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Erschienen in:
2014 | OriginalPaper | Buchkapitel
Genome-Wide Identification of Non-coding RNAs in Komagatella pastoris str. GS115
verfasst von : Hugo Schneider, Sebastian Bartschat, Gero Doose, Lucas Maciel, Erick Pizani, Marcelo Bassani, Fernando Araripe Torres, Sebastian Will, Tainá Raiol, Marcelo Brígido, Maria Emília Walter, Peter Stadler
Erschienen in: Advances in Bioinformatics and Computational Biology
Verlag: Springer International Publishing
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The methylotrophic yeast
Komagatella pastoris
is a relevant bioengineering platform for protein synthesis. Even though non-coding RNAs are well known to be key players in the control of gene expression no comprehensive annotation of non-coding RNAs has been reported for this species. We combine here published RNA-seq data with a wide array of homology based annotation tools and
de novo
gene predictions to compile the non-coding RNAs in
K. pastoris
.