Review
Bioremediation of high molecular weight polycyclic aromatic hydrocarbons: a review of the microbial degradation of benzo[a]pyrene

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Abstract

Over the past 30 years, research on the microbial degradation of polycyclic aromatic hydrocarbons (PAHs) has resulted in the isolation of numerous genera of bacteria, fungi and algae capable of degrading low molecular weight PAHs (compounds containing three or less fused benzene rings). High molecular weight PAHs (compounds containing four or more fused benzene rings) are generally recalcitrant to microbial attack, although some fungi and algae are capable of transforming these compounds. Until recently, only a few genera of bacteria have been isolated with the ability to utilise four-ring PAHs as sole carbon and energy sources while cometabolism of five-ring compounds has been reported. The focuss of this review is on the high molecular weight PAH benzo[a]pyrene (BaP). There is concern about the presence of BaP in the environment because of its carcinogenicity, teratogenicity and toxicity. BaP has been observed to accumulate in marine organisms and plants which could indirectly cause human exposure through food consumption. This review provides an outline of the occurrence of BaP in the environment and the ability of bacteria, fungi and algae to degrade the compound, including pathways for BaP degradation by these organisms. In addition, approaches for improving microbial degradation of BaP are discussed.

Introduction

Polycyclic aromatic hydrocarbons (PAHs) are one class of toxic environmental pollutants that have accumulated in the environment due to a variety of anthropogenic activities. Since the 1970s, research on the biological degradation of PAHs has demonstrated that bacteria, fungi and algae possess catabolic abilities that may be utilised for the remediation of PAH-contaminated soil and water. Presently, bioremediation has been shown to be effective in remediating soils contaminated with low molecular weight PAHs (Mueller et al., 1991a, Kastner and Mahro, 1996, Banerjee et al., 1995); however, the high molecular weight PAHs are generally recalcitrant to microbial attack (Park et al., 1990, Erickson et al., 1993, Cerniglia, 1992). Although the lack of microbial activity towards high molecular weight PAHs may be attributed to site specific environmental factors, such as bioavailability of the contaminant, nutrients, redox potential, etc., the limiting factor may be the scarcity of micro-organisms capable of degrading the more highly condensed compounds. For bioremediation to be an effective tool for the clean up of PAH-contaminated soils, a greater understanding of the processes involved, and those that limit the degradation of high molecular weight PAHs, is required.

One such high molecular weight PAH is benzo[a]pyrene (BaP), a five-ring compound. BaP has been classified by the US Environmental Protection Agency (USEPA) as a priority pollutant: a compound selected on the basis of its known or suspected carcinogenicity, teratogenicity or acute toxicity. Multiple animal studies in many species have demonstrated the carcinogenicity of BaP following administration by numerous routes. In addition, BaP has been shown to cause genotoxic effects in a broad range of prokaryotic and mammalian cell assays, and as such, its occurrence in the environment is of great concern. The level of BaP in the environment forms the basis for the development of environmental assessment and cleanup regulations throughout the world. Although there is a great diversity of organisms capable of degrading low molecular weight PAH, such as naphthalene, acenaphthene and phenanthrene, relatively few genera have been observed to degrade the high molecular weight PAHs, such as BaP. The subject of this review is the microbial degradation of BaP, factors limiting the compounds degradation and options for its remediation.

Section snippets

Physical properties of PAHs and BaP

The term PAH generally refers to hydrocarbons containing two or more fused benzene rings in linear, angular or clustered arrangements (Sims and Overcash, 1983). PAHs are hydrophobic compounds and their persistence in the environment is chiefly due to their low water solubility (Cerniglia, 1992). Generally, PAH solubility decreases and hydrophobicity increases with an increase in number of fused benzene rings. In addition, volatility decreases with an increasing number of fused rings (Wilson and

Production of PAHs

The major source of PAHs is from the combustion of organic material (Cerniglia and Yang, 1984, Guerin and Jones, 1988a). PAHs are formed naturally during thermal geologic production and during burning of vegetation in forest and bush fires (Blumer, 1976, Bjorseth et al., 1979a). PAHs and their alkyl homologs may also be derived from biogenic precursors during early diagenesis (Wakeham et al., 1980b, Laflamme and Hites, 1978, Laflamme and Hites, 1979). However, anthropogenic sources,

