Skip to main content
Erschienen in: Medical & Biological Engineering & Computing 9/2015

01.09.2015 | Original Article

Fast GPU-based computation of spatial multigrid multiframe LMEM for PET

verfasst von: Moulay Ali Nassiri, Jean-François Carrier, Philippe Després

Erschienen in: Medical & Biological Engineering & Computing | Ausgabe 9/2015

Einloggen

Aktivieren Sie unsere intelligente Suche, um passende Fachinhalte oder Patente zu finden.

search-config
loading …

Abstract

Significant efforts were invested during the last decade to accelerate PET list-mode reconstructions, notably with GPU devices. However, the computation time per event is still relatively long, and the list-mode efficiency on the GPU is well below the histogram-mode efficiency. Since list-mode data are not arranged in any regular pattern, costly accesses to the GPU global memory can hardly be optimized and geometrical symmetries cannot be used. To overcome obstacles that limit the acceleration of reconstruction from list-mode on the GPU, a multigrid and multiframe approach of an expectation-maximization algorithm was developed. The reconstruction process is started during data acquisition, and calculations are executed concurrently on the GPU and the CPU, while the system matrix is computed on-the-fly. A new convergence criterion also was introduced, which is computationally more efficient on the GPU. The implementation was tested on a Tesla C2050 GPU device for a Gemini GXL PET system geometry. The results show that the proposed algorithm (multigrid and multiframe list-mode expectation-maximization, MGMF-LMEM) converges to the same solution as the LMEM algorithm more than three times faster. The execution time of the MGMF-LMEM algorithm was 1.1 s per million of events on the Tesla C2050 hardware used, for a reconstructed space of \(188 \times 188\times 57\) voxels of \(2\times 2\times 3.15\,\hbox {mm}^3\). For 17- and 22-mm simulated hot lesions, the MGMF-LMEM algorithm led on the first iteration to contrast recovery coefficients (CRC) of more than 75 % of the maximum CRC while achieving a minimum in the relative mean square error. Therefore, the MGMF-LMEM algorithm can be used as a one-pass method to perform real-time reconstructions for low-count acquisitions, as in list-mode gated studies. The computation time for one iteration and 60 millions of events was approximately 66 s.

Sie haben noch keine Lizenz? Dann Informieren Sie sich jetzt über unsere Produkte:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literatur
1.
Zurück zum Zitat Vandenberghe S, Daube-Witherspoon ME, Lewitt RM, Karp JS (2006) Fast reconstruction of 3D time-of-flight PET data by axial rebinning and transverse mashing. Phys Med Biol 51(6):1603CrossRefPubMed Vandenberghe S, Daube-Witherspoon ME, Lewitt RM, Karp JS (2006) Fast reconstruction of 3D time-of-flight PET data by axial rebinning and transverse mashing. Phys Med Biol 51(6):1603CrossRefPubMed
2.
Zurück zum Zitat Qi J, Leahy RM, Hsu C, Farquhar T, Cherry SR (1998) Fully 3D Bayesian image reconstruction for the ECAT EXACT HR+. IEEE Trans Nucl Sci 45(3):1096CrossRef Qi J, Leahy RM, Hsu C, Farquhar T, Cherry SR (1998) Fully 3D Bayesian image reconstruction for the ECAT EXACT HR+. IEEE Trans Nucl Sci 45(3):1096CrossRef
3.
Zurück zum Zitat Nassiri MA, Hissoiny S, Carrier JF, Després P (2012) Fast GPU-based computation of the sensitivity matrix for a PET list-mode OSEM algorithm. Phys Med Biol 57(19):6279CrossRefPubMed Nassiri MA, Hissoiny S, Carrier JF, Després P (2012) Fast GPU-based computation of the sensitivity matrix for a PET list-mode OSEM algorithm. Phys Med Biol 57(19):6279CrossRefPubMed
4.
