Published September 20, 2018
| Version 1.0.0
Software
Open
fOPT tools
Description
This package is written for the iterative reconstruction and visualisation of fluorescent optical projection tomography data. It relies on MATLAB 64-bit R2016b or later, and requires the Image Processing Toolbox and the Parallel Computing Toolbox.
The experimental data were obtained from a zebrafish embryo that was two days post fertilization and expressed eGFP in endothelium. Both fluorescence and bright field measurements of the head and the tail of the same sample are available. The data was acquired using an in-house OPT setup. The videos attached are examples of reconstructions.
See the readme file in fopt-tools.zip for more information.
Files
fopt-tools.zip
Files
(11.7 GB)
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