Skip to main content

Advertisement

Log in

Bathymetry, water optical properties, and benthic classification of coral reefs using hyperspectral remote sensing imagery

  • Report
  • Published:
Coral Reefs Aims and scope Submit manuscript

Abstract

The complexity and heterogeneity of shallow coastal waters over small spatial scales provides a challenging environment for mapping and monitoring benthic habitats using remote sensing imagery. Additionally, changes in coral reef community structure are occurring on unprecedented temporal scales that require large-scale synoptic coverage and monitoring of coral reefs. A variety of sensors and analyses have been employed for monitoring coral reefs: this study applied a spectrum-matching and look-up-table methodology to the analysis of hyperspectral imagery of a shallow coral reef in the Bahamas. In unconstrained retrievals the retrieved bathymetry was on average within 5% of that measured acoustically, and 92% of pixels had retrieved depths within 25% of the acoustic depth. Retrieved absorption coefficients had less than 20% errors observed at blue wavelengths. The reef scale benthic classification derived by analysis of the imagery was consistent with the percent cover of specific coral reef habitat classes obtained by conventional line transects over the reef, and the inversions were robust as the results were similar when the benthic classification retrieval was constrained by measurements of bathymetry or water column optical properties. These results support the use of calibrated hyperspectral imagery for the rapid determination of bathymetry, water optical properties, and the classification of important habitat classes common to coral reefs.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

References

  • Andréfouët S, Roux L (1998) Characterization of ecotones using membership degrees computed with a fuzzy classifier. Int J Remote Sens 19:3205–3211

    Article  Google Scholar 

  • Andréfouët S, Roux L, Chancerelle Y, Bonneville A (2000) A fuzzy-possibilistic scheme of study for objects with indeterminate boundaries: applications to French Polynesian reefscapes. IEEE Trans Geosci Remote Sens 38:257–270

    Article  Google Scholar 

  • Andréfouët S, Kramer P, Torres-Pulliza D, Joyce KD, Hochberg EJ, Garza-Pérez R, Mumby PJ, Riegl B, Yamano H, White WH, Zubia M, Brock JC, Phinn SR, Naseer A, Hatcher BG, Muller-Karger FE (2003) Multi-site evaluation of IKONOS data for classification of tropical coral reef environments. Remote Sens Environ 88:128–143

    Article  Google Scholar 

  • Boss E, Zaneveld JRV (2003) The effect of bottom substrate on inherent optical properties: evidence of biogeochemical processes. Limnol Oceanogr 48:346–354

    Article  Google Scholar 

  • Davis CO, Kappus M, Bowles J, Fisher J, Antoniades J, Carney M (1999) Calibration, characterization and first results with the ocean PHILLS hyperspectral imager. Proc SPIE-Int Soc Opt Eng 3753:160–168

    Google Scholar 

  • Gao B-C, Montes MJ, Ahmad Z, Davis CO (2000) Atmospheric correction algorithm for hyperspectral remote sensing of ocean color from space. Appl Opt 39:887–896

    Article  PubMed  CAS  Google Scholar 

  • Green EP, Mumby PJ, Edwards AJ, Clark CD (2000) Field survey: building the link between image and reality. In: Edwards AJ (ed) Remote sensing handbook for tropical coastal management. UNESCO Publishing, Paris, pp 57–65

    Google Scholar 

  • Hedley JD, Mumby PJ (2002) Biological and remote sensing perspectives of pigmentation in coral reef organisms. Adv Mar Biol 43:276–317

    Google Scholar 

  • Hedley JD, Mumby PJ (2003) A remote sensing method for resolving depth and subpixel composition of aquatic benthos. Limnol Oceanogr 48:480–488

    Article  Google Scholar 

  • Hedley JD, Mumby PJ, Joyce KE, Phinn SR (2004) Spectral unmixing of coral reef benthos under ideal conditions. Coral Reefs 23:60–73

    Article  Google Scholar 

  • Hochberg EJ, Atkinson MJ (2000) Spectral discrimination of coral reef benthic communities. Coral Reefs 19:164–171

    Article  Google Scholar 

  • Hochberg EJ, Atkinson MJ (2003) Capabilities of remote sensors to classify coral, algae, and sand as pure and mixed spectra. Remote Sens Environ 85:174–189

    Article  Google Scholar 

  • Hochberg EJ, Atkinson MJ, Andréfouët S (2003) Spectral reflectance of coral reef bottom-types worldwide and implications for coral reef remote sensing. Remote Sens Environ 85:159–173

    Article  Google Scholar 

  • Hochberg EJ, Atkinson MJ, Apprill A, Andréfouët S (2004) Spectral reflectance of coral. Coral Reefs 23:84–95

    Article  Google Scholar 

  • Hoegh-Guldberg O (1999) Climate change, coral bleaching and the future of the world’s coral reefs. Mar Freshw Res 50:839–866

    Article  Google Scholar 

  • Holden H, LeDrew E (1999) Hyperspectral identification of coral reef features. Int J Remote Sens 20:2545–2563

