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2015 | OriginalPaper | Buchkapitel

45. Low Labeling 13C Metabolic Flux Analysis of Saccharomyces cerevisiae Using Gas Chromatography–Combustion–Isotope Ratio Mass Spectrometry

verfasst von : Qi-ding Zhong, Guo-hui Li, Dong-dong Zhao, Dao-bing Wang, Shi-gang Shen, Zheng-he Xiong

Erschienen in: Advances in Applied Biotechnology

Verlag: Springer Berlin Heidelberg

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Abstract

The applicability of gas chromatography–combustion–isotope ratio mass spectrometry (GC–C–IRMS) for the quantification of 13C enrichment of proteinogenic amino acids in metabolic tracer experiments was evaluated in this paper. We measured the 13C enrichment of proteinogenic amino acids in hydrolyzates using GC–C–IRMS from a series of parallel batch cultivations of Saccharomyces cerevisiae, which was cultured by mixtures of natural glucose and [1−13C] glucose, containing 0, 0.5, 1, and 2 % [1−13C] glucose, respectively. By decreasing the [1−13C] glucose content, kinetic isotope effects played an increasing role but could be corrected. The 13C metabolic algorithm and matrix algorithms were optimized in this study. The central metabolism of vivo fluxes were determined by the calculation method optimization. The obtained flux distribution was similar to published results, which obtained from GC–MS method using conventional high labeling (99 %). The GC–C–IRMS-based method involves low labeling (0.5 %) degree of expensive tracer substrate, and suits well for larger laboratory and industrial pilot-scale fermentations.

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Metadaten
Titel
Low Labeling 13C Metabolic Flux Analysis of Saccharomyces cerevisiae Using Gas Chromatography–Combustion–Isotope Ratio Mass Spectrometry
verfasst von
Qi-ding Zhong
Guo-hui Li
Dong-dong Zhao
Dao-bing Wang
Shi-gang Shen
Zheng-he Xiong
Copyright-Jahr
2015
Verlag
Springer Berlin Heidelberg
DOI
https://doi.org/10.1007/978-3-662-46318-5_45

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