Skip to main content
Top
Published in:
Cover of the book

2018 | OriginalPaper | Chapter

Uncertainty in Multitask Learning: Joint Representations for Probabilistic MR-only Radiotherapy Planning

Authors : Felix J. S. Bragman, Ryutaro Tanno, Zach Eaton-Rosen, Wenqi Li, David J. Hawkes, Sebastien Ourselin, Daniel C. Alexander, Jamie R. McClelland, M. Jorge Cardoso

Published in: Medical Image Computing and Computer Assisted Intervention – MICCAI 2018

Publisher: Springer International Publishing

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

Multi-task neural network architectures provide a mechanism that jointly integrates information from distinct sources. It is ideal in the context of MR-only radiotherapy planning as it can jointly regress a synthetic CT (synCT) scan and segment organs-at-risk (OAR) from MRI. We propose a probabilistic multi-task network that estimates: (1) intrinsic uncertainty through a heteroscedastic noise model for spatially-adaptive task loss weighting and (2) parameter uncertainty through approximate Bayesian inference. This allows sampling of multiple segmentations and synCTs that share their network representation. We test our model on prostate cancer scans and show that it produces more accurate and consistent synCTs with a better estimation in the variance of the errors, state of the art results in OAR segmentation and a methodology for quality assurance in radiotherapy treatment planning.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literature
1.
go back to reference Burgos, N., et al.: Iterative framework for the joint segmentation and CT synthesis of MR images: application to MRI-only radiotherapy treatment planning. Phys. Med. Biol. 62, 4237 (2017)CrossRef Burgos, N., et al.: Iterative framework for the joint segmentation and CT synthesis of MR images: application to MRI-only radiotherapy treatment planning. Phys. Med. Biol. 62, 4237 (2017)CrossRef
3.
5.
go back to reference Kendall, A., et al.: Multi-task learning using uncertainty to weigh losses for scene geometry and semantics. In: CVPR (2018) Kendall, A., et al.: Multi-task learning using uncertainty to weigh losses for scene geometry and semantics. In: CVPR (2018)
7.
go back to reference Kendall, A., Gal, Y.: What uncertainties do we need in Bayesian deep learning for computer vision? In: NIPS, pp. 5580–5590 (2017) Kendall, A., Gal, Y.: What uncertainties do we need in Bayesian deep learning for computer vision? In: NIPS, pp. 5580–5590 (2017)
8.
go back to reference Gal, Y., Ghahramani, Z.: Dropout as a Bayesian approximation: representing model uncertainty in deep learning. In: ICML, pp. 1050–1059 (2016) Gal, Y., Ghahramani, Z.: Dropout as a Bayesian approximation: representing model uncertainty in deep learning. In: ICML, pp. 1050–1059 (2016)
9.
go back to reference Caruana, R.: Multitask learning: a knowledge-based source of inductive bias. In: ICML (1993) Caruana, R.: Multitask learning: a knowledge-based source of inductive bias. In: ICML (1993)
10.
go back to reference Li, W., Wang, G., Fidon, L., Ourselin, S., Cardoso, M.J., Vercauteren, T.: On the compactness, efficiency, and representation of 3D convolutional networks: brain parcellation as a pretext task. In: Niethammer, M., Styner, M., Aylward, S., Zhu, H., Oguz, I., Yap, P.-T., Shen, D. (eds.) IPMI 2017. LNCS, vol. 10265, pp. 348–360. Springer, Cham (2017). https://doi.org/10.1007/978-3-319-59050-9_28CrossRef Li, W., Wang, G., Fidon, L., Ourselin, S., Cardoso, M.J., Vercauteren, T.: On the compactness, efficiency, and representation of 3D convolutional networks: brain parcellation as a pretext task. In: Niethammer, M., Styner, M., Aylward, S., Zhu, H., Oguz, I., Yap, P.-T., Shen, D. (eds.) IPMI 2017. LNCS, vol. 10265, pp. 348–360. Springer, Cham (2017). https://​doi.​org/​10.​1007/​978-3-319-59050-9_​28CrossRef
11.
go back to reference Gibson, E., et al.: NiftyNet: a deep-learning platform for medical imaging. Comput. Methods Programs Biomed. 158, 113-122 (2018) Gibson, E., et al.: NiftyNet: a deep-learning platform for medical imaging. Comput. Methods Programs Biomed. 158, 113-122 (2018)
Metadata
Title
Uncertainty in Multitask Learning: Joint Representations for Probabilistic MR-only Radiotherapy Planning
Authors
Felix J. S. Bragman
Ryutaro Tanno
Zach Eaton-Rosen
Wenqi Li
David J. Hawkes
Sebastien Ourselin
Daniel C. Alexander
Jamie R. McClelland
M. Jorge Cardoso
Copyright Year
2018
DOI
https://doi.org/10.1007/978-3-030-00937-3_1

Premium Partner