Skip to main content

Advertisement

Log in

Urbanization is associated with unique community simplification among birds in a neotropical landscape

  • Research Article
  • Published:
Landscape Ecology Aims and scope Submit manuscript

Abstract

Context

Conversion of land cover by urban expansion is typically thought to reduce functional diversity by homogenizing species composition, at least in well-studied temperate locations. Studies of highly diverse and disturbance-sensitive tropical ecosystems remain rare.

Objectives

By exhaustively surveying resident forest bird communities across an urbanizing Neotropical region we aimed to: (1) assess the patterns and landscape-level correlates of species occurrences in forest habitat; (2) identify trait predictors of species occurrences in urban forest patches; and (3) evaluate the associations between urbanization and phylogenetic and functional diversity.

Methods

We inventoried forest bird communities along the Panama Canal, an area characterized by a strong urbanization gradient from remnant patches surrounded by a densely populated metropolis (Panama City) to extensive tracts of protected rainforest in National Parks. We determined associations of community composition, species traits, and functional and phylogenetic diversity with landscape-level attributes.

Results

In contrast to most previous studies reporting community homogenization, forest patches in urbanized central Panama contained different subsets of resident bird species. Species in forests within in the most urbanized subregions generally were those with strong dispersal abilities, short developmental periods, and recent evolutionary histories. Although species identities varied among urban patches, functional and phylogenetic diversity were similar.

Conclusions

Our results are best characterized by community “simplification”—a loss of species without loss of functional or phylogenetic representation. The dissimilarity of bird community composition among forest patches in urbanized regions appears to be a unique outcome and could be influenced by patch-specific attributes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

Data availability

The datasets generated during and/or analyzed during the current study are available from the corresponding author on reasonable request.

Code availability

The analytical code generated during the current study are available from the corresponding author on reasonable request.

References

  • Alberti M (2010) Maintaining ecological integrity and sustaining ecosystem function in urban areas. Curr Opin Environ Sustain 2:178–184

    Article  Google Scholar 

  • Alberti M, Botsford E, Cohen A (2001) Quantifying the urban gradient: linking urban planning and ecology. In: Avian ecology and conservation in an urbanizing world. Springer, pp 89–115

  • Alexander DE (2002) Nature’s flyers: birds, insects, and the biomechanics of flight. JHU Press

  • ANAM (2003) Informe Final de Resultados de la Cobertura Boscosa y uso del Suelo de la Republica de Panamá: 1992–2000. La Autoridad Nacional para el Ambiente (ANAM) y The International Tropical Timber Organization Panamá

  • Anderson MJ (2006) Distance-based tests for homogeneity of multivariate dispersions. Biometrics 62:245–253

    Article  PubMed  Google Scholar 

  • Anderson MJ (2014) Permutational multivariate analysis of variance (PERMANOVA). Wiley StatsRef Stat Ref Online 1–15

  • Anderson MJ, Crist TO, Chase JM, Vellend M, Inouye BD, Freestone AL, Sanders NJ, Cornell HV, Comita LS, Davies KF, Harrison SP (2011) Navigating the multiple meanings of β diversity: a roadmap for the practicing ecologist. Ecol Lett 14:19–28

  • Arendt WJ, Lane O, Tórrez MA, Castellon JG (2013) First record of Tricoloured Munia (Lonchura malacca) for Nicaragua. Boletin SAO 21(1–5):1–5

    Google Scholar 

  • Aronson MF, La Sorte FA, Nilon CH, Katti M, Goddard MA, Lepczyk CA, Warren PS, Williams NS, Cilliers S, Clarkson B, Dobbs C (2014) A global analysis of the impacts of urbanization on bird and plant diversity reveals key anthropogenic drivers. Proc R Soc B Biol Sci 281:20133330

    Article  Google Scholar 

  • Audet J-N, Ducatez S, Lefebvre L (2015) The town bird and the country bird: problem solving and immunocompetence vary with urbanization. Behav Ecol 27:637–644

    Article  Google Scholar 

  • Barbosa KV, de C, Rodewald, Ribeiro AD, Jahn MC AE (2020) Noise level and water distance drive resident and migratory bird species richness within a Neotropical megacity. Landsc Urban Plan 197:103769

    Article  Google Scholar 

  • Batáry P, Kurucz K, Suarez-Rubio M, Chamberlain DE (2018) Non‐linearities in bird responses across urbanization gradients: a meta‐analysis. Glob Change Biol 24:1046–1054