Zurück zum Zitat Scheins J, Herzog H, Shah N (2011) Fully-3D PET image reconstruction using scanner-independent, adaptive projection data and highly rotation-symmetric voxel assemblies. IEEE Trans Med Imaging 30(3):879 (ISSN 0278–0062)CrossRefPubMed Scheins J, Herzog H, Shah N (2011) Fully-3D PET image reconstruction using scanner-independent, adaptive projection data and highly rotation-symmetric voxel assemblies. IEEE Trans Med Imaging 30(3):879 (ISSN 0278–0062)CrossRefPubMed
5.
Zurück zum Zitat Zhou J, Qi J (2011) Fast and efficient fully 3D PET image reconstruction using sparse system matrix factorization with GPU acceleration. Phys Med Biol 56(20):6739PubMedCentralCrossRefPubMed Zhou J, Qi J (2011) Fast and efficient fully 3D PET image reconstruction using sparse system matrix factorization with GPU acceleration. Phys Med Biol 56(20):6739PubMedCentralCrossRefPubMed
6.
Zurück zum Zitat Hu Z, Wang W, Gualtieri EE, Hsieh YL, Karp JS, Matej S, Parma M, Tung C, Walsh E, Werner M, Gagnon D (2007) An LOR-based fully-3D PET image reconstruction using a blob-basis function. In: Nuclear Science Symposium Conference Record, 2007. NSS ’07. IEEE, volume 6, pp. 4415–4418. ISSN 1095–7863 Hu Z, Wang W, Gualtieri EE, Hsieh YL, Karp JS, Matej S, Parma M, Tung C, Walsh E, Werner M, Gagnon D (2007) An LOR-based fully-3D PET image reconstruction using a blob-basis function. In: Nuclear Science Symposium Conference Record, 2007. NSS ’07. IEEE, volume 6, pp. 4415–4418. ISSN 1095–7863
7.
Zurück zum Zitat Hong I, Chung S, Kim H, Kim Y, Son Y, Cho Z (2007) Ultra fast symmetry and SIMD-based projection-backprojection (SSP) algorithm for 3-D PET image reconstruction. IEEE Trans Med Imaging 26(6):789CrossRefPubMed Hong I, Chung S, Kim H, Kim Y, Son Y, Cho Z (2007) Ultra fast symmetry and SIMD-based projection-backprojection (SSP) algorithm for 3-D PET image reconstruction. IEEE Trans Med Imaging 26(6):789CrossRefPubMed
8.
Zurück zum Zitat Jacobson MS, Levkovitz R, Ben-Tal A, Thielemans K, Spinks T, Belluzzo D, Pagani E, Bettinardi V, Gilardi M, Zverovich A et al (2000) Enhanced 3D PET OSEM reconstruction using inter-update Metz filtering. Phys Med Biol 45(8):2417CrossRefPubMed Jacobson MS, Levkovitz R, Ben-Tal A, Thielemans K, Spinks T, Belluzzo D, Pagani E, Bettinardi V, Gilardi M, Zverovich A et al (2000) Enhanced 3D PET OSEM reconstruction using inter-update Metz filtering. Phys Med Biol 45(8):2417CrossRefPubMed
9.
Zurück zum Zitat Ranganath M, Dhawan A, Mullani N (1988) A multigrid expectation maximization reconstruction algorithm for positron emission tomography. IEEE Trans Med Imaging 7(4):273CrossRefPubMed Ranganath M, Dhawan A, Mullani N (1988) A multigrid expectation maximization reconstruction algorithm for positron emission tomography. IEEE Trans Med Imaging 7(4):273CrossRefPubMed
10.
Zurück zum Zitat Raheja A, Doniere T, Dhawan A (1999) Multiresolution expectation maximization reconstruction algorithm for positron emission tomography using wavelet processing. IEEE Trans Nucl Sci 46(3):594CrossRef Raheja A, Doniere T, Dhawan A (1999) Multiresolution expectation maximization reconstruction algorithm for positron emission tomography using wavelet processing. IEEE Trans Nucl Sci 46(3):594CrossRef
11.