    Article  Google Scholar 

  • Isoun E, Fletcher C, Frazer N, Gradie J (2003) Multi-spectral mapping of reef bathymetry and coral cover; Kailua Bay, Hawaii. Coral Reefs 22:68–82

    Google Scholar 

  • Karpouzli E, Malthus TJ, Place CJ (2004) Hyperspectral discrimination of coral reef benthic communities in the western Caribbean. Coral Reefs 23:141–151

    Article  Google Scholar 

  • Lesser MP (2004) Experimental biology of coral reef ecosystems. J Exp Mar Biol Ecol 300:217–252

    Article  Google Scholar 

  • Louchard EM, Reid RP, Stephens FC, Davis CO, Leathers RA, Downes TV (2003) Optical remote sensing of benthic habitats and bathymetry in coastal environments at Lee Stocking Island, Bahamas: a comparative spectral classification approach. Limnol Oceanogr 48:511–521

    Article  Google Scholar 

  • Lyzenga DR (1981) Remote sensing of bottom reflectance and water attenuation parameters in shallow water using aircraft and Landsat data. Int J Remote Sens 2:71–82

    Article  Google Scholar 

  • Maritorena S, Morel A, Gentili B (1994) Diffuse reflectance of oceanic shallow waters: influence of water depth and bottom albedo. Limnol Oceanogr 39:1689–1703

    Article  Google Scholar 

  • Mazel CH (1997) Diver operated instrument for in situ measurement of spectral fluorescence and reflectance of benthic marine organisms and substrates. Opt Eng 36:2612–2617

    Article  Google Scholar 

  • Mobley CD (1994) Light and water: radiative transfer in natural waters. Academic, San Diego

    Google Scholar 

  • Mobley CD, Stramski D, Bissett WP, Boss E (2004) Optical modeling of ocean water: is the case 1—case 2 classification still useful? Oceanography 17:60–67

    Google Scholar 

  • Mobley CD, Sundman LK, Davis CO, Downes TV, Leathers RA, Montes MJ, Bowles JH, Bissett WP, Kohler DDR, Reid RP, Louchard EM, Gleason A (2005) Interpretation of hyperspectral remote-sensing imagery via spectrum matching and look-up tables. Appl Opt 44:3576–3592

    Article  PubMed  Google Scholar 

  • Montes MJ, Gao B-C, Davis CO (2001) A new algorithm for atmospheric correction of hyperspectral remote sensing data. Proc SPIE-Int Soc Opt Eng SPIE 4383:23–30

    Google Scholar 

  • Moore TS, Campbell JW, Feng H (2001) A fuzzy logic classification scheme for selecting and blending satellite ocean color algorithms. IEEE Trans Geosci Remote Sens 39:1764–1776

    Article  Google Scholar 

  • Mumby PJ, Green EP, Edwards AJ, Clark CD (1997) Coral reef habitat-mapping: how much detail can remote sensing provide? Mar Biol 130:193–202

    Article  Google Scholar 

  • Mumby PJ, Green EP, Clark CD, Edwards AJ (1998) Digital analysis of multispectral airborne imagery of coral reefs. Coral Reefs 17:59–69

    Article  Google Scholar 

  • Mumby PJ, Skirving W, Strong AE, Hardy JT, LeDrew EF, Hochberg EJ, Stumpf RP, David LT (2004a) Remote sensing of coral reefs and their physical environment. Mar Pollut Bull 48:219–228

    Article  PubMed  CAS  Google Scholar 

  • Mumby PJ, Hedley JD, Chisholm JRM, Clark CD, Ripley H, Jaubert J (2004b) The cover of living and dead corals from airborne remote sensing. Coral Reefs 23:171–183

    Article  Google Scholar 

  • Purkis SJ (2005) A “reef-up” approach to classifying coral habitats from IKONOS imagery. IEEE Trans Geosci Remote Sens 43:1375–1390

    Article  Google Scholar 

Download references

Acknowledgments

This research was supported by grants from the Office of Naval Research-Environmental Optics Program as part of the Coastal Benthic Optical Properties (CoBOP) program to MPL and CDM, who also received additional ONR support for the development of the LUT methodology, and was also made possible with funding to MPL provided by the Coral Reef Targeted Research (CRTR) Program. The CRTR Program is a partnership between the Global Environmental Facility, the World Bank, the University of Queensland (Australia), the United States National Oceanic and Atmospheric Administration (NOAA), and approximately 40 research institutes and other third parties around the world. We thank Curt Davis, Robert Leathers, Valerie Downs, Dave Phinney, Emmanuel Boss, Ron Zaneveld, Charles Mazel, and the staff of the NOAA Caribbean Marine Research Center at Lee Stocking Island, Bahamas for their help and assistance. This research conforms to the applicable laws of both the United States and the Bahamas.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to M. P. Lesser.

Additional information

Communicated by Ecology Editor P. J. Mumby.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Lesser, M.P., Mobley, C.D. Bathymetry, water optical properties, and benthic classification of coral reefs using hyperspectral remote sensing imagery. Coral Reefs 26, 819–829 (2007). https://doi.org/10.1007/s00338-007-0271-5

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00338-007-0271-5

Keywords

Navigation