    Article  Google Scholar 

  • Batten LA (1972) Breeding bird species diversity in relation to increasing urbanisation. Bird Study 19:157–166

    Article  Google Scholar 

  • Beissinger SR, Osborne DR (1982) Effects of urbanization on avian community organization. The Condor 84:75–83

    Article  Google Scholar 

  • BirdLife International (2013) State of the World’s Birds: indicators for our changing world. BirdLife International, Cambridge

    Google Scholar 

  • Blair RB (1996) Land use and avian species diversity along an urban gradient. Ecol Appl 6:506–519

    Article  Google Scholar 

  • Blair RB (2001) Birds and butterflies along urban gradients in two ecoregions of the United States: is urbanization creating a homogeneous fauna? In: Biotic homogenization. Springer, pp 33–56

  • Blanchet FG, Cazelles K, Gravel D (2020) Co-occurrence is not evidence of ecological interactions. Ecol Lett 23:1050–1063

    Article  PubMed  Google Scholar 

  • Bradley CA, Altizer S (2007) Urbanization and the ecology of wildlife diseases. Trends Ecol Evol 22:95–102

    Article  PubMed  Google Scholar 

  • Breiman L, Friedman J, Olshen R, Stone C (1984) Classification and regression trees. Wadsworth Int Group 37:237–251

    Google Scholar 

  • Cadotte MW, Dinnage R, Tilman D (2012) Phylogenetic diversity promotes ecosystem stability. Ecology 93:S223–S233

    Article  Google Scholar 

  • Calegaro-Marques C, Amato SB (2014) Urbanization breaks up host-parasite interactions: a case study on parasite community ecology of Rufous-bellied Thrushes (Turdus rufiventris) along a rural-urban gradient. PLoS ONE 9:e103144

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Callaghan CT, Major RE, Wilshire JH, Martin JM, Kingsford RT, Cornwell WK (2019) Generalists are the most urban-tolerant of birds: a phylogenetically controlled analysis of ecological and life history traits using a novel continuous measure of bird responses to urbanization. Oikos 128:845–858

    Article  Google Scholar 

  • Cam E, Nichols JD, Sauer JR, Hines JE, Flather CH (2000) Relative species richness and community completeness: birds and urbanization in the mid-Atlantic states. Ecol Appl 10:1196–1210

    Article  Google Scholar 

  • Chace JF, Walsh JJ (2006) Urban effects on native avifauna: a review. Landsc Urban Plan 74:46–69

    Article  Google Scholar 

  • Chamberlain DE, Cannon AR, Toms MP, Leech DI, Hatchwell BJ, Gaston KJ (2009) Avian productivity in urban landscapes: a review and meta-analysis. Ibis 151:1–18

    Article  Google Scholar 

  • Chamberlain D, Kibuule M, Skeen R, Pomeroy D (2017) Trends in bird species richness, abundance and biomass along a tropical urbanization gradient. Urban Ecosyst 20:629–638

    Article  Google Scholar 

  • Chao A, Chiu C-H (2016) Species Richness: Estimation and Comparison. In: Wiley StatsRef: Statistics Reference Online. American Cancer Society, pp 1–26

  • Chao A, Colwell RK, Lin C-W, Gotelli NJ (2009) Sufficient sampling for asymptotic minimum species richness estimators. Ecology 90:1125–1133

    Article  PubMed  Google Scholar 

  • Cho A (2001) Panama’s Canal Holds Visions of New Growth. ENR 247

  • Cincotta RP, Wisnewski J, Engelman R (2000) Human population in the biodiversity hotspots. Nature 404:990

    Article  CAS  PubMed  Google Scholar 

  • Clarke KR, Ainsworth M (1993) A method of linking multivariate community structure to environmental variables. Mar Ecol-Prog Ser 92:205–205

    Article  Google Scholar 

  • Clarke KR, Warwick RM (1998) Quantifying structural redundancy in ecological communities. Oecologia 113:278–289

    Article  CAS  PubMed  Google Scholar 

  • Clergeau P, Savard J-PL, Mennechez G, Falardeau G (1998) Bird abundance and diversity along an urban-rural gradient: a comparative study between two cities on different continents. The Condor 100:413–425

    Article  Google Scholar 

  • Clergeau P, Jokimäki J, Savard J-PL (2001) Are urban bird communities influenced by the bird diversity of adjacent landscapes? J Appl Ecol 38:1122–1134

    Article  Google Scholar 

  • Collen B, Turvey ST, Waterman C, Meredith HM, Kuhn TS, Baillie JE, Isaac NJ (2011) Investing in evolutionary history: implementing a phylogenetic approach for mammal conservation. Philos Trans R Soc B Biol Sci 366:2611–2622