Zurück zum Zitat Oh S, Milstein AB, Bouman CA, Webb KJ (2005) Multiresolution expectation maximization reconstruction algorithm for positron emission tomography using wavelet processing. IEEE Trans Image Process 14(1):125CrossRefPubMed Oh S, Milstein AB, Bouman CA, Webb KJ (2005) Multiresolution expectation maximization reconstruction algorithm for positron emission tomography using wavelet processing. IEEE Trans Image Process 14(1):125CrossRefPubMed
12.
Zurück zum Zitat Oh S, Bouman CA, Webb KJ (2006) Multigrid tomographic inversion with variable resolution data and image spaces. IEEE Trans Image Process 15(9):2805CrossRefPubMed Oh S, Bouman CA, Webb KJ (2006) Multigrid tomographic inversion with variable resolution data and image spaces. IEEE Trans Image Process 15(9):2805CrossRefPubMed
13.
Zurück zum Zitat Mendes L, Ferreira N, Comtat C (2011) A multiscale-multiframe approach to 3D PET data reconstruction. In: Proceedings of The 11th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine and the 3rd Workshop on High Performance Image Reconstruction, pp. 411–413 Mendes L, Ferreira N, Comtat C (2011) A multiscale-multiframe approach to 3D PET data reconstruction. In: Proceedings of The 11th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine and the 3rd Workshop on High Performance Image Reconstruction, pp. 411–413
14.
Zurück zum Zitat Rahmim A, Cheng JC, Blinder S, Camborde ML, Sossi V (2005) Statistical dynamic image reconstruction in state-of-the-art high-resolution PET. Phys Med Biol 50:4887CrossRefPubMed Rahmim A, Cheng JC, Blinder S, Camborde ML, Sossi V (2005) Statistical dynamic image reconstruction in state-of-the-art high-resolution PET. Phys Med Biol 50:4887CrossRefPubMed
15.
Zurück zum Zitat Matej S, Surti S, Jayanthi S, Daube-Witherspoon ME, Lewitt RM, Karp JS (2009) Efficient 3-D TOF PET reconstruction using view-grouped histo-images: direct image reconstruction for TOF. IEEE Trans Med Imaging 28(5):739PubMedCentralCrossRefPubMed Matej S, Surti S, Jayanthi S, Daube-Witherspoon ME, Lewitt RM, Karp JS (2009) Efficient 3-D TOF PET reconstruction using view-grouped histo-images: direct image reconstruction for TOF. IEEE Trans Med Imaging 28(5):739PubMedCentralCrossRefPubMed
16.
Zurück zum Zitat Grotus N, Reader AJ, Stute S, Rosenwald J, Giraud P, Buvat I (2009) Fully 4D list-mode reconstruction applied to respiratory-gated PET scans. Phys Med Biol 54:1705CrossRefPubMed Grotus N, Reader AJ, Stute S, Rosenwald J, Giraud P, Buvat I (2009) Fully 4D list-mode reconstruction applied to respiratory-gated PET scans. Phys Med Biol 54:1705CrossRefPubMed
17.
Zurück zum Zitat Qi J (2006) Calculation of the sensitivity image in list-mode reconstruction for PET. IEEE Trans Nucl Sci 53(5):2746CrossRef Qi J (2006) Calculation of the sensitivity image in list-mode reconstruction for PET. IEEE Trans Nucl Sci 53(5):2746CrossRef
18.
Zurück zum Zitat Rahmim A, Lenox M, Reader AJ, Michel C, Burbar Z, Ruth TJ, Sossi V (2004) Statistical list-mode image reconstruction for the high resolution research tomograph. Phys Med Biol 49(18):4239CrossRefPubMed Rahmim A, Lenox M, Reader AJ, Michel C, Burbar Z, Ruth TJ, Sossi V (2004) Statistical list-mode image reconstruction for the high resolution research tomograph. Phys Med Biol 49(18):4239CrossRefPubMed
19.
Zurück zum Zitat Carson R, Barker W, Liow J, Johnson C (2003) Design of a motion compensation OSEM list-mode algorithm for resolution-recovery reconstruction for the HRRT. In: Nuclear Science Symposium Conference Record, 2003 IEEE, volume 5, pp. 3281–3285 IEEE Carson R, Barker W, Liow J, Johnson C (2003) Design of a motion compensation OSEM list-mode algorithm for resolution-recovery reconstruction for the HRRT. In: Nuclear Science Symposium Conference Record, 2003 IEEE, volume 5, pp. 3281–3285 IEEE
20.
