Abstract
In natural ecosystems, endophytes, which live in the inner tissues of healthy plants, exhibit complex interactions with their hosts. During a long coevolutionary process with their hosts, endophytes have developed many significant and novel characteristics. In order to maintain a stable symbiosis, endophytes secrete varieties of extracellular enzymes that contribute to colonization and growth. All these specific enzymes, under certain conditions, could be exploited. Nowadays, more and more complex chemical reactions are being replaced by moderate and pollution-free enzymatic reactions. Bacteria have been widely used in bioengineering, but endophytes, as a kind of organism, have not been fully developed. Therefore, great efforts to develop endophyte resources could bring us a variety of benefits, such as novel and effective bioactive compounds that cannot be synthesized by chemical reactions. It is noteworthy that, after long-term coexistence with hosts, endophytes can synthesize biologically active substances similar to the secondary metabolites produced by host plants. This could help us to accumulate many valuable drug compounds such as paclitaxel and camptothecin in a short time period. In addition, endophytes are widespread in plant roots; they can deeply affect soil chemical composition, micro-ecosystems, and physical structure over their life cycle. Besides that, endophytes play an important role in the degradation of plant litter and organic pollutants, which have an active effect on the improvement of soil fertility. Endophytes are a most promising microbial resource, waiting to be exploited.
Similar content being viewed by others
References
Agusta A, Maehara S, Ohashi K, Simanjuntak P, Shibuya H (2005) Stereoselective oxidation at C-4 of flavans by the endophytic fungus Diaporthe sp. isolated from a tea plant. Chem Pharm Bull 53:1565–1569
Aken VB, Yoon JM, Schnoor JL (2004) Biodegradation of nitro-substituted explosives 2, 4, 6-trinitrotoluene, hexahydro-1, 3, 5-trinitro-1, 3, 5-triazine, an octahydro-1, 3, 5, 7-tetranitro-1, 3, 5-tetrazocine by a phytosymbiotic Methylobacterium sp. associated with poplar tissues (Populus deltoides x nigra DN34). Appl Environ Microbiol 70:508–517
Aly AH, Edrada-Ebel R, Wray V, Muller WEG, Kozytaka S, Hentschel U, Proksch P, Ebel R (2008) Bioactive metabolites from the endophytic fungus Ampelomyces sp. isolated from the medicinal plant Urospermum picroides. Phytochemistry 69:1716–1725
Barac T, Taghavi S, Borremans B, Provoost A, Oeyen L, Coloaert JV, Vangronsveld J, van der Lelie D (2004) Engineered endophytic bacteria improve phytoremediation of water-soluble, volatile, organic pollutants. Nat Biotechnol 22:583–588
Barretti PB, de Souza RM, Pozza AAA, Pozza EA, de Carvalho JG, de Souza JT (2008) Increased nutritional efficiency of tomato plants inoculated with growth-promoting endophytic bacteria. Rev Bras Cienc Solo 32:1541–1548
Barros FAP, Rodrigues E (2005) Four spiroquinazoline alkaloids from Eupenicillium sp. isolated as an endophytic fungus from leaves of Murraya paniculata (Rutaceae). Biochem Syst Ecol 33:257–268
Bastos DZL, IdaC P, de Jesus DA, de Oliveira BH (2007) Biotransformation of betulinic and betulonic acids by fungi. Phytochemisty 68:834–839
Bischoff KM, Wicklow DT, Jordan DB, de Rezende ST, Liu SQ, Hughes SR, Rich JO (2009) Extracellular hemicellulolytic enzymes from the maize endophyte Acremonium zeae. Curr Microbiol 58:499–503