    Article  Google Scholar 

  • Condit R, Robinson WD, Ibáñez R, Aguilar S, Sanjur A, Martínez R, Stallard RF, García T, Angehr GR, Petit L, Wright SJ (2001) The status of the Panama Canal watershed and its biodiversity at the beginning of the 21st century: long-term ecological studies reveal a diverse flora and fauna near the Panama Canal, harbored within a corridor of forest stretching from the Caribbean to the Pacific, but deforestation, land degradation, erosion, and overhunting remain threats. Bioscience 51:389–398

    Article  Google Scholar 

  • Crooks KR, Suarez AV, Bolger DT (2004) Avian assemblages along a gradient of urbanization in a highly fragmented landscape. Biol Conserv 115:451–462

    Article  Google Scholar 

  • Curtis JR, Robinson WD, Rompré G, Moore RP, McCune B (2021) Erosion of tropical bird diversity over a century is influenced by abundance, diet and subtle climatic tolerances. Sci Rep 11:10045

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • De’ath G, (2007) Boosted trees for ecological modeling and prediction. Ecology 88:243–251

    Article  Google Scholar 

  • Delgado-V CA, French K (2012) Parasite–bird interactions in urban areas: current evidence and emerging questions. Landsc Urban Plan 105:5–14

    Article  Google Scholar 

  • Derrickson EM, Ricklefs RE (1988) Taxon-dependent diversification of life-history traits and the perception of phylogenetic constraints. Funct Ecol 417–423

  • Devictor V, Julliard R, Couvet D, Lee A, Jiguet F (2007) Functional homogenization effect of urbanization on bird communiites. Conserv Biol 21:741–751

    Article  PubMed  Google Scholar 

  • Devictor V, Mouillot D, Meynard C, Jiguet F, Thuiller W, Mouquet N (2010) Spatial mismatch and congruence between taxonomic, phylogenetic and functional diversity: the need for integrative conservation strategies in a changing world. Ecol Lett 13:1030–1040

    PubMed  Google Scholar 

  • Dunn RR, Gavin MC, Sanchez MC, Solomon JN (2006) The pigeon paradox: dependence of global conservation on urban nature. Conserv Biol 20:1814–1816

    Article  PubMed  Google Scholar 

  • Edwards DP, Gilroy JJ, Thomas GH, Uribe CA, Haugaasen T (2015) Land-sparing agriculture best protects avian phylogenetic diversity. Curr Biol 25:2384–2391

    Article  CAS  PubMed  Google Scholar 

  • Elith J, Leathwick J (2017) Boosted Regression Trees for ecological modeling. R Doc Available Httpscran R-Proj Orgwebpackagesdismovignettesbrt Pdf

  • Elith J, Leathwick JR, Hastie T (2008) A working guide to boosted regression trees. J Anim Ecol 77:802–813

    Article  CAS  PubMed  Google Scholar 

  • Escobar-Ibáñez JF, MacGregor-Fors I (2017) What’s new? An updated review of avian ecology in urban Latin America. In: Avian ecology in Latin American cityscapes. Springer, pp 11–31

  • Evans KL, Chamberlain DE, Hatchwell BJ, Gregory RD, Gaston KJ (2011) What makes an urban bird? Glob Change Biol 17:32–44

    Article  Google Scholar 

  • Faeth SH, Saari S, Bang C (2001) Urban biodiversity: patterns, processes and implications for conservation. E LS

  • Faith DP (1992) Conservation evaluation and phylogenetic diversity. Biol Conserv 61:1–10

    Article  Google Scholar 

  • Filloy J, Grosso S, Bellocq MI (2015) Urbanization altered latitudinal patterns of bird diversity-environment relationships in the southern Neotropics. Urban Ecosyst 18:777–791

    Article  Google Scholar 

  • Fischer JD, Schneider SC, Ahlers AA, Miller JR (2015) Categorizing wildlife responses to urbanization and conservation implications of terminology. Conserv Biol 29:1246–1248

    Article  PubMed  Google Scholar 

  • Flynn DF, Mirotchnick N, Jain M, Palmer MI, Naeem S (2011) Functional and phylogenetic diversity as predictors of biodiversity–ecosystem-function relationships. Ecology 92:1573–1581

    Article  PubMed  Google Scholar 

  • Fontana CS, Burger MI, Magnusson WE (2011) Bird diversity in a subtropical South-American City: effects of noise levels, arborisation and human population density. Urban Ecosyst 14:341–360

