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2020 | OriginalPaper | Buchkapitel

Rhizosphere as Hotspot for Plant-Soil-Microbe Interaction

verfasst von : Shamina Imran Pathan, Maria Teresa Ceccherini, Francesco Sunseri, Antonio Lupini

Erschienen in: Carbon and Nitrogen Cycling in Soil

Verlag: Springer Singapore

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Abstract

In the last decades, many studies were addressed to focus the interplay between plant and microbial community into the soil and especially in the small soil zone in contact to plant root, called rhizosphere, which can be considered as a hotspot for interactions and therefore is a major target for improving nutrient use efficiency in crops. In this regard, unraveling the microbial activities that can be used to improve nutrient use efficiency may be the major challenge considering a sustainable agricultural contest. However, although using different approaches (metabolomics and transcriptomic) it has made it possible to characterize many interaction mechanisms, more remains largely unknown. Here, we summarize and discuss the abiotic and biotic factors that may manage plant-microbe interactions in the rhizosphere as well as in those parts of the soil furthest from the root, focusing on root architecture and nitrate as well.

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Literatur
Zurück zum Zitat Agrios GN (2005) Plant pathology, 5th edn. Elsevier Academic Press Inc., New York Agrios GN (2005) Plant pathology, 5th edn. Elsevier Academic Press Inc., New York
Zurück zum Zitat Akiyama K, Matsuzaki K, Hayashi H (2005) Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi. Nature 435:824–827CrossRef Akiyama K, Matsuzaki K, Hayashi H (2005) Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi. Nature 435:824–827CrossRef
Zurück zum Zitat Allen MF, Morris SJ, Edwards F, Allen EB (1995) Microbe– plant interactions in Mediterranean-type habitats: shifts in fungal symbiotic and saprophytic functioning in response to global change. In: Moreno JM, Oechel WC (eds) Global change and Mediterranean-type ecosystems. Springer, New York, pp 287–305CrossRef Allen MF, Morris SJ, Edwards F, Allen EB (1995) Microbe– plant interactions in Mediterranean-type habitats: shifts in fungal symbiotic and saprophytic functioning in response to global change. In: Moreno JM, Oechel WC (eds) Global change and Mediterranean-type ecosystems. Springer, New York, pp 287–305CrossRef
Zurück zum Zitat Antoun H, Kloepper JW (2001) Plant growth promoting rhizobacteria. In: Brenner S, Miller JH (eds) Encyclopedia of genetics. Academic, New York, pp 1477–1480CrossRef Antoun H, Kloepper JW (2001) Plant growth promoting rhizobacteria. In: Brenner S, Miller JH (eds) Encyclopedia of genetics. Academic, New York, pp 1477–1480CrossRef
Zurück zum Zitat Arora NK, Tewari S, Singh S, Lal N, Maheshwari DK (2012) PGPR for protection of plant health under saline conditions. In: Maheshwari DK (ed) Bacteria in agrobiology: stress management. Springer, Heidelberg, pp 239–258CrossRef Arora NK, Tewari S, Singh S, Lal N, Maheshwari DK (2012) PGPR for protection of plant health under saline conditions. In: Maheshwari DK (ed) Bacteria in agrobiology: stress management. Springer, Heidelberg, pp 239–258CrossRef
Zurück zum Zitat Ashoka P, Meena RS, Kumar S, Yadav GS, Layek J (2017) Green nanotechnology is a key for eco-friendly agriculture. J Clean Prod 142:4440–4441CrossRef Ashoka P, Meena RS, Kumar S, Yadav GS, Layek J (2017) Green nanotechnology is a key for eco-friendly agriculture. J Clean Prod 142:4440–4441CrossRef