Zurück zum Zitat Autret A, Bert J, Strauss O, Visvikis D et al (2013) Fully 3D PET list-mode reconstruction including an accurate detector modeling on GPU architecture. In: FULLY 3D 2013: International meeting on fully three dimensional image reconstruction in radiology and nuclear medecine Autret A, Bert J, Strauss O, Visvikis D et al (2013) Fully 3D PET list-mode reconstruction including an accurate detector modeling on GPU architecture. In: FULLY 3D 2013: International meeting on fully three dimensional image reconstruction in radiology and nuclear medecine
21.
Zurück zum Zitat Autret A, Bert J, Zakaria B, Strauss O, Visvikis D, et al (2013) Accurate fully 3D list-mode PET reconstruction on multi-GPUs. In: RITS 2013: Colloque Recherche en imagerie et technologies pour la santé Autret A, Bert J, Zakaria B, Strauss O, Visvikis D, et al (2013) Accurate fully 3D list-mode PET reconstruction on multi-GPUs. In: RITS 2013: Colloque Recherche en imagerie et technologies pour la santé
22.
Zurück zum Zitat Bahi Z, Bert J, Autret A, Visvikis D (2012) High performance multi-GPU acceleration for fully 3D list-mode PET reconstruction. In: IEEE Nuclear Science Symposium and Medical Imaging Conference Record (NSS/MIC) pp. 3390–3393. IEEE Bahi Z, Bert J, Autret A, Visvikis D (2012) High performance multi-GPU acceleration for fully 3D list-mode PET reconstruction. In: IEEE Nuclear Science Symposium and Medical Imaging Conference Record (NSS/MIC) pp. 3390–3393. IEEE
23.
Zurück zum Zitat Bert J, Visvikis D (2011) A fast CPU/GPU ray projector for fully 3d list-mode PET reconstruction. In: Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), 2011 IEEE, pp. 4126–4130. IEEE Bert J, Visvikis D (2011) A fast CPU/GPU ray projector for fully 3d list-mode PET reconstruction. In: Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), 2011 IEEE, pp. 4126–4130. IEEE
24.
Zurück zum Zitat Cui J, Pratx G, Prevrhal S, Levin C (2011) Fully 3D list-mode time-of-flight PET image reconstruction on GPUs using CUDA. Med Phys 38(12):6775CrossRefPubMed Cui J, Pratx G, Prevrhal S, Levin C (2011) Fully 3D list-mode time-of-flight PET image reconstruction on GPUs using CUDA. Med Phys 38(12):6775CrossRefPubMed
25.
Zurück zum Zitat Pratx G, Surti S, Levin C (2011) Fast list-mode reconstruction for time-of-flight PET using graphics hardware. IEEE Trans Nucl Sci 58(1):105CrossRef Pratx G, Surti S, Levin C (2011) Fast list-mode reconstruction for time-of-flight PET using graphics hardware. IEEE Trans Nucl Sci 58(1):105CrossRef
26.
Zurück zum Zitat Pratx G, Chinn G, Olcott PD, Levin C (2009) Fast, accurate and shift-varying line projections for iterative reconstruction using the GPU. IEEE Trans Med Imaging 28(3):435PubMedCentralCrossRefPubMed Pratx G, Chinn G, Olcott PD, Levin C (2009) Fast, accurate and shift-varying line projections for iterative reconstruction using the GPU. IEEE Trans Med Imaging 28(3):435PubMedCentralCrossRefPubMed
27.
Zurück zum Zitat Pratx G, Chinn G, Habte F, Olcott PD, Levin C (2006) Fully 3-D list-mode OSEM accelerated by graphics processing units. In: Nuclear Science Symposium Conference Record, 2006. IEEE, volume. 4 pp. 2196–2202. IEEE Pratx G, Chinn G, Habte F, Olcott PD, Levin C (2006) Fully 3-D list-mode OSEM accelerated by graphics processing units. In: Nuclear Science Symposium Conference Record, 2006. IEEE, volume. 4 pp. 2196–2202. IEEE
28.