Occurrence of PAHs in the environment

The release of PAHs into the environment is widespread since these compounds are ubiquitous products of incomplete combustion. PAHs have been detected in a wide variety of environmental samples, including air (Freeman and Cattell, 1990, Sexton et al., 1985, Greenberg et al., 1985), soil (Jones et al., 1989a, Jones et al., 1989b, Jones et al., 1989c, Wilson and Jones, 1993), sediments (Youngblood and Blumer, 1975, Laflamme and Hites, 1978, Shiaris and Jambard-Sweet, 1986), water (Cerniglia and

PAH toxicity

Many PAHs are carcinogenic and they are, therefore, of significant concern as environmental contaminants (Sims and Overcash, 1983). Numerous studies have indicated that one-, two- and three-ring compounds are acutely toxic (Sims and Overcash, 1983), while higher molecular weight PAHs are considered to be genotoxic (Lijinsky, 1991, Mersch-Sundermann et al., 1992, Nylund et al., 1992, Phillips, 1983).

BaP is one of the most potent carcinogenic PAHs, and as such, is the most studied compound of the

General aspects of PAH degradation

The persistence of PAHs in the environment depends on the physical and chemical characteristics of the PAH. PAHs are degraded by photo-oxidation and chemical oxidation (Shiaris, 1989), but biological transformation is probably the prevailing route of PAH loss (Mueller et al., 1990b). The recalcitrance of PAHs to microbial degradation increases directly with the molecular weight and the octanol:water partition coefficient (log Kow) (Cerniglia, 1992). The microbial metabolism of PAHs containing

Biodegradability of PAHs

Numerous genera of micro-organisms have been observed to oxidise PAHs (Table 7). While there is a great diversity of organisms capable of degrading the low molecular weight PAH, such as naphthalene, acenaphthene and phenanthrene, relatively few genera have been observed to degrade the high molecular weight PAHs, such as the BaP. Kastner et al. (1994) suggested that nocardioform bacteria (e.g. Rhodococcus, Nocardia, Mycobacterium and Gordona) may play a crucial role in the degradation of high

Bacteria

Little is known about the bacterial oxidation of BaP. To date, no bacteria have been isolated with the ability to utilise BaP as a growth substrate. However, liquid culture experiments have shown that bacteria can degrade BaP when grown on an alternative carbon source (Table 10). Ye et al. (1996) observed a decrease in BaP concentration during incubations with Sphingomonas paucimobilis strain EPA 505. A 5% decrease in BaP concentration after 168 h was observed in cultures inoculated with

Degradation of BaP in complex PAH mixtures

Although a number of bacteria, fungi and algae are able to degrade BaP for these organisms to be effective in PAH bioremediation, they must possess the ability to degrade BaP, as well as other PAH compounds present in complex PAH mixtures. A number of studies have indicated that consortia and pure cultures possess the ability to degrade BaP when it is present as part of a PAH mixture. Grosser et al. (1991) investigated the mineralisation of [7-14C] BaP added to soil from coal gasification

Limiting factors for BaP degradation

A number of physical, chemical, biological or environmental factors may influence the rate and extent of BaP degradation. BaP degradation may not occur due to the lack of essential nutrients (such as nitrogen, phosphorus, potassium) or growth substrates, suboptimum temperatures, oxygen availability or pH. BaP may not be accessible due to its low water solubility or it may be at a concentration where it is toxic to bacteria, fungi or algae. In addition, BaP may not be able to be transported into

Current approaches to improve BaP degradation

Due to the aforementioned limiting factors, bioremediation of BaP in contaminated soils, sediments and water may be limited or unsuccessful. A number of approaches may be applied to bioremediation to overcome these factors and to improve microbial BaP degradation.

Conclusions

Although bioremediation is generally regarded as an economical remediation option for the clean up of PAH-contaminated soil, the successful application of this technology is restricted by the limited capacity of micro-organisms to degrade high molecular weight PAHs. Many bacteria, fungi and algae have the ability to degrade a range of low molecular weight PAHs, such as naphthalene, fluorene and phenanthrene, however, their activity towards PAHs containing five or more fused benzene rings, such

Acknowledgements

This research was supported by CSIRO Land and Water, Remediation of Contaminated Environments Program, Adelaide, Australia.

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