    Article  Google Scholar 

  • Friedman JH, Meulman JJ (2003) Multiple additive regression trees with application in epidemiology. Stat Med 22:1365–1381

    Article  PubMed  Google Scholar 

  • Friedman J, Hastie T, Tibshirani R (2000) Additive logistic regression: a statistical view of boosting (with discussion and a rejoinder by the authors). Ann Stat 28:337–407

    Article  Google Scholar 

  • Frishkoff LO, Karp DS, M’Gonigle LK, Mendenhall CD, Zook J, Kremen C, Hadly EA, Daily GC (2014) Loss of avian phylogenetic diversity in neotropical agricultural systems. Science 345:1343

    Article  CAS  PubMed  Google Scholar 

  • Gaston KJ, Blackburn TM, Goldewijk KK (2003) Habitat conversion and global avian biodiversity loss. Proc R Soc Lond B Biol Sci 270:1293–1300

    Article  Google Scholar 

  • General Comptroller of the Panama Republic (2013) Bulletin 16. Estimates and projections of the Total Population of the Country, by Province, Indigenous Region, District and township, according to sex and age: years 2010-20. Instituto Nacional de Estadística y Censo, Contraloría General de la República de Panamá., Republica de Panama

  • Gibson L, Lee TM, Koh LP, Brook BW, Gardner TA, Barlow J, Peres CA, Bradshaw CJ, Laurance WF, Lovejoy TE, Sodhi NS (2011) Primary forests are irreplaceable for sustaining tropical biodiversity. Nature 478:378–381

    Article  CAS  PubMed  Google Scholar 

  • Glennon MJ, Porter WF (2005) Effects of land use management on biotic integrity: an investigation of bird communities. Biol Conserv 126:499–511

    Article  Google Scholar 

  • Gower JC (1971) A general coefficient of similarity and some of its properties. Biometrics 857–871

  • Grimm NB, Faeth SH, Golubiewski NE, Redman CL, Wu J, Bai X, Briggs JM (2008) Global change and the ecology of cities. Science 319:756–760

    Article  CAS  PubMed  Google Scholar 

  • Haddad NM, Brudvig LA, Clobert J, Davies KF, Gonzalez A, Holt RD, Lovejoy TE, Sexton JO, Austin MP, Collins CD, Cook WM (2015) Habitat fragmentation and its lasting impact on Earth’s ecosystems. Sci Adv 1:e1500052

    Article  PubMed  PubMed Central  Google Scholar 

  • Hamilton TH (1961) The adaptive significances of intraspecific trends of variation in wing length and body size among bird species. Evolution 15:180–195

    Article  Google Scholar 

  • Hanski I, Gilpin ME, McCauley DE (1997) Metapopulation biology. Elsevier

  • Hanski I, Zurita GA, Bellocq MI, Rybicki J (2013) Species–fragmented area relationship. Proc Natl Acad Sci 110:12715

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Hedenström A (1992) Flight performance in relation to fuel load in birds. J Theor Biol 158:535–537

    Article  Google Scholar 

  • Heilig GK (1994) Neglected dimensions of global land-use change: reflections and data. Popul Dev Rev 831–859

  • Hijmans RJ, Phillips S, Leathwick J, Elith J (2017) dismo: Species Distribution Modeling

  • Ibarra-Macias A, Robinson WD, Gaines MS (2011) Experimental evaluation of bird movements in a fragmented Neotropical landscape. Biol Conserv 144:703–712

    Article  Google Scholar 

  • Iriarte JA, Lobos GA, Jaksic FM (2005) Invasive vertebrate species in Chile and their control and monitoring by governmental agencies. Rev Chil Hist Nat 78:143–154

    Google Scholar 

  • IUCN (2019) The IUCN Red List of Threatened Species. Version 2019-2

  • Jetz W, Thomas GH, Joy JB, Hartmann K, Mooers AO (2012) The global diversity of birds in space and time. Nature 491:444

    Article  CAS  PubMed  Google Scholar 

  • Jokimäki J, Suhonen J, Jokimäki-Kaisanlahti M-L, Carbó-Ramírez P (2016) Effects of urbanization on breeding birds in European towns: impacts of species traits. Urban Ecosyst 19:1565–1577

    Article  Google Scholar 

  • Kark S, Iwaniuk A, Schalimtzek A, Banker E (2007) Living in the city: can anyone become an ‘urban exploiter’? J Biogeogr 34:638–651

