Microalgal biomarkers: A review of recent research developments
Introduction
Over recent years, many new compounds have been identified in sediments deposited in marine and lacustrine environments. Despite the fact that our knowledge of algal lipids is still far from comprehensive, microalgal sources have now been identified for many of the lipids that are widely distributed in Recent sediments (e.g. Boon et al., 1979; Albaiges et al., 1984; Volkman, 1986; ten Haven et al., 1987; Volkman et al., 1992, Volkman et al., 1994; Conte et al., 1994). Some of these compounds are only slowly degraded or are transformed to more stable chemical structures (e.g. Gagosian et al., 1980; Kohnen et al., 1990), and thus they can be used as biomarkers for assessing the sources of the organic matter in sediments. However, it is also apparent that some compounds are more widely distributed in the biosphere than previously thought and thus their value as specific fossil biomarkers has diminished. Sterols provide a good example of this; some sterols are found only in a few classes while others are now known to be quite widely distributed (Table 1; Volkman, 1986; Patterson, 1991). The identification of several distinctive types of aliphatic biopolymer in some classes of microalgae (Gelin et al., 1998; de Leeuw and Largeau, 1993) provides a new type of biomarker and highlights the value of studies of the bound lipids and macromolecular organic matter in organisms and sediments. This paper provides a review of some of these new findings on microalgal lipid compositions and their relevance to organic geochemical studies.
Section snippets
Microalgal cultures
Microalgae were obtained from the CSIRO culture collection of living microalgae (Jeffrey, 1980). Rhizosolenia setigera (CS-389/1) was isolated from water of the Huon Estuary, Tasmania by Dr A. Jackson. The freshwater eustigmatophyte Vischeria punctata CS-142 was originally obtained from the University of Texas culture collection in 1982 as UTEX 153. The dinoflagellate Scrippsiella sp. CS-295/c was isolated from ship ballast water.
Cultures were grown under a 12:12 h light–dark cycle, at 18.5°C
Results and discussion
All species of microalgae contain sterols and fatty acids, and most contain small amounts of hydrocarbons. However, some species have been shown to contain unusual lipids (Table 2), and some of these may proved to be useful as biomarkers in organic geochemical studies. The following discussion examines many of these lipid classes in more detail, with an emphasis on identifying characteristics that might be restricted to a particular class of microalgae.
Conclusions
Studies of contemporary marine sediments and of living microalgae continue to demonstrate the presence of novel lipids. Many of these have quite long alkyl chains, and it is becoming clear that the biosynthetic pathways in microalgae are far more diverse than had been suspected from earlier studies. Some lipid classes such as alkyl diols, alkenones, HBI alkenes, and botryococcenes appear to have a restricted occurrence in microalgae (Table 2) and thus are useful biomarkers for identifying
Acknowledgements
We thank Dr Anne Jackson for some algal cultures and Jeannie-Marie LeRoi for assistance with algal culturing. Dr Andrew Revill, Dr Jürgen Rullkötter and Dr Ken Peters provided helpful comments which improved the manuscript.
References (130)
- et al.
Biosynthesis of heterocyst glycolipids of Anabaena cylindrica
Phytochemistry
(1977) - et al.
Bacterial degradation of green microalgae – incubation of Chlorella emersonii and Chlorella vulgaris with Pseudomonas oleovorans and Flavobacterium aquatile
Organic Geochemistry
(1996) - et al.
Extractable and bound neutral lipids in some lacustrine sediments
Organic Geochemistry
(1984) - et al.
Lipid composition during growth of motile and coccolith forms of Emiliania huxleyi
Phytochemistry
(1996) - et al.
Octadecapentaenoic acid in a raphidophyte alga, Heterosigma akashiwo
Phytochemistry
(1997) - et al.
Structural characterisation of widespread polyunsaturated isoprenoid biomarkers: A C25 triene, tetraene and pentaene from the diatom Haslea ostrearia Simonsen
Tetrahedron Letters
(1996) - et al.
Reassessment of lipid composition of the diatom, Skeletonema costatum
Phytochemistry
(1995) - et al.
Generation of biogenic hydrocarbons during a spring bloom in Newfoundland coastal (NW Atlantic) waters
Organic Geochemistry
(1997) - et al.
Biosynthesis of docosahexaenoic acid in trout hepatocytes proceeds via 24-carbon intermediates
Comparative Biochemistry and Physiology
(1997) - et al.
