Skip to main content

2019 | OriginalPaper | Buchkapitel

Ischemic Stroke Lesion Segmentation Using Adversarial Learning

verfasst von : Mobarakol Islam, N. Rajiv Vaidyanathan, V. Jeya Maria Jose, Hongliang Ren

Erschienen in: Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries

Verlag: Springer International Publishing

Aktivieren Sie unsere intelligente Suche, um passende Fachinhalte oder Patente zu finden.

search-config
loading …

Abstract

Ischemic stroke occurs through a blockage of clogged blood vessels supplying blood to the brain. Segmentation of the stroke lesion is vital to improve diagnosis, outcome assessment and treatment planning. In this work, we propose a segmentation model with adversarial learning for ischemic lesion segmentation. We adopt U-Net with skip connection and dropout as segmentation baseline network and a fully connected network (FCN) as discriminator network. Discriminator network consists of 5 convolution layers followed by leaky-ReLU and an upsampling layer to rescale the output to the size of the input map. Training a segmentation network along with an adversarial network can detect and correct higher order inconsistencies between the segmentation maps produced by ground-truth and the Segmentor. We exploit three modalities (CT, DPWI, CBF) of acute computed tomography (CT) perfusion data provided in ISLES 2018 (Ischemic Stroke Lesion Segmentation) for ischemic lesion segmentation. Our model has achieved dice accuracy of 42.10% with the cross-validation of training and 39% with the testing data.

Sie haben noch keine Lizenz? Dann Informieren Sie sich jetzt über unsere Produkte:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literatur
1.
Zurück zum Zitat Bansal, A., Chen, X., Russell, B., Gupta, A., Ramanan, D.: PixelNet: representation of the pixels, by the pixels, and for the pixels. arXiv preprint arXiv:1702.06506 (2017) Bansal, A., Chen, X., Russell, B., Gupta, A., Ramanan, D.: PixelNet: representation of the pixels, by the pixels, and for the pixels. arXiv preprint arXiv:​1702.​06506 (2017)
2.
Zurück zum Zitat Chen, L.-C., Papandreou, G., Kokkinos, I., Murphy, K., Yuille, A.L.: DeepLab: semantic image segmentation with deep convolutional nets, atrous convolution, and fully connected CRFs. IEEE Trans. Pattern Anal. Mach. Intell. 40(4), 834–848 (2018)CrossRef Chen, L.-C., Papandreou, G., Kokkinos, I., Murphy, K., Yuille, A.L.: DeepLab: semantic image segmentation with deep convolutional nets, atrous convolution, and fully connected CRFs. IEEE Trans. Pattern Anal. Mach. Intell. 40(4), 834–848 (2018)CrossRef
4.
Zurück zum Zitat González, R.G., Hirsch, J.A., Koroshetz, W.J., Lev, M.H., Schaefer, P.W.: Acute Ischemic Stroke. Springer, Heidelberg (2011)CrossRef González, R.G., Hirsch, J.A., Koroshetz, W.J., Lev, M.H., Schaefer, P.W.: Acute Ischemic Stroke. Springer, Heidelberg (2011)CrossRef
5.
Zurück zum Zitat Goodfellow, I., et al.: Generative adversarial nets. In: Advances in Neural Information Processing Systems, pp. 2672–2680 (2014) Goodfellow, I., et al.: Generative adversarial nets. In: Advances in Neural Information Processing Systems, pp. 2672–2680 (2014)
6.
Zurück zum Zitat Hung, W.-C., Tsai, Y.-H., Liou, Y.-T., Lin, Y.-Y., Yang, M.-H.: Adversarial learning for semi-supervised semantic segmentation. arXiv preprint arXiv:1802.07934 (2018) Hung, W.-C., Tsai, Y.-H., Liou, Y.-T., Lin, Y.-Y., Yang, M.-H.: Adversarial learning for semi-supervised semantic segmentation. arXiv preprint arXiv:​1802.​07934 (2018)
7.
Zurück zum Zitat Islam, M., Ren, H.: Class balanced pixelnet for neurological image segmentation. In: Proceedings of the 2018 6th International Conference on Bioinformatics and Computational Biology, pp. 83–87. ACM (2018) Islam, M., Ren, H.: Class balanced pixelnet for neurological image segmentation. In: Proceedings of the 2018 6th International Conference on Bioinformatics and Computational Biology, pp. 83–87. ACM (2018)
8.
Zurück zum Zitat Luc, P., Couprie, C., Chintala, S., Verbeek, J.: Semantic segmentation using adversarial networks. arXiv preprint arXiv:1611.08408 (2016) Luc, P., Couprie, C., Chintala, S., Verbeek, J.: Semantic segmentation using adversarial networks. arXiv preprint arXiv:​1611.​08408 (2016)
9.
Zurück zum Zitat Maier, O., et al.: ISLES 2015-a public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI. Med. Image Anal. 35, 250–269 (2017)CrossRef Maier, O., et al.: ISLES 2015-a public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI. Med. Image Anal. 35, 250–269 (2017)CrossRef
10.
Zurück zum Zitat Maier, O., Schröder, C., Forkert, N.D., Martinetz, T., Handels, H.: Classifiers for ischemic stroke lesion segmentation: a comparison study. PloS One 10(12), e0145118 (2015)CrossRef Maier, O., Schröder, C., Forkert, N.D., Martinetz, T., Handels, H.: Classifiers for ischemic stroke lesion segmentation: a comparison study. PloS One 10(12), e0145118 (2015)CrossRef
11.
Zurück zum Zitat Nair, V., Hinton, G.E.: Rectified linear units improve restricted boltzmann machines. In: Proceedings of the 27th International Conference on Machine Learning (ICML-10), pp. 807–814 (2010) Nair, V., Hinton, G.E.: Rectified linear units improve restricted boltzmann machines. In: Proceedings of the 27th International Conference on Machine Learning (ICML-10), pp. 807–814 (2010)
13.
Zurück zum Zitat World Health Organization (WHO), et al.: Cause-specific mortality estimates 2000–2012 (2014) World Health Organization (WHO), et al.: Cause-specific mortality estimates 2000–2012 (2014)
14.
Zurück zum Zitat Winzeck, S., et al.: ISLES 2016 and 2017-benchmarking ischemic stroke lesion outcome prediction based on multispectral MRI. Front. Neurol. 9 (2018) Winzeck, S., et al.: ISLES 2016 and 2017-benchmarking ischemic stroke lesion outcome prediction based on multispectral MRI. Front. Neurol. 9 (2018)
15.
Zurück zum Zitat Zhao, H., Qi, X., Shen, X., Shi, J., Jia, J.: ICNet for real-time semantic segmentation on high-resolution images. arXiv preprint arXiv:1704.08545 (2017) Zhao, H., Qi, X., Shen, X., Shi, J., Jia, J.: ICNet for real-time semantic segmentation on high-resolution images. arXiv preprint arXiv:​1704.​08545 (2017)
16.
Zurück zum Zitat Zhao, H., Shi, J., Qi, X., Wang, X., Jia, J.: Pyramid scene parsing network. In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR), pp. 2881–2890 (2017) Zhao, H., Shi, J., Qi, X., Wang, X., Jia, J.: Pyramid scene parsing network. In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR), pp. 2881–2890 (2017)
Metadaten
Titel
Ischemic Stroke Lesion Segmentation Using Adversarial Learning
verfasst von
Mobarakol Islam
N. Rajiv Vaidyanathan
V. Jeya Maria Jose
Hongliang Ren
Copyright-Jahr
2019
DOI
https://doi.org/10.1007/978-3-030-11723-8_29