Zurück zum Zitat Assmus B, Hutzler P, Kirchhof G et al (1995) In situ localization of Azospirillum brasiliense in the rhizosphere of wheat with fluorescently labeled, rRNA-targeted oligonucleotide probes and scanning confocal laser microscopy. Appl Environ Microbiol 61:1013–1019 Assmus B, Hutzler P, Kirchhof G et al (1995) In situ localization of Azospirillum brasiliense in the rhizosphere of wheat with fluorescently labeled, rRNA-targeted oligonucleotide probes and scanning confocal laser microscopy. Appl Environ Microbiol 61:1013–1019
Zurück zum Zitat Bacilio JM, Aguilar FS, Ventura ZE, Perez CE, Bouquelet S, Zenteno E (2002) Chemical characterization of root exudates from rice (Oryza sativa) and their effects on the chemotactic response of endophytic bacteria. Plant Soil 249:271–277CrossRef Bacilio JM, Aguilar FS, Ventura ZE, Perez CE, Bouquelet S, Zenteno E (2002) Chemical characterization of root exudates from rice (Oryza sativa) and their effects on the chemotactic response of endophytic bacteria. Plant Soil 249:271–277CrossRef
Zurück zum Zitat Badri DV, Vivanco JM (2009) Regulation and function of root exudates. Plant Cell Environ 32:666–681CrossRef Badri DV, Vivanco JM (2009) Regulation and function of root exudates. Plant Cell Environ 32:666–681CrossRef
Zurück zum Zitat Bais HP, Wier TL, Perry LG, Vivanco JM (2006) The role of root exudates in rhizosphere interaction with plants and other microorganisms. Annu Rev Plant Biol 57:233–266CrossRef Bais HP, Wier TL, Perry LG, Vivanco JM (2006) The role of root exudates in rhizosphere interaction with plants and other microorganisms. Annu Rev Plant Biol 57:233–266CrossRef
Zurück zum Zitat Baldani JI, Baldani VLD (2005) History on the biological fixation research in graminaceous plants: special reference on the Brazilian experience. An Acad Bras Cienc 77:549–579CrossRef Baldani JI, Baldani VLD (2005) History on the biological fixation research in graminaceous plants: special reference on the Brazilian experience. An Acad Bras Cienc 77:549–579CrossRef
Zurück zum Zitat Baraniya D, Puglisi E, Ceccherini MT, Pietramellara G, Giagnoni L, Arenella MR, Nannipieri P, Renella G (2016) Protease encoding microbial communities and protease activity of the rhizosphere and bulk soils of two maize lines with different N uptake efficiency. Soil Biol Biochem 96:176–179CrossRef Baraniya D, Puglisi E, Ceccherini MT, Pietramellara G, Giagnoni L, Arenella MR, Nannipieri P, Renella G (2016) Protease encoding microbial communities and protease activity of the rhizosphere and bulk soils of two maize lines with different N uptake efficiency. Soil Biol Biochem 96:176–179CrossRef
Zurück zum Zitat Bardgett RD, van der Putten WH (2014) Belowground biodiversity and ecosystem functioning. Nature 515:505–511CrossRef Bardgett RD, van der Putten WH (2014) Belowground biodiversity and ecosystem functioning. Nature 515:505–511CrossRef
Zurück zum Zitat Barman J, Samanta A, Saha B, Datta S (2016) Mycorrhiza: the oldest association between plant and fungi. Resonance, General article 21: 1093–1103CrossRef Barman J, Samanta A, Saha B, Datta S (2016) Mycorrhiza: the oldest association between plant and fungi. Resonance, General article 21: 1093–1103CrossRef
Zurück zum Zitat Beauregard PB, Chai Y, Vlamakis H, Losick R, Kolter R (2013) Bacillus subtilis biofilm induction by plant polysaccharides. Proc Natl Acad Sci USA 110:E1621–E1630CrossRef Beauregard PB, Chai Y, Vlamakis H, Losick R, Kolter R (2013) Bacillus subtilis biofilm induction by plant polysaccharides. Proc Natl Acad Sci USA 110:E1621–E1630CrossRef