    Article  Google Scholar 

  • Kembel SW, Cowan PD, Helmus MR, Cornwell WK, Morlon H, Ackerly DD, Blomberg SP, Webb CO (2010) Picante: R tools for integrating phylogenies and ecology. Bioinformatics 26:1463–1464

    Article  CAS  PubMed  Google Scholar 

  • Kruskal JB (1964) Nonmetric multidimensional scaling: a numerical method. Psychometrika 29:115–129

    Article  Google Scholar 

  • Laliberté E, Legendre P (2010) A distance-based framework for measuring functional diversity from multiple traits. Ecology 91:299–305

    Article  PubMed  Google Scholar 

  • Lambin EF, Turner BL, Geist HJ, Agbola SB, Angelsen A, Bruce JW, Coomes OT, Dirzo R, Fischer G, Folke C, George P (2001) The causes of land-use and land-cover change: moving beyond the myths. Glob Environ Change 11:261–269

    Article  Google Scholar 

  • Lambin EF, Geist HJ, Lepers E (2003) Dynamics of land-use and land-cover change in tropical regions. Annu Rev Environ Resour 28:205–241

    Article  Google Scholar 

  • Lancaster RK, Rees WE (1979) Bird communities and the structure of urban habitats. Can J Zool 57:2358–2368

    Article  Google Scholar 

  • Laurance WF (2008) Theory meets reality: how habitat fragmentation research has transcended island biogeographic theory. Biol Conserv 141:1731–1744

    Article  Google Scholar 

  • Laurance WF, Bierregaard RO (1997) Tropical forest remnants: ecology, management, and conservation of fragmented communities. University of Chicago Press

  • Lees AC, Peres CA (2009) Gap-crossing movements predict species occupancy in Amazonian forest fragments. Oikos 118:280–290

    Article  Google Scholar 

  • Leveau CM, Leveau LM (2005) Avian community response to urbanization in the Pampean region, Argentina. Ornitol Neotrop 16:503–510

    Google Scholar 

  • Leveau LM, Zuria I (2017) Flocking the city: avian demography and population dynamics in urban Latin America. In: Avian Ecology in Latin American Cityscapes. Springer, pp 57–77

  • Leveau LM, Leveau CM, Villegas M, Cursach JA, Suazo CG (2017) Bird communities along urbanization gradients: a comparative analysis among three Neotropical cities. Ornitol Neotropical 28:77–87

    Google Scholar 

  • Losos JB (2008) Phylogenetic niche conservatism, phylogenetic signal and the relationship between phylogenetic relatedness and ecological similarity among species. Ecol Lett 11:995–1003

    Article  PubMed  Google Scholar 

  • Losos JB, Ricklefs RE (2009) The theory of island biogeography revisited. Princeton University Press

  • MacArthur RH (1965) Patterns of species diversity. Biol Rev 40:510–533

    Article  Google Scholar 

  • MacArthur RH, Wilson EO (1967) The theory of island biogeography. Princeton university press

  • MacGregor-Fors I, García-Arroyo M (2017) Who is who in the city? Bird species richness and composition in urban Latin America. In: Avian Ecology in Latin American Cityscapes. Springer, pp 33–55

  • Maklakov AA, Immler S, Gonzalez-Voyer A, Rönn J, Kolm N (2011) Brains and the city: big-brained passerine birds succeed in urban environments. Biol Lett 7:730–732

    Article  PubMed  PubMed Central  Google Scholar 

  • Maria A, Acero JL, Aguilera AI, Lozano MG (2017) Central America urbanization review: making cities work for Central America. The World Bank

  • Martensen AC, Pimentel RG, Metzger JP (2008) Relative effects of fragment size and connectivity on bird community in the Atlantic Rain Forest: implications for conservation. Biol Conserv 141:2184–2192

    Article  Google Scholar 

  • Marzluff JM (2001) Worldwide urbanization and its effects on birds. In: Avian ecology and conservation in an urbanizing world. Springer, pp 19–47

  • McCune B, Grace JB (2002) Analysis of Ecological Communities. MjM Software Design

  • McCune B, Mefford MJ (2011) PC-ORD. Multivariate Analysis of Ecological Data. Version 6.12. MjM Software, Gleneden Beach, Oregon

  • McDonnell MJ, Pickett ST, Groffman P, Bohlen P, Pouyat RV, Zipperer WC, Parmelee RW, Carriero MM, Medley K (2008) Ecosystem processes along an urban-to-rural gradient. In: Urban Ecology. Springer, pp 299–313

