, S., Fatemi, E.: Nonlinear total variation based noise removal algorithms. Physica D. Nonlinear Phenomena 60, 259–268 (1992)MathSciNetCrossRefMATH Rudin, L.I., Osher, S., Fatemi, E.: Nonlinear total variation based noise removal algorithms. Physica D. Nonlinear Phenomena 60, 259–268 (1992)MathSciNetCrossRefMATH
15.
16.
go back to reference Liu, J., Musialski, P., Wonka, P., Ye, J.: Tensor completion for estimating missing values in visual data. IEEE Trans. Pattern Anal. Mach. Intell. 35, 208–220 (2013)CrossRef Liu, J., Musialski, P., Wonka, P., Ye, J.: Tensor completion for estimating missing values in visual data. IEEE Trans. Pattern Anal. Mach. Intell. 35, 208–220 (2013)CrossRef
17.
go back to reference Boyd, S., Parikh, N., Chu, E., Peleato, B., Eckstein, J.: Distributed optimization and statistical learning via the alternating direction method of multipliers. Foundations Trends Mach. Learn. 3, 1–122 (2011)CrossRefMATH Boyd, S., Parikh, N., Chu, E., Peleato, B., Eckstein, J.: Distributed optimization and statistical learning via the alternating direction method of multipliers. Foundations Trends Mach. Learn. 3, 1–122 (2011)CrossRefMATH
18.
go back to reference Cai, J.-F., Candès, E.J., Shen, Z.: A singular value thresholding algorithm for matrix completion. SIAM J. Optim. 20, 1956–1982 (2010)MathSciNetCrossRefMATH Cai, J.-F., Candès, E.J., Shen, Z.: A singular value thresholding algorithm for matrix completion. SIAM J. Optim. 20, 1956–1982 (2010)MathSciNetCrossRefMATH
19.
go back to reference Van Essen, D.C., Smith, S.M., Barch, D.M., Behrens, T.E., Yacoub, E., Ugurbil, K., Consortium, W.-M.H.: The WU-Minn human connectome project: an overview. Neuroimage 80, 62–79 (2013)CrossRef Van Essen, D.C., Smith, S.M., Barch, D.M., Behrens, T.E., Yacoub, E., Ugurbil, K., Consortium, W.-M.H.: The WU-Minn human connectome project: an overview. Neuroimage 80, 62–79 (2013)CrossRef
20.
go back to reference Sotiropoulos, S.N., Jbabdi, S., Xu, J., Andersson, J.L., Moeller, S., Auerbach, E.J., Glasser, M.F., Hernandez, M., Sapiro, G., Jenkinson, M.: Advances in diffusion MRI acquisition and processing in the Human Connectome Project. Neuroimage 80, 125–143 (2013)CrossRef Sotiropoulos, S.N., Jbabdi, S., Xu, J., Andersson, J.L., Moeller, S., Auerbach, E.J., Glasser, M.F., Hernandez, M., Sapiro, G., Jenkinson, M.: Advances in diffusion MRI acquisition and processing in the Human Connectome Project. Neuroimage 80, 125–143 (2013)CrossRef
21.
go back to reference Wang, Z., Bovik, A.C., Sheikh, H.R., Simoncelli, E.P.: Image quality assessment: from error visibility to structural similarity. IEEE Trans. Image Process. 13, 600–612 (2004)CrossRef Wang, Z., Bovik, A.C., Sheikh, H.R., Simoncelli, E.P.: Image quality assessment: from error visibility to structural similarity. IEEE Trans. Image Process. 13, 600–612 (2004)CrossRef
Metadata
Title
Super-Resolution Reconstruction of Diffusion-Weighted Images Using 4D Low-Rank and Total Variation
Authors
Feng Shi
Jian Cheng
Li Wang
Pew-Thian Yap
Dinggang Shen
Copyright Year
2016
DOI
https://doi.org/10.1007/978-3-319-28588-7_2

Premium Partner