Zurück zum Zitat Schellmann M, Gorlatch S, Meilnder D, Ksters T, Schfers K, Wbbeling F, Burger M (2009) Parallel medical image reconstruction: from graphics processors to grids. In: Malyshkin V (ed) Proceedings of the 10th International Conference on Parallel Computing Technologies, Volume 598 of Lecture Notes in Computer Science, pp. 457–473. Springer, Berlin Schellmann M, Gorlatch S, Meilnder D, Ksters T, Schfers K, Wbbeling F, Burger M (2009) Parallel medical image reconstruction: from graphics processors to grids. In: Malyshkin V (ed) Proceedings of the 10th International Conference on Parallel Computing Technologies, Volume 598 of Lecture Notes in Computer Science, pp. 457–473. Springer, Berlin
29.
Zurück zum Zitat Felder T, Blume M, Oliver JF, Rafecas M (2009) ML-EM implementation on a GPU: avoiding simultaneous read-modify-write processes. In: Proceedings of 10th Fully 3D Meeting and 2nd HPIR Workshop, pp. 65–68 Felder T, Blume M, Oliver JF, Rafecas M (2009) ML-EM implementation on a GPU: avoiding simultaneous read-modify-write processes. In: Proceedings of 10th Fully 3D Meeting and 2nd HPIR Workshop, pp. 65–68
30.
Zurück zum Zitat Walker MD, Asselin MC, Julyan P, Feldmann M, Talbot PS, Jones T, Matthews JC (2011) Bias in iterative reconstruction of low-statistics PET data: benefits of a resolution model. Phys Med Biol 56(4):931CrossRefPubMed Walker MD, Asselin MC, Julyan P, Feldmann M, Talbot PS, Jones T, Matthews JC (2011) Bias in iterative reconstruction of low-statistics PET data: benefits of a resolution model. Phys Med Biol 56(4):931CrossRefPubMed
31.
Zurück zum Zitat Qi J, Leahy RM (2006) Iterative reconstruction techniques in emission computed tomography. Phys Med Biol 51:R541CrossRefPubMed Qi J, Leahy RM (2006) Iterative reconstruction techniques in emission computed tomography. Phys Med Biol 51:R541CrossRefPubMed
32.
Zurück zum Zitat Liu X, Comtat C, Michel C, Kinahan PE, Defrise M, Townsend D (2001) Comparison of 3-D reconstruction with 3D-OSEM and with FORE+OSEM for PET. IEEE Trans Med Imaging 20(8):804 ISSN 0278–0062CrossRefPubMed Liu X, Comtat C, Michel C, Kinahan PE, Defrise M, Townsend D (2001) Comparison of 3-D reconstruction with 3D-OSEM and with FORE+OSEM for PET. IEEE Trans Med Imaging 20(8):804 ISSN 0278–0062CrossRefPubMed
33.
Zurück zum Zitat Huang SC (1999) Image oscillation reduction and convergence acceleration for OSEM reconstruction PET imaging. IEEE Trans Nucl Sci 46(3):603 ISSN 0018–9499CrossRef Huang SC (1999) Image oscillation reduction and convergence acceleration for OSEM reconstruction PET imaging. IEEE Trans Nucl Sci 46(3):603 ISSN 0018–9499CrossRef
34.
Zurück zum Zitat Browne J, De Pierro A (1996) A row-action alternative to the EM algorithm for maximizing likelihood in emission tomography. IEEE Trans Med Imaging 15(5):687 ISSN 0278–0062CrossRefPubMed Browne J, De Pierro A (1996) A row-action alternative to the EM algorithm for maximizing likelihood in emission tomography. IEEE Trans Med Imaging 15(5):687 ISSN 0278–0062CrossRefPubMed
35.
Zurück zum Zitat Eklund A, Dufort P, Forsberg D, LaConte SM (2013) Medical image processing on the GPU-Past, present and future. Med Image Anal 17(8):1073CrossRefPubMed Eklund A, Dufort P, Forsberg D, LaConte SM (2013) Medical image processing on the GPU-Past, present and future. Med Image Anal 17(8):1073CrossRefPubMed
36.
