Elsevier

Information Sciences

Volumes 340–341, 1 May 2016, Pages 250-261
Information Sciences

An improved method to construct basic probability assignment based on the confusion matrix for classification problem

https://doi.org/10.1016/j.ins.2016.01.033Get rights and content

Abstract

The determination of basic probability assignment (BPA) is a crucial issue in the application of Dempster–Shafer evidence theory. Classification is a process of determining the class label that a sample belongs to. In classification problem, the construction of BPA based on the confusion matrix has been studied. However, the existing methods do not make full use of the available information provided by the confusion matrix. In this paper, an improved method to construct the BPA is proposed based on the confusion matrix. The proposed method takes into account both the precision rate and the recall rate of each class. An illustrative case regarding the prediction of transmembrane protein topology is given to demonstrate the effectiveness of the proposed method.

Introduction

Dempster–Shafer evidence theory [9], [45], also called Dempster–Shafer theory, has been widely applied in many fields, such as information fusion [50], classification [5], [37], [38], and others [4], [10], [11], [12], [13], [16], [20], [25], [42], [49], [57], [68]. Tabassian et al. [51], [52] used Dempster–Shafer theory to handle data with imperfect labels in ensemble learning, and addressed the situation that the class memberships of the training data are subject to ambiguity. Deng [19] proposed a generalized evidence theory (GET) to address conflict management in an open world environment. Thanks to its flexibility, Dempster–Shafer theory has been combined with other theories like fuzzy set theory [8], [31], [69] and genetic algorithm [22], and many useful tools have been developed to handle various types of uncertainty, which further extends the application of the Dempster–Shafer theory. For instance, in [32], Kang et al. proposed an uncertain-graph structure, called evidential cognitive map (ECM), to represent causal reasoning by combining the cognitive maps and Dempster–Shafer theory. Recently, in the fields of evolutionary game theory [6], [7], [15], [58], [59], [60], [61], [62], [63], [64] and game theory [53], Dempster–Shafer evidence theory has also attracted some interests [17], [18], [35].

The determination of basic probability assignment (BPA) is one of the most important problems in evidential systems. The construction of BPA based on the confusion matrix is a practical and effective method [1], [2], [24], [40], [43], [54], [65]. In a previous related study, Xu et al. [65] presented an elegant method for the construction of BPA based on recognition rate, substitution rate, and rejection rate of the confusion matrix. However, Xu et al.’s method does not consider the difference of the classifier’s recognition ability for different classes. To overcome the shortcoming, Parikh et al. [40] proposed a modified method, which is more effective and has been successfully used in condition monitoring. The improvement proposed by Parhikh et al. is on the basis of the prior knowledge provided by the confusion matrix. Specifically, that method utilized the precision rate of each actual class according to the confusion matrix. However, the prior knowledge contained in the confusion matrix is not only the precision rate, but also the recall rate of each class which is another important aspect to reflect the classifier’s recognition ability for each class.

Based on this idea, an improved BPA construction method is proposed based on the confusion matrix in this paper. Section 2 introduces some basic concepts and related previous work. Section 3 presents the proposed method. Section 4 gives an illustrative case to demonstrate the effectiveness of the proposed method. Section 5 concludes the paper.

Section snippets

Basic concepts

The Dempster–Shafer evidence theory [9], [45], first proposed by Dempster and further developed by Shafer, is widely used to handle uncertain information. In this theory, basic probability assignment (BPA) is used to represent the uncertain information, and Dempster’s rule of combination is used to combine multiple BPAs.

In Dempster–Shafer theory, a problem domain denoted by a finite nonempty set Ω of mutually exclusive and exhaustive hypotheses is called the frame of discernment. Let 2Ω denote

Proposed method

Based on the abundant prior knowledge contained in the confusion matrix, an improved method to construct the BPA is proposed in this section. Generally, a confusion matrix contains the information about actual and predicted classifications given by a classification system. In order to evaluate the performance of such systems, the data in the matrix is usually used. Based on the data coming from the confusion matrix, some indices, for instances accuracy, sensitivity (also called recall),

Case study

In this section, the prediction of transmembrane protein topology is used to illustrate the our proposed method, partial results are from our previous study [14]. The topology of transmembrane proteins, i.e. the number and position of the transmembrane helixes and the in/out location of the N and C terminals of the protein sequence, is an important issue in the study of transmembrane proteins [21], [36]. For a protein sequence, if both the transmembrane helixes and location of the N and C