Zurück zum Zitat Beckman CH (1987) The nature of wilt diseases of plants. American Phytopathological Society Press, St. Paul Beckman CH (1987) The nature of wilt diseases of plants. American Phytopathological Society Press, St. Paul
Zurück zum Zitat Behm JE, Geurts R, Kiers ET (2014) Parasponia: a novel system for studying mutualism stability. Trends in Plant Sci 19:757–763CrossRef Behm JE, Geurts R, Kiers ET (2014) Parasponia: a novel system for studying mutualism stability. Trends in Plant Sci 19:757–763CrossRef
Zurück zum Zitat Bekkara F, Jay M, Viricel MR, Rome S (1998) Distribution of phenolic compounds within seed and seedlings of two Vicia faba varieties differing in their seed tannin content and study of their seed and root phenolic exudations. Plant Soil 203:27–36CrossRef Bekkara F, Jay M, Viricel MR, Rome S (1998) Distribution of phenolic compounds within seed and seedlings of two Vicia faba varieties differing in their seed tannin content and study of their seed and root phenolic exudations. Plant Soil 203:27–36CrossRef
Zurück zum Zitat Bellegarde F, Gojon A, Martin A (2017) Signals and players in the transcriptional regulation of root responses by local and systemic N signaling in Arabidopsis thaliana. J Exp Bot 68:2553–2565CrossRef Bellegarde F, Gojon A, Martin A (2017) Signals and players in the transcriptional regulation of root responses by local and systemic N signaling in Arabidopsis thaliana. J Exp Bot 68:2553–2565CrossRef
Zurück zum Zitat Bender SF, Wagg C, van der Heijden MGA (2016) An underground revolution: biodiversity and soil ecological engineering for agricultural sustainability. Trends Ecol Evol 31:440–452CrossRef Bender SF, Wagg C, van der Heijden MGA (2016) An underground revolution: biodiversity and soil ecological engineering for agricultural sustainability. Trends Ecol Evol 31:440–452CrossRef
Zurück zum Zitat Berendsen RL, Pieterse CM, Bakker PA (2012) The rhizosphere microbiome and plant health. Trends Plant Sci 17:478–486CrossRef Berendsen RL, Pieterse CM, Bakker PA (2012) The rhizosphere microbiome and plant health. Trends Plant Sci 17:478–486CrossRef
Zurück zum Zitat Berg G, Smalla K (2009) Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere. FEMS Microbiol Ecol 68:1–13CrossRef Berg G, Smalla K (2009) Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere. FEMS Microbiol Ecol 68:1–13CrossRef
Zurück zum Zitat Bever JD, Dickie IA, Facelli E, Facelli JM, Klironomos J, Moora M, Rillig MC, Stock WD, Tibbett M, Zobel M (2010) Rooting theories of plant community ecology in microbial interactions. Trends Ecol Evol 25:468–478CrossRef Bever JD, Dickie IA, Facelli E, Facelli JM, Klironomos J, Moora M, Rillig MC, Stock WD, Tibbett M, Zobel M (2010) Rooting theories of plant community ecology in microbial interactions. Trends Ecol Evol 25:468–478CrossRef
Zurück zum Zitat Bhardwaj D, Ansari MW, Sahoo RK, Tuteja N (2014) Biofertilizer function as key player in sustainable agriculture by improving soil fertility, plant tolerance and crop productivity. Microb Cell Fact 13:1–10CrossRef Bhardwaj D, Ansari MW, Sahoo RK, Tuteja N (2014) Biofertilizer function as key player in sustainable agriculture by improving soil fertility, plant tolerance and crop productivity. Microb Cell Fact 13:1–10CrossRef
Zurück zum Zitat Bhattacharyya PN, Jha DK (2012) Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture. World J Microbiol Biotechnol 28:1327–1350CrossRef Bhattacharyya PN, Jha DK (2012) Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture. World J Microbiol Biotechnol 28:1327–1350CrossRef