37.
Zurück zum Zitat Mendes L, Ferreira N, Comtat C (2012) An overview on the multiscale/multiframe reconstruction for positron emission tomography. In: Bioengineering (ENBENG), 2012 IEEE 2nd Portuguese Meeting in, pp. 1–4 Mendes L, Ferreira N, Comtat C (2012) An overview on the multiscale/multiframe reconstruction for positron emission tomography. In: Bioengineering (ENBENG), 2012 IEEE 2nd Portuguese Meeting in, pp. 1–4
38.
Zurück zum Zitat Lehmann T, Gonner C, Spitzer K (1999) Survey: interpolation methods in medical image processing. IEEE Trans Med Imaging 18(11):1049CrossRefPubMed Lehmann T, Gonner C, Spitzer K (1999) Survey: interpolation methods in medical image processing. IEEE Trans Med Imaging 18(11):1049CrossRefPubMed
39.
Zurück zum Zitat Ruijters D, ter Haar Romeny B, Suetens P (2008) Efficient GPU-based texture interpolation using uniform B-splines. Suetens J Gr GPU Game Tools 13(4):61CrossRef Ruijters D, ter Haar Romeny B, Suetens P (2008) Efficient GPU-based texture interpolation using uniform B-splines. Suetens J Gr GPU Game Tools 13(4):61CrossRef
40.
Zurück zum Zitat Siddon RL (1985) Fast calculation of the exact radiological path for a three-dimensional CT array. Med Phys 12(2):252CrossRefPubMed Siddon RL (1985) Fast calculation of the exact radiological path for a three-dimensional CT array. Med Phys 12(2):252CrossRefPubMed
42.
Zurück zum Zitat Reader AJ, Erlandsson K, Flower MA, Ott RJ (1998) Fast accurate iterative reconstruction for low-statistics positron volume imaging. Phys Med Biol 43:835CrossRefPubMed Reader AJ, Erlandsson K, Flower MA, Ott RJ (1998) Fast accurate iterative reconstruction for low-statistics positron volume imaging. Phys Med Biol 43:835CrossRefPubMed
43.
Zurück zum Zitat Huesman R, Klein G, Moses W, Qi J, Reutter B, Virador PRG (2000) List-mode maximum-likelihood reconstruction applied to positron emission mammography (PEM) with irregular sampling. IEEE Trans Med Imaging 19(5):532CrossRefPubMed Huesman R, Klein G, Moses W, Qi J, Reutter B, Virador PRG (2000) List-mode maximum-likelihood reconstruction applied to positron emission mammography (PEM) with irregular sampling. IEEE Trans Med Imaging 19(5):532CrossRefPubMed
44.
Zurück zum Zitat Gaitanis A, Kontaxakis G, Spyrou G, Panayiotakis G, Tzanakos G (2010) PET image reconstruction: a stopping rule for the MLEM algorithm based on properties of the updating coefficients. Comput Med Imaging Gr 34(2):131CrossRef Gaitanis A, Kontaxakis G, Spyrou G, Panayiotakis G, Tzanakos G (2010) PET image reconstruction: a stopping rule for the MLEM algorithm based on properties of the updating coefficients. Comput Med Imaging Gr 34(2):131CrossRef
45.
Zurück zum Zitat Bissantz N, Mair BA, Munk A (2006) A multi-scale stopping criterion for MLEM reconstructions in PET. In: Nuclear Science Symposium Conference Record, 2006. IEEE, volume 6, pp. 3376–3379 Bissantz N, Mair BA, Munk A (2006) A multi-scale stopping criterion for MLEM reconstructions in PET. In: Nuclear Science Symposium Conference Record, 2006. IEEE, volume 6, pp. 3376–3379
46.
Zurück zum Zitat Llacer J, Veklerov E (1989) Feasible images and practical stopping rules for iterative algorithms in emission tomography. IEEE Trans Med Imaging 8(2):186CrossRefPubMed Llacer J, Veklerov E (1989) Feasible images and practical stopping rules for iterative algorithms in emission tomography. IEEE Trans Med Imaging 8(2):186CrossRefPubMed
47.