Conclusion

As frequently stressed in previous studies, the determination of BPA is one of the most key problem in the application of Dempster–Shafer evidence theory. And in an evidential multiple classifiers system, the construction of BPA has a great influence on the classification performance. In this paper, an improved BPA construction method is proposed based on the confusion matrix for classification problem. The proposed method makes full use of the available information contained in the confusion

Acknowledgments

The authors thank the anonymous reviewers for their valuable comments and suggestions to improve this paper. The work is partially supported by National High Technology Research and Development Program of China (863 Program) (Grant No. 2013AA013801), National Natural Science Foundation of China (Grant Nos. 61174022, 61573290), the open funding project of State Key Laboratory of Virtual Reality Technology and Systems, Beihang University (Grant No. BUAA-VR-14KF-02), Fundamental Research Funds for

References (69)

  • X. Deng et al.

    An evidential game theory framework in multi-criteria decision making process

    Appl. Math. Comput.

    (2014)
  • Y. Deng et al.

    Scoring hidden Markov models to discriminate β-barrel membrane proteins

    Comput. Biol. Chem.

    (2004)
  • L. Diaz-Mas et al.

    Shape from silhouette using Dempster-Shafer theory

    Patt. Recognit.

    (2010)
  • X.F. Fan et al.

    Fault diagnosis of machines based on D-S evidence theory. Part 2: application of the improved D-S evidence theory in gearbox fault diagnosis

    Pattern Recog. Lett.

    (2006)
  • M.C. Florea et al.

    Robust combination rules for evidence theory

    Inf. Fusion

    (2009)
  • B. Kang et al.

    Evidential cognitive maps

    Knowl.-Based Syst.

    (2012)
  • E. Lefèvre et al.

    How to preserve the conflict as an alarm in the combination of belief functions?

    Decis. Support Syst.

    (2013)
  • Y. Li et al.

    Comprehensive consideration of strategy updating promotes cooperation in the prisoner’s dilemma game

    Physica A: Stat. Mech. Appl.

    (2014)
  • Q. Liu et al.

    A HMM-based method to predict the transmembrane regions of β-barrel membrane proteins

    Comput. Biol. Chem.

    (2003)
  • Z. Liu et al.

    A new belief-based K-nearest neighbor classification method

    Pattern Recog.

    (2013)
  • C.K. Murphy

    Combining belief functions when evidence conflicts

    Decis. Supp. Syst.

    (2000)
  • C.R. Parikh et al.

    Application of Dempster-Shafer theory in condition monitoring applications: a case study

    Pattern Recog. Lett.

    (2001)
  • B.S. Reddy et al.

    Concept-based evidential reasoning for multimodal fusion in human computer interaction

    Appl. Soft Comput.

    (2010)
  • G. Rogova

    Combining the results of several neural network classifiers

    Neural Netwo.

    (1994)
  • X. Su et al.

    Dependence assessment in human reliability analysis using evidence theory and AHP

    Risk Anal.

    (2015)
  • M. Tabassian et al.

    Combining complementary information sources in the Dempster-Shafer framework for solving classification problems with imperfect labels

    Knowl. Based Syst.

    (2012)
  • Z. Tao et al.

    Group decision making with fuzzy linguistic preference relations via cooperative games method

    Comput. Indust. Eng.

    (2015)
  • C. Thiel et al.

    Using Dempster-Shafer theory in MCF systems to reject samples

    Lect. Notes Comput. Sci.

    (2005)
  • Z. Wang et al.

    Universal scaling for the dilemma strength in evolutionary games

    Phys. Life Rev.

    (2015)
  • Z. Wang et al.

    Insight into the so-called spatial reciprocity

    Phys. Rev. E

    (2013)
  • Z. Wang et al.

    Evolutionary games on multilayer networks: a colloquium

    Eur. Phys. J. B

    (2015)
  • R.R. Yager

    Combining various types of belief structures

    Inf. Sci.

    (2015)
  • J.-B. Yang et al.

    Belief rule-based methodology for mapping consumer preferences and setting product targets

    Expert Syst. Appl.

    (2012)
  • X. Zhang et al.

    IFSJSP: a novel methodology for the job-shop scheduling problem based on intuitionistic fuzzy sets

    Int. J. Prod. Res.

    (2013)
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