Cutin acids from bryophytes: An ω-1 hydroxy alkanoic acid in two liverwort species
Phytochemistry
(1976)
The use of hydroxyacids as geochemical indicators
Geochimica et Cosmochimica Acta
The stereochemistry of 2- and 3-hydroxy fatty acids in a Recent lacustrine sediment
Geochimica et Cosmochimica Acta
Lipids of aquatic organisms as potential contributions to lacustrine sediments – II
Organic Geochemistry
Paraffinic hydrocarbons in the sulfate-reducing bacterium Desulfovibrio desulfuricans
Chemical Geology
Formation of ultralaminae in marine kerogens via selective preservation of thin resistant outer walls of microalgae
Organic Geochemistry
Biochemical composition of microalgae from the green algal classes Chlorophyceae and Prasinophyceae 2. Lipid classes and fatty acids
Journal of Experimental Marine Biology and Ecology
Gas chromatographic-mass spectrometric studies of long-chain hydroxy acids-II. The hydroxy acids and fatty acids of a 5000-year-old lacustrine sediment
Tetrahedron
Geochemistry of hydroxy acids in sediments – I. Some freshwater and brackish water lakes in Japan
Organic Geochemistry
Chain elongation, 2-hydroxylation, and decarboxylation of long chain fatty acids by yeast
Journal of Biological Chemistry
Fatty acid metabolism in bacteria
Progress in Lipid Research
Novel, resistant microalgal polyethers: An important sink of organic carbon in the marine environments?
Geochimica et Cosmochimica Acta
Mid-chain hydroxy long-chain fatty acids in microalgae from the genus Nannochloropsis
Phytochemistry
Hydrocarbons of geochemical significance in microscopic algae
Phytochemistry
Identification of (24S)-24-methylcholesta-5,22-dien-3β-ol as the major sterol of a marine Cryptophyte and a marine Prymnesiophyte
Phytochemistry
Phospholipid, ester-linked fatty acid profiles as reproducible assays for changes in prokaryotic community structure of estuarine sediments
FEMS Microbial Ecology
Lipid composition of the marine dinoflagellate Scrippsiella trochoidea
Phytochemistry
A novel C35 highly branched isoprenoid polyene in Recent Indian Ocean sediments
Organic Geochemistry
Isotope and molecular evidence for the diverse origins of carboxylic acids in leaf fossils and sediments from the Miocene Lake Clarkia deposit, Idah, U.S.A.
Organic Geochemistry
Hydrocarbons in spinach: Two distinctive carbon ranges of aliphatic hydrocarbons
Phytochemistry
The mode of occurrence of lipids in a Namibian Shelf diatomaceous ooze with emphasis on the β-hydroxy fatty acids
Organic Geochemistry
Origin and diagenetic transformations of C25 and C30 highly branched isoprenoid sulphur compounds: Further evidence for the formation of organically bound sulphur during early diagenesis
Geochimica et Cosmochimica Acta
Sterols of the cultured dinoflagellate Pyrocystis lunula
Steroids
Distribution of 21:6 hydrocarbon and its relationship to 22:6 fatty acid in algae
Phytochemistry
Using faecal sterols from humans and animals to distinguish faecal pollution in receiving waters
Water Research
The occurrence and identification of C30, C31 and C32 alkan-1,15-diols and alkan-15-one-1-ols in Unit I and Unit II Black Sea sediments
Geochimica et Cosmochimica Acta
Free, esterified and residual bound sterols in Black Sea Unit 1 sediments
Geochimica et Cosmochimica Acta
The absence of long-chain alkyl diols and alkyl keto-1-ols in cultures of the cyanobacterium Aphanizomenon flos-aquae
Organic Geochemistry
Long-chain alkenones in Qinghai Lake sediments
Geochimica et Cosmochimica Acta
Distribution of chlorosulpholipids in algae
Phytochemistry
Sterols, sterol esters and fatty acids of Botrydium granulatum, Tribonema aequale and Monodus subterraneus
Phytochemistry
Lipids of the Antarctic sea ice diatom Nitzschia cylindrus
Phytochemistry
5β-isomers of stanols and stanones as potential markers of sedimentary organic quality and depositional paleoenvironments
Geochimica et Cosmochimica Acta
The occurrence of stanols in various living organisms and the behaviour of sterols in contemporary sediments
Geochimica et Cosmochimica Acta
Novel C26 highly branched isoprenoid thiophenes and alkane from the Menilite Formation, Outer Carpathians, SE Poland
Organic Geochemistry
Identification of very long polyenoic acids as picolinyl esters by Ag+ ion-exchange high-performance liquid chromatography, reversed-phase high-performance liquid chromatography and gas chromatography-mass spectrometry
Journal of Chromatography
Identification of wax esters of the fresh-water green alga Chlorella kessleri by gas chromatography-mass spectrometry
Journal of Chromatography
Lipids of four species of freshwater dinoflagellates
Phytochemistry
Isolation of two new C30 sterols, 24(E)-n-propylidenecholesterol and 24-n-propylcholesterol, from a cultured Chrysophyte
Steroids
The widespread occurrence of highly branched acyclic C20, C25 and C30 hydrocarbons in Recent sediments and biota – a review
Marine Environmental Research
Occurrence of 2,6,10-trimethyl-7-(3-methylbutyl)-dodecane and related hydrocarbons in the green alga Enteromorpha prolifera and sediments
Organic Geochemistry
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