Zurück zum Zitat Parker J, Kenyon R, Troxel D (1983) Comparison of interpolating methods for image resampling. IEEE Trans Med Imaging 2(1):31CrossRefPubMed Parker J, Kenyon R, Troxel D (1983) Comparison of interpolating methods for image resampling. IEEE Trans Med Imaging 2(1):31CrossRefPubMed
48.
Zurück zum Zitat Kastis GA, Gaitanis A, Fernandez Y, Kontaxakis G, Fokas AS (2010) Evaluation of a spline reconstruction technique: Comparison with FBP, MLEM and OSEM. In: Nuclear Science Symposium Conference Record (NSS/MIC), 2010 IEEE, pp. 3282–3287 IEEE Kastis GA, Gaitanis A, Fernandez Y, Kontaxakis G, Fokas AS (2010) Evaluation of a spline reconstruction technique: Comparison with FBP, MLEM and OSEM. In: Nuclear Science Symposium Conference Record (NSS/MIC), 2010 IEEE, pp. 3282–3287 IEEE
50.
Zurück zum Zitat Chang JH, Anderson JM, Votaw J (2004) Regularized image reconstruction algorithms for positron emission tomography. IEEE Trans Med Imaging 23(9):1165CrossRefPubMed Chang JH, Anderson JM, Votaw J (2004) Regularized image reconstruction algorithms for positron emission tomography. IEEE Trans Med Imaging 23(9):1165CrossRefPubMed
51.
Zurück zum Zitat Kadrmas DJ (2001) Statistically regulated and adaptive EM reconstruction for emission computed tomography. IEEE Trans Nucl Sci 48(3):790CrossRef Kadrmas DJ (2001) Statistically regulated and adaptive EM reconstruction for emission computed tomography. IEEE Trans Nucl Sci 48(3):790CrossRef
52.
Zurück zum Zitat Wilson DW, Tsui BM, Barrett HH (1994) Noise properties of the EM algorithm. II. Monte Carlo simulations. Phys Med Biol 39(5):847CrossRefPubMed Wilson DW, Tsui BM, Barrett HH (1994) Noise properties of the EM algorithm. II. Monte Carlo simulations. Phys Med Biol 39(5):847CrossRefPubMed
53.
Zurück zum Zitat Hebert T, Leahy R (1989) A generalized EM algorithm for 3-D Bayesian reconstruction from Poisson data using Gibbs priors. IEEE Trans Med Imaging 8(2):194CrossRefPubMed Hebert T, Leahy R (1989) A generalized EM algorithm for 3-D Bayesian reconstruction from Poisson data using Gibbs priors. IEEE Trans Med Imaging 8(2):194CrossRefPubMed
54.
Zurück zum Zitat Nassiri MA, Hissoiny S, Carrier JF, Després P (2011) Fast GPU-based computation of the sensitivity matrix for a PET list-mode OSEM algorithm. In: Proceedings of the 11th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 11-15 July. Potsdam, Germany Nassiri MA, Hissoiny S, Carrier JF, Després P (2011) Fast GPU-based computation of the sensitivity matrix for a PET list-mode OSEM algorithm. In: Proceedings of the 11th International Meeting on Fully Three-Dimensional Image Reconstruction in Radiology and Nuclear Medicine, 11-15 July. Potsdam, Germany
56.
Zurück zum Zitat Lamare F, Turzo A, Bizais Y, Rest CCL, Visvikis D (2006) Validation of a Monte Carlo simulation of the Philips Allegro/GEMINI PET systems using GATE. Phys Med Biol 51(4):943CrossRefPubMed Lamare F, Turzo A, Bizais Y, Rest CCL, Visvikis D (2006) Validation of a Monte Carlo simulation of the Philips Allegro/GEMINI PET systems using GATE. Phys Med Biol 51(4):943CrossRefPubMed
57.