  • McKee JK, Sciulli PW, Fooce CD, Waite TA (2004) Forecasting global biodiversity threats associated with human population growth. Biol Conserv 115:161–164

    Article  Google Scholar 

  • McKinney ML (2002) Urbanization, Biodiversity, and ConservationThe impacts of urbanization on native species are poorly studied, but educating a highly urbanized human population about these impacts can greatly improve species conservation in all ecosystems. Bioscience 52:883–890

    Article  Google Scholar 

  • McKinney ML (2006) Urbanization as a major cause of biotic homogenization. Biol Conserv 127:247–260

    Article  Google Scholar 

  • McKinney ML (2008) Effects of urbanization on species richness: a review of plants and animals. Urban Ecosyst 11:161–176

    Article  Google Scholar 

  • Møller AP, Erritzøe J (2015) Brain size and urbanization in birds. Avian Res 6:8

    Article  Google Scholar 

  • Møller AP, Díaz M, Flensted-Jensen E, Grim T, Ibáñez-Álamo JD, Jokimäki J, Mänd R, Markó G, Tryjanowski P (2015) Urbanized birds have superior establishment success in novel environments. Oecologia 178:943–950

    Article  PubMed  Google Scholar 

  • Monnet AC, Jiguet F, Meynard CN, Mouillot D, Mouquet N, Thuiller W, Devictor V (2014) Asynchrony of taxonomic, functional and phylogenetic diversity in birds. Glob Ecol Biogeogr 23:780–788

    Article  PubMed  PubMed Central  Google Scholar 

  • Moore RP, Robinson WD, Lovette IJ, Robinson TR (2008) Experimental evidence for extreme dispersal limitation in tropical forest birds. Ecol Lett 11:960–968

    Article  CAS  PubMed  Google Scholar 

  • Moreno CE, Calderón‐Patrón JM, Martín-Regalado N, Martínez‐Falcón AP, Ortega‐Martínez IJ, Rios‐Díaz CL, Rosas F (2018) Measuring species diversity in the tropics: a review of methodological approaches and framework for future studies. Biotropica 50:929–941

    Article  Google Scholar 

  • Mörtberg UM (2001) Resident bird species in urban forest remnants; landscape and habitat perspectives. Landsc Ecol 16:193–203

    Article  Google Scholar 

  • Müller D, Leitão PJ, Sikor T (2013) Comparing the determinants of cropland abandonment in Albania and Romania using boosted regression trees. Agric Syst 117:66–77

    Article  Google Scholar 

  • O’Connell TJ, Jackson LE, Brooks RP (2000) Bird guilds as indicators of ecological condition in the Central Appalachians. Ecol Appl 10:1706–1721

    Article  Google Scholar 

  • Oksanen FJ, Blanchet G, Friendly M, Kindt R, Legendre P, McGlinn D, Minchin PR, O'Hara RB, Simpson GL, Solymos P, Stevens MHH, Szoecs E, Wagner H (2020). vegan: Community Ecology Package. R package version 2.5-7. https://CRAN.R-project.org/package=vegan

  • Olden JD (2006) Biotic homogenization: a new research agenda for conservation biogeography. J Biogeogr 33:2027–2039

    Article  Google Scholar 

  • Ortega-Álvarez R, MacGregor-Fors I (2009) Living in the big city: effects of urban land-use on bird community structure, diversity, and composition. Landsc Urban Plan 90:189–195

    Article  Google Scholar 

  • Ortega-Álvarez R, MacGregor-Fors I (2011a) Dusting-off the file: A review of knowledge on urban ornithology in Latin America. Landsc Urban Plan 101:1–10

    Article  Google Scholar 

  • Ortega-Álvarez R, MacGregor-Fors I (2011b) Spreading the word: the ecology of urban birds outside the United States, Canada, and Western Europe. Auk 128:415–418

    Article  Google Scholar 

  • Pagel M (1999) Inferring the historical patterns of biological evolution. Nature 401:877–884

    Article  CAS  PubMed  Google Scholar 

  • Panama Canal Authority (ACP), Meteorology and Hydrology Branch (2016) http://www.pancanal.com. Accessed 30 Oct 2016

  • Pavoine S, Ollier S, Dufour A-B (2005) Is the originality of a species measurable? Ecol Lett 8:579–586

    Article  Google Scholar 

  • Pellissier V, Barnagaud JY, Kissling WD, Şekercioğlu Ç, Svenning JC (2018) Niche packing and expansion account for species richness–productivity relationships in global bird assemblages. Glob Ecol Biogeogr 27:604–615

