An improved method to construct basic probability assignment based on the confusion matrix for classification problem
Introduction
Dempster–Shafer evidence theory [9], [45], also called Dempster–Shafer theory, has been widely applied in many fields, such as information fusion [50], classification [5], [37], [38], and others [4], [10], [11], [12], [13], [16], [20], [25], [42], [49], [57], [68]. Tabassian et al. [51], [52] used Dempster–Shafer theory to handle data with imperfect labels in ensemble learning, and addressed the situation that the class memberships of the training data are subject to ambiguity. Deng [19] proposed a generalized evidence theory (GET) to address conflict management in an open world environment. Thanks to its flexibility, Dempster–Shafer theory has been combined with other theories like fuzzy set theory [8], [31], [69] and genetic algorithm [22], and many useful tools have been developed to handle various types of uncertainty, which further extends the application of the Dempster–Shafer theory. For instance, in [32], Kang et al. proposed an uncertain-graph structure, called evidential cognitive map (ECM), to represent causal reasoning by combining the cognitive maps and Dempster–Shafer theory. Recently, in the fields of evolutionary game theory [6], [7], [15], [58], [59], [60], [61], [62], [63], [64] and game theory [53], Dempster–Shafer evidence theory has also attracted some interests [17], [18], [35].
The determination of basic probability assignment (BPA) is one of the most important problems in evidential systems. The construction of BPA based on the confusion matrix is a practical and effective method [1], [2], [24], [40], [43], [54], [65]. In a previous related study, Xu et al. [65] presented an elegant method for the construction of BPA based on recognition rate, substitution rate, and rejection rate of the confusion matrix. However, Xu et al.’s method does not consider the difference of the classifier’s recognition ability for different classes. To overcome the shortcoming, Parikh et al. [40] proposed a modified method, which is more effective and has been successfully used in condition monitoring. The improvement proposed by Parhikh et al. is on the basis of the prior knowledge provided by the confusion matrix. Specifically, that method utilized the precision rate of each actual class according to the confusion matrix. However, the prior knowledge contained in the confusion matrix is not only the precision rate, but also the recall rate of each class which is another important aspect to reflect the classifier’s recognition ability for each class.
Based on this idea, an improved BPA construction method is proposed based on the confusion matrix in this paper. Section 2 introduces some basic concepts and related previous work. Section 3 presents the proposed method. Section 4 gives an illustrative case to demonstrate the effectiveness of the proposed method. Section 5 concludes the paper.
Section snippets
Basic concepts
The Dempster–Shafer evidence theory [9], [45], first proposed by Dempster and further developed by Shafer, is widely used to handle uncertain information. In this theory, basic probability assignment (BPA) is used to represent the uncertain information, and Dempster’s rule of combination is used to combine multiple BPAs.
In Dempster–Shafer theory, a problem domain denoted by a finite nonempty set Ω of mutually exclusive and exhaustive hypotheses is called the frame of discernment. Let denote
Proposed method
Based on the abundant prior knowledge contained in the confusion matrix, an improved method to construct the BPA is proposed in this section. Generally, a confusion matrix contains the information about actual and predicted classifications given by a classification system. In order to evaluate the performance of such systems, the data in the matrix is usually used. Based on the data coming from the confusion matrix, some indices, for instances accuracy, sensitivity (also called recall),
Case study
In this section, the prediction of transmembrane protein topology is used to illustrate the our proposed method, partial results are from our previous study [14]. The topology of transmembrane proteins, i.e. the number and position of the transmembrane helixes and the in/out location of the N and C terminals of the protein sequence, is an important issue in the study of transmembrane proteins [21], [36]. For a protein sequence, if both the transmembrane helixes and location of the N and C
Conclusion
As frequently stressed in previous studies, the determination of BPA is one of the most key problem in the application of Dempster–Shafer evidence theory. And in an evidential multiple classifiers system, the construction of BPA has a great influence on the classification performance. In this paper, an improved BPA construction method is proposed based on the confusion matrix for classification problem. The proposed method makes full use of the available information contained in the confusion
Acknowledgments
The authors thank the anonymous reviewers for their valuable comments and suggestions to improve this paper. The work is partially supported by National High Technology Research and Development Program of China (863 Program) (Grant No. 2013AA013801), National Natural Science Foundation of China (Grant Nos. 61174022, 61573290), the open funding project of State Key Laboratory of Virtual Reality Technology and Systems, Beihang University (Grant No. BUAA-VR-14KF-02), Fundamental Research Funds for
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