Zurück zum Zitat McLennan A, Reilhac A, Brady M (2009) SORTEO: Monte carlo-based simulator with list-mode capabilities. In: Engineering in Medicine and Biology Society, 2009. EMBC 2009. Annual International Conference of the IEEE, pp. 3751–3754. ISSN 1557–170X McLennan A, Reilhac A, Brady M (2009) SORTEO: Monte carlo-based simulator with list-mode capabilities. In: Engineering in Medicine and Biology Society, 2009. EMBC 2009. Annual International Conference of the IEEE, pp. 3751–3754. ISSN 1557–170X
58.
Zurück zum Zitat De Beenhouwer J, Staelens S, Kruecker D, Ferrer L, DAsseler Y, Lemahieu I, Rannou FR (2007) Cluster computing software for GATE simulations. Med Phys 34(6):1926CrossRefPubMed De Beenhouwer J, Staelens S, Kruecker D, Ferrer L, DAsseler Y, Lemahieu I, Rannou FR (2007) Cluster computing software for GATE simulations. Med Phys 34(6):1926CrossRefPubMed
59.
Zurück zum Zitat National Electrical Manufacturers Association, NEMA NU 2–2007. Performance measurements of positron emission tomographs (2007) National Electrical Manufacturers Association, NEMA NU 2–2007. Performance measurements of positron emission tomographs (2007)
60.
Zurück zum Zitat Cui J, Pratx G, Meng B, Levin C (2013) Distributed MLEM: an iterative tomographic image reconstruction algorithm for distributed memory architectures. IEEE Trans Med Imaging 32(5):957 ISSN 0278–0062CrossRefPubMed Cui J, Pratx G, Meng B, Levin C (2013) Distributed MLEM: an iterative tomographic image reconstruction algorithm for distributed memory architectures. IEEE Trans Med Imaging 32(5):957 ISSN 0278–0062CrossRefPubMed
61.
Zurück zum Zitat Wang W, Hu Z, Gualtieri E, Parma M, Walsh E, Sebok D, Hsieh YL, Tung C, Song X, Griesmer J et al (2006) Systematic and distributed time-of-flight list mode PET reconstruction. In: Nuclear Science Symposium Conference Record, 2006. IEEE, volume 3, pp. 1715–1722. IEEE Wang W, Hu Z, Gualtieri E, Parma M, Walsh E, Sebok D, Hsieh YL, Tung C, Song X, Griesmer J et al (2006) Systematic and distributed time-of-flight list mode PET reconstruction. In: Nuclear Science Symposium Conference Record, 2006. IEEE, volume 3, pp. 1715–1722. IEEE
62.
Zurück zum Zitat Hissoiny S, Ozell B, Bouchard H, Desprs P (2011) GPUMCD: A new GPU-oriented Monte Carlo dose calculation platform. Med Phys 38(2):754 Hissoiny S, Ozell B, Bouchard H, Desprs P (2011) GPUMCD: A new GPU-oriented Monte Carlo dose calculation platform. Med Phys 38(2):754
63.
Zurück zum Zitat Varrone A, Sjholm N, Eriksson L, Gulys B, Halldin C, Farde L (2009) Advancement in PET quantification using 3D-OP-OSEM point spread function reconstruction with the HRRT. Eur J Nucl Med Mol Imaging 36:1639CrossRefPubMed Varrone A, Sjholm N, Eriksson L, Gulys B, Halldin C, Farde L (2009) Advancement in PET quantification using 3D-OP-OSEM point spread function reconstruction with the HRRT. Eur J Nucl Med Mol Imaging 36:1639CrossRefPubMed
Metadaten
Titel
Fast GPU-based computation of spatial multigrid multiframe LMEM for PET
verfasst von
Moulay Ali Nassiri
Jean-François Carrier
Philippe Després
Publikationsdatum
01.09.2015
Verlag
Springer Berlin Heidelberg
Erschienen in
Medical & Biological Engineering & Computing / Ausgabe 9/2015
Print ISSN: 0140-0118
Elektronische ISSN: 1741-0444
DOI
https://doi.org/10.1007/s11517-015-1284-9

Weitere Artikel der Ausgabe 9/2015

Medical & Biological Engineering & Computing 9/2015 Zur Ausgabe