    Article  Google Scholar 

  • Pena JC, Martello F, Ribeiro MC, Armitage RA, Young RJ, Rodrigues (2017) Street trees reduce the negative effects of urbanization on birds. PLOS ONE 12:e0174484

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Pennycuick CJ (2008) Modelling the flying bird. Elsevier

  • Petit LJ, Petit DR, Christian DG, Powell HD (1999) Bird communities of natural and modified habitats in Panama. Ecography 22:292–304

    Article  Google Scholar 

  • Pigot AL, Trisos CH, Tobias JA (2016) Functional traits reveal the expansion and packing of ecological niche space underlying an elevational diversity gradient in passerine birds. Proc R Soc B Biol Sci 283:20152013

    Article  CAS  Google Scholar 

  • Pyke CR, Condit R, Aguilar S, Lao S (2001) Floristic composition across a climatic gradient in a neotropical lowland forest. J Veg Sci 12:553–566

    Article  Google Scholar 

  • R Core Team (2019) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna

    Google Scholar 

  • Redding DW, Hartmann K, Mimoto A, Bokal D, DeVos M, Mooers AØ (2008) Evolutionarily distinctive species often capture more phylogenetic diversity than expected. J Theor Biol 251:606–615

    Article  PubMed  Google Scholar 

  • Redding DW, DeWOLFF CV, Mooers AØ (2010) Evolutionary distinctiveness, threat status, and ecological oddity in primates. Conserv Biol 24:1052–1058

    Article  PubMed  Google Scholar 

  • Ricklefs RE (1969) The nesting cycle of songbirds in tropical and temperate regions. Living Bird 8:165–175

    Google Scholar 

  • Robinson WD, Angehr GR, Robinson TR, Petit LJ, Petit DR, Brawn JD (2004) Distribution of bird diversity in a vulnerable neotropical landscape. Conserv Biol 18:510–518

    Article  Google Scholar 

  • Rompré G, Douglas Robinson W, Desrochers A, Angehr G (2007) Environmental correlates of avian diversity in lowland Panama rain forests: environmental correlates of avian diversity. J Biogeogr 34:802–815

    Article  Google Scholar 

  • Rompré G, Robinson WD, Desrochers A (2008) Causes of habitat loss in a Neotropical landscape: the Panama Canal corridor. Landsc Urban Plan 87:129–139

    Article  Google Scholar 

  • Rompré G, Robinson WD, Desrochers A, Angehr G (2009) Predicting declines in avian species richness under nonrandom patterns of habitat loss in a Neotropical landscape. Ecol Appl 19:1614–1627

    Article  PubMed  Google Scholar 

  • Rosauer D, Tucker CM, Cadotte MW, Carvalho SB, Davies TJ, Ferrier S, Fritz SA, Grenyer R, Helmus MR, Jin LS, Mooers AO (2017) A guide to phylogenetic metrics for conservation, community ecology and macroecology. Biol Rev 92:698–715

    Article  PubMed  Google Scholar 

  • Santiago-Alarcon D, Delgado-V CA (2017) Warning! Urban threats for birds in Latin America. In: Avian Ecology in Latin American Cityscapes. Springer, pp 125–142

  • Scheiner SM, Kosman E, Presley SJ, Willig MR (2017) Decomposing functional diversity. Methods Ecol Evol 8:809–820

    Article  Google Scholar 

  • Schliep KP (2011) phangorn: phylogenetic analysis in R. Bioinformatics 27:592–593

    Article  CAS  PubMed  Google Scholar 

  • Sekercioglu C, Daily GC, Ehrlich PR (2004) Ecosystem consequences of bird declines. Proc Natl Acad Sci 101:18042–18047

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Sodhi N, Sekercioglu C, Barlow J, Robinson S (2011) Biotic invasions and tropical birds. pp 126–151

  • Sol D, Maspons J, Vall-Llosera M, Bartomeus I, García-Peña GE, Piñol J, Freckleton RP (2012) Unraveling the life history of successful invaders. Science 337:580–583

    Article  CAS  PubMed  Google Scholar 

  • Sol D, González-Lagos C, Moreira D, Maspons J (2013) Measuring tolerance to urbanization for comparative analyses. Ardeola 60:3–14

    Article  Google Scholar 

  • Sol D, González‐Lagos C, Moreira D, Maspons J, Lapiedra O (2014) Urbanisation tolerance and the loss of avian diversity. Ecol Lett 17:942–950

    Article  PubMed  Google Scholar 

  • Sol D, Bartomeus I, González-Lagos C, Pavoine S (2017) Urbanisation and the loss of phylogenetic diversity in birds. Ecol Lett 20:721–729