Borges KB, Borges WDS, Pupo MT, Bonato PS (2008) Stereoselective analysis of thioridazine-2-sulfoxide and thioridazine-5-sulfoxide: an investigation of rac-thioridazine biotransformation by some endophytic fungi. J Pharmaceut Biomed 46:945–952
Borges KB, Pupo MT, Bonato PS (2009a) Enantioselective analysis of propranolol and 4-hydroxypropranolol by CE with application to biotransformation studies employing endophytic fungi. Electrophoresis 30:3910–3917
Borges WS, Borges KB, Bonato PS, Said S, Pupo MT (2009b) Endophytic fungi: natural products, enzymes and biotransformation reactions. Curr Org Chem 13:1137–1163
Brady SF, Clardy J (2000) CR377, a new pentaketide antifungal agent isolated from an endophytic fungus. J Nat Prod 63:1447–1448
Chomcheon P, Wiyakrutta S, Sriubolmas N, Ngamrojanavanich N, Mahidol C, Ruchirawat S, Kittakoop P (2009) Metabolites from the endophytic mitosporic Dothideomycete sp. LRUB20. Phytochemistry 70:121–127
Clay K, Schardl C (2002) Evolutionary origins and ecological consequences of endophyte symbiosis with grasses. Am Nat 160:99–127
Costa LSR, Azevedo JL, Pereira JO, Carneiro ML, Labate CA (2000) Symptomless infection of banana and maize by endophytic fungi impairs photosynthetic efficiency. New Phytol 147:609–615
Dai CC, Tian LS, Zhao YT, Chen Y, Xie H (2010) Degradation of phenanthrene by the endophytic fungus Ceratobasidum stevensii found in Bischofia polycarpa. Biodegradation 21:244–255
Debbab A, Aly AH, Edrada-Ebel R, Wray V, Muller WEG, Totzke F, Zirrgielei U, Schachtelt C, Kubbutat MHG, Lin WH, Mosaddak M, Hakiki A, Proksch P, Ebel R (2009) Bioactive metabolites from the endophytic fungus Stemphylium globuliferum isolated from Mentha pulegium. J Nat Prod 72:626–631
Feng Y, Shen D, Song W (2006) Rice endophyte Pantoea agglomerans YS19 promotes host plant growth and affects allocations of host photosynthates. J Appl Microbiol 100:938–945
Forchetti G, Masciarelli O, Alemano S, Alvarez D, Abdala G (2007) Endophytic bacteria in sunflower (Helianthus annuus L.): isolation, characterization, and production of jasmonates and abscisic acid in culture medium. Appl Microbiol Biotechnol 76:1145–1152
Gangadevi V, Muthumary J (2008) Taxol, an anticancer drug produced by an endophytic fungus Bartalinia robillardoides Tassi, isolated from a medicinal plant, Aegle marmelos Correa ex Roxb. World J Microbiol Biotechnol 24:717–724
Ge HM, Yu ZG, Zhang J, Wu JH, Tan RX (2009) Bioactive alkaloids from endophytic Aspergillus fumigatus. J Nat Prod 72:753–755
Hamada H, Kondo Y, Ishihara K, Nakajima N, Hamada H, Kurihara R, Hirata T (2003) Stereoselective biotransformation of limonene and limonene oxide by cyanobacterium, Synechococcus sp. PCC 7942. J Biosci Bioeng 96:481–584
Jordaan A, Taylor JE, Rossenkhan R (2006) Occurrence and possible role of endophytic fungi associated with seed pods of Colophospermum mopane (Fabaceae) in Botswana. S Afr J Bot 72:245–255
Jurc D, Bojovic S, Jurc M (1999) Influence of endogenous terpenes on growth of three endophytic fungi from the needles of Pinus nigra Arnold. Phyton Ann Rei Bot 39:225–229
Koide K, Osono T, Takeda H (2005) Colonization and lignin decomposition of Camellia japonica leaf litter by endophytic fungi. Mycoscience 46:280–286
Kudanga T, Mwenje E (2005) Extracellular cellulase production by tropical isolates of Aureobasidium pullulans. Can J Microbiol 51:773–776
Kusari S, Zuhlke S, Spiteller M (2009) An endophytic fungus from Camptotheca acuminata that produces camptothecin and analogues. J Nat Prod 72:2–7
