Binless strategies for estimation of information from neural data

Jonathan D. Victor
Phys. Rev. E 66, 051903 – Published 11 November 2002
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Abstract

We present an approach to estimate information carried by experimentally observed neural spike trains elicited by known stimuli. This approach makes use of an embedding of the observed spike trains into a set of vector spaces, and entropy estimates based on the nearest-neighbor Euclidean distances within these vector spaces [L. F. Kozachenko and N. N. Leonenko, Probl. Peredachi Inf. 23, 9 (1987)]. Using numerical examples, we show that this approach can be dramatically more efficient than standard bin-based approaches such as the “direct” method [S. P. Strong, R. Koberle, R. R. de Ruyter van Steveninck, and W. Bialek, Phys. Rev. Lett. 80, 197 (1998)] for amounts of data typically available from laboratory experiments.

  • Received 5 November 2001

DOI:https://doi.org/10.1103/PhysRevE.66.051903

©2002 American Physical Society

Authors & Affiliations

Jonathan D. Victor*

  • Department of Neurology and Neuroscience, Weill Medical College of Cornell University, 1300 York Avenue, New York, New York 10021

  • *FAX: 212 746 8984. Email address: jdvicto@med.cornell.edu

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Vol. 66, Iss. 5 — November 2002

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