    Article  PubMed  Google Scholar 

  • Stotz DF, Fitzpatrick JW, Parker TA III, Moskovits DK (1996) Neotropical birds: ecology and conservation. University of Chicago Press

  • Stratford JA, Robinson WD (2005) Gulliver travels to the fragmented tropics: geographic variation in mechanisms of avian extinction. Front Ecol Environ 3:85–92

    Article  Google Scholar 

  • Suarez-Rubio M, Thomlinson JR (2009) Landscape and patch-level factors influence bird communities in an urbanized tropical island. Biol Conserv 142:1311–1321

    Article  Google Scholar 

  • Turner IM, Corlett RT (1996) The conservation value of small, isolated fragments of lowland tropical rain forest. Trends Ecol Evol 11:330–333

    Article  CAS  PubMed  Google Scholar 

  • United Nations (2018) World urbanization prospects: the 2018 revision, key facts

  • Wang J, Zhou W, Pickett ST, Yu W, Li W (2019) A multiscale analysis of urbanization effects on ecosystem services supply in an urban megaregion. Sci Total Environ 662:824–833

    Article  CAS  PubMed  Google Scholar 

  • Watson DM (2003) The ‘standardized search’: an improved way to conduct bird surveys. Austral Ecol 28:515–525

    Article  Google Scholar 

  • Webb CO, Ackerly DD, McPeek MA, Donoghue MJ (2002) Phylogenies and community ecology. Annu Rev Ecol Syst 33:475–505

    Article  Google Scholar 

  • Wikelski M, Ricklefs RE (2001) The physiology of life histories. Trends Ecol Evol 16:479–481

    Article  Google Scholar 

  • Williams JB, Miller RA, Harper JM, Wiersma P (2010) Functional linkages for the pace of life, life-history, and environment in birds. Integr Comp Biol 50:855–868

    Article  PubMed  PubMed Central  Google Scholar 

  • Willis EO (1974) Populations and local extinctions of birds on Barro Colorado Island, Panama. Ecol Monogr 44:153–169

    Article  Google Scholar 

  • Winter M, Devictor V, Schweiger O (2013) Phylogenetic diversity and nature conservation: where are we? Trends Ecol Evol 28:199–204

    Article  PubMed  Google Scholar 

  • Witter MS, Cuthill IC (1993) The ecological costs of avian fat storage. Philos Trans R Soc Lond B Biol Sci 340:73–92

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

We thank the Achievement Rewards for College Scientists (ARCS) Foundation Oregon Chapter, Oregon Lottery, Thomas G. Scott, the Coombs-Simpson Memorial Fellowship, the Bob and Phyllis Mace Professorship, and the OSU Department of Fisheries, Wildlife and Conservation Sciences for financial support of this project. J.R.C. was supported by an ARCS Scholar Award donation from Bettsy Preble, Laurie Griff, and Hilary Gripekoven. We thank the Panamanian government and the Smithsonian Tropical Research Institute (STRI) for allowing us to conduct research within Canal area forests.

Funding

Partial financial support for this study was received from Achievement Rewards for College Scientists (ARCS) Foundation Oregon Chapter, Oregon Lottery, Thomas G. Scott, the Coombs-Simpson Memorial Fellowship, the Bob and Phyllis Mace Professorship at Oregon State University Department of Fisheries and Wildlife.

Author information

Authors and Affiliations

Authors

Contributions

All authors contributed to the study conception, design, and material preparation. Data collection were performed by Ghislain Rompré and W. Douglas Robinson. Analyses were performed by Jenna R. Curtis. The first draft of the manuscript was written by Jenna R. Curtis and all authors commented on previous versions of the manuscript. All authors read and approved the final manuscript.

Corresponding author

Correspondence to Jenna R. Curtis.

Ethics declarations

Conflict of interest

The authors have no relevant financial or non-financial interests to disclose.

Ethical approval

Not applicable.

Consent to participate

Not applicable.

Consent for publication

Not applicable.

Additional information

Publisher’s Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Below is the link to the electronic supplementary material.

Supplementary material 1 (DOCX 96.6 kb)

Supplementary material 2 (DOCX 255.9 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Curtis, J.R., Robinson, W.D., Rompré, G. et al. Urbanization is associated with unique community simplification among birds in a neotropical landscape. Landsc Ecol 37, 209–231 (2022). https://doi.org/10.1007/s10980-021-01344-1

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10980-021-01344-1

Keywords

Navigation