Lata H, Li XC, Silva B, Moraes RM, Halda-Alija L (2006) Identification of IAA-producing endophytic bacteria from micropropagated Echinacea plants using 16 S rRNA sequencing. Plant Cell Tissue Organ Cult 85:353–359
Li JY, Strobel G, Harper J, Lobkovsky E, Clardy J (2000) Cryptocin, a potent tetramic acid antimycotic from the endophytic fungus Cryptosporiopsis cf. quercina. Org Lett 2:767–770
Liu L, Liu SC, Chen XL, Guo LD, Che YS (2009) Pestalofones A-E, bioactive cyclohexanone derivatives from the plant endophytic fungus Pestalotiopsis fici. Bioorg Med Chem 17:606–613
Lumyong S, Lumyong P, McKenzie EHC, Hyde KD (2002) Enzymatic activity of endophytic fungi of six native seedling species from Doi Suthep-Pui National Park, Thailand. Can J Microbiol 48:1109–1112
Marco-Urrea E, Gabarrell X, Caminal G (2008) Aerobic degradation by white-rot fungi of trichloroethylene (TCE) and mixtures of TCE and perchloroethylene (PCE). J Chem Technol Biotechnol 83:1190–1196
Mucciarelli M, Camusso W, Maffei M, Panicco P, Bicchi C (2007) Volatile terpenoids of endophyte-free and infected peppermint (Mentha piperita L.): chemical partitioning of a symbiosis. Microb Ecol 54:685–696
Muller M, Valjakka R, Suooko A, Hantula J (2001) Diversity of endophytic fungi of single Norway spruce needles and their role as pioneer decomposers. Mol Ecol 10:1801–1810
Newman LA, Reynolds CM (2005) Bacteria and phytoremediation: new uses for endophytic bacteria in plants. Trends Biotechnol 23:6–8
Nikiforova SV, Pozdnyakova NN, Turkovskaya OV (2009) Emulsifying agent production during PAHs degradation by the white rot fungus Pleurotus Ostreatus D1. Curr Microbiol 58:554–558
Oses R, Valenzuela S, Freer J, Baeza J, Rodriguez J (2006) Evaluation of fungal endophytes for lignocellulolytic enzyme production and wood biodegradation. Int Biodeterior Biodegrad 57:129–135
Osono T, Takeda H (2001) Effects of organic chemical quality and mineral nitrogen addition on lignin and holocellulose decomposition of beech leaf litter by Xylaria sp. Eur J Soil Biol 37:17–23
Osono T, Takeda H (2002) Comparison of litter decomposing ability among diverse fungi in a cool temperate deciduous forest in Japan. Mycologia 94:421–427
Pan JJ, Clay K (2004) Epichloe glyceriae infection affects carbon translocation in the clonal grass Glyceria striata. New Phytol 164:467–475
Peters S, Dammeyer B, Schulz B (1998) Endophyte-host interactions. I. Plant defense reactions to endophytic and pathogenic fungi. Symbiosis 25:193–211
Phillips A, Germida J, Farrell R, Greer C (2008) Hydrocarbon degradation potential and activity of endophytic bacteria associated with prairie plants. Soil Biol Biochem 40:3054–3064
Pongcharoen W, Rukachaisirikul V, Phongpaichit S, Rungjindamai N, Sakayaroj J (2006) Pimarane diterpene and cytochalasin derivatives from the endophytic fungus Eutypella scoparia PSU-D44. J Nat Prod 69:856–858
Puente ME, Li CY, Bashan Y (2009) Rock-degrading endophytic bacteria in cacti. Environ Exp Bot 66:389–401
Redman RS, Dunigan DD, Rodriguez RJ (2001) Fungal symbiosis from mutualism to parasitism: who controls the outcome, host or invader? New Phytol 151:705–716
Saikkonen K, Faeth SH, Helander M, Sullivan TJ (1998) Fungal endophytes: a continuum of interactions with host plant. Annu Rev Ecol Evol Syst 29:319–343
Saikkonen K, Wali P, Helander M, Faeth SH (2004) Evolution of endophyte-plant symbioses. Trends Plant Sci 9:275–280
Saunders M, Kohn LM (2009) Evidence for alteration of fungal endophyte community assembly by host defense compounds. New Phytol 182:229–238
Schulz B, Guske S, Dammann U, Boyle C (1998) Endophyte-host interactions. II. Defining symbiosis of the endophyte-host interaction. Symbiosis 25:213–227
Schulz B, Boyle C, Draeger S, Rommert AK, Kronh K (2002) Endophytic fungi: a source of novel biologically active secondary metabolites. Mycol Res 106:996–1004
Shi Y, Dai CC, Wu YC, Yuan ZL (2004) Study on the degradation of wheat straw by endophytic fungi. Acta Sci Circumst 24:145–149 (In Chinese)
Strobel G, Daisy B (2003) Bioprospecting for microbial endophytes and their natural products. Microbiol Mol Biol Rev 67:491–502
Tan RX, Zou WX (2001) Endophytes: a rich source of functional metabolites. Nat Prod Rep 18:448–459
Tansuwan S, Pornpakakul S, Roengsumran S, Petsom A, Muangsin N, Sihanonta P, Chaichit N (2007) Antimalarial benzoquinones from an endophytic fungus, Xylaria sp. J Nat Prod 70:1620–1623
Tomita F (2003) Endophytes in Southeast Asia and Japan: their taxonomic diversity and potential applications. Fungal Divers 14:187–204
Urairuj C, Khanongnuch C, Lumyong S (2003) Ligninolytic enzymes from tropical endophytic Xylariaceae. Fungal Divers 13:209–219
Verza M, Arakawa NS, Lope NP, Kato MJ, Pupo MT, Said S, Carvalho I (2009) Biotransformation of a tetrahydrofuran lignan by the endophytic fungus Phomopsis Sp. J Braz Chem Soc 20:195–200
Wang JW, Wu JH, Huang WY, Tan RX (2006) Laccase production by Monotospora sp., an endophytic fungus in Cynodon dactylon. Bioresour Technol 97:786–789
Wei GH, Yang XY, Zhang JW, Gao JM, Ma YQ, Fu YY, Wang P (2007) Rhizobialide: a new stearolactone produced by Mesorhizobium sp. CCNWGX022, a rhizobial endophyte from Glycyrrhiza uralensis. Chem Biodivers 4:893–898
Wilson D (1995) Endophyte: the evolution of a term, and clarification of its use and definition. Oikos 73:274–276
Xiao X, Luo SL, Zeng GM, Wei WZ, Wan Y, Chen L, HJ G, Cao Z, Yang LX, Chen JL, Xi Q (2010) Biosorption of cadmium by endophytic fungus (EF) Microsphaeropsis sp. LSE10 isolated from cadmium hyperaccumulator Solanum nigrum L. Bioresour Technol 101:1668–1674
Xin G, Zhang GY, Kang JW, Staley JT, Doty SL (2009) A diazotrophic, indole-3-acetic acid-producing endophyte from wild cottonwood. Biol Fertil Soils 45:669–674
Xu LL, Han T, Wu JZ, Zhang QY, Zhang H, Huang BK, Rahman K, Qin LP (2009) Comparative research of chemical constituents, antifungal and anttitumor properties of ether extracts of Panax ginseng and its endophytic fungus. Phytomedicine 16:609–616
Yin H, Zhao Q, Sun FM, An T (2009) Gentiopicrin-producing endophytic fungus isolated from Gentiana macrophylla. Phytomedicine 16:793–797
You F, Han T, Wu JZ, Huang BK, Qin LP (2009) Antifungal secondary metabolites from endophytic Verticillium sp. Biochem Syst Ecol 37:162–165
Zikmundova M, Drandarov K, Bigler L, Hesse M, Werner C (2002) Biotransformation of 2-Benzoxazolinone and 2-Hydroxy-1, 4-Benzoxazin-3-one by endophytic fungi isolated from Aphelandra tetragona. Appl Environ Microbiol 10:4863–4870
Acknowledgment
The authors are grateful to the National Natural Science Foundation of China (NSFC, NO. 30970523, 30770073, 30500066) for its financial support. The authors express their great thanks to anonymous reviewers and editorial staff for their time and attention.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Wang, Y., Dai, CC. Endophytes: a potential resource for biosynthesis, biotransformation, and biodegradation. Ann Microbiol 61, 207–215 (2011). https://doi.org/10.1007/s13213-010-0120-6
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s13213-010-0120-6