Zurück zum Zitat Boddey RM, Uruquiaga S, Alves BJR et al (2003) Endophytic nitrogen fixation in sugarcane: present knowledge and future applications. Plant Soil 252:139–149CrossRef Boddey RM, Uruquiaga S, Alves BJR et al (2003) Endophytic nitrogen fixation in sugarcane: present knowledge and future applications. Plant Soil 252:139–149CrossRef
Zurück zum Zitat Boulter D, Jeremy JJ, Wilding M (1966) Amino acids liberated into the culture medium by pea seedling roots. Plant Soil 24:121–127CrossRef Boulter D, Jeremy JJ, Wilding M (1966) Amino acids liberated into the culture medium by pea seedling roots. Plant Soil 24:121–127CrossRef
Zurück zum Zitat Breidenbach B, Pump J, Dumont MG (2016) Microbial community structure in the rhizosphere of rice plants. Front Microbiol 6:1537CrossRef Breidenbach B, Pump J, Dumont MG (2016) Microbial community structure in the rhizosphere of rice plants. Front Microbiol 6:1537CrossRef
Zurück zum Zitat Brimecombe MJ, De Leij FAAM, Lynch JM (2007) Rhizodeposition and microbial populations. In: Pinton R et al (eds) The rhizosphere biochemistry and organic substances at the soil–plant interface. CRC Press, Boca Raton, pp 73–109 Brimecombe MJ, De Leij FAAM, Lynch JM (2007) Rhizodeposition and microbial populations. In: Pinton R et al (eds) The rhizosphere biochemistry and organic substances at the soil–plant interface. CRC Press, Boca Raton, pp 73–109
Zurück zum Zitat Briones AM, Okabe S, Umemiya Y et al (2003) Ammonia – oxidizing bacteria on root biofilms and their possible contribution to N use efficiency of different rice cultivars. Plant Soil 250:335–248CrossRef Briones AM, Okabe S, Umemiya Y et al (2003) Ammonia – oxidizing bacteria on root biofilms and their possible contribution to N use efficiency of different rice cultivars. Plant Soil 250:335–248CrossRef
Zurück zum Zitat Brown DJF, Robertson WM, Trudgill DL (1995) Transmission of viruses by plant nematodes. Annu Rev Phytopathol 33:223–249CrossRef Brown DJF, Robertson WM, Trudgill DL (1995) Transmission of viruses by plant nematodes. Annu Rev Phytopathol 33:223–249CrossRef
Zurück zum Zitat Bruehl GW (1987) Soilborne Plant Pathogens. Macmillan Publishing Company, New York Bruehl GW (1987) Soilborne Plant Pathogens. Macmillan Publishing Company, New York
Zurück zum Zitat Bulgarelli D, Rott M, Schlaeppi K, Ver Loren van Themaat E, Ahmadinejad N, Assenza F, Rauf P, Huettel B, Reinhardt R, Schmelzer E, Peplies J, Gloeckner FO, Amann R, Eickhorst T, Schulze-Lefert P (2012) Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota. Nature 488(7409):91–95CrossRef Bulgarelli D, Rott M, Schlaeppi K, Ver Loren van Themaat E, Ahmadinejad N, Assenza F, Rauf P, Huettel B, Reinhardt R, Schmelzer E, Peplies J, Gloeckner FO, Amann R, Eickhorst T, Schulze-Lefert P (2012) Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota. Nature 488(7409):91–95CrossRef
Zurück zum Zitat Bulgarelli D et al (2013a) Structure and functions of the bacterial microbiota of plants. Annu Rev Plant Biol 64:807–838CrossRef Bulgarelli D et al (2013a) Structure and functions of the bacterial microbiota of plants. Annu Rev Plant Biol 64:807–838CrossRef
Zurück zum Zitat Bulgarelli D, Schlaeppi K, Spaepen S, Ver Loren van Themaat E, Schulze-Lefert P (2013b) Structure and functions of the bacterial microbiota of plants. Annu Rev Plant Biol 64:807–838CrossRef Bulgarelli D, Schlaeppi K, Spaepen S, Ver Loren van Themaat E, Schulze-Lefert P (2013b) Structure and functions of the bacterial microbiota of plants. Annu Rev Plant Biol 64:807–838CrossRef
Zurück zum Zitat Burns JH, Anacker BL, Strauss SY, Burke DJ (2015) Soil microbial community variation correlates most strongly with plant species identity, followed by soil chemistry, spatial location and plant genus. AoB Plants 7:plv030CrossRef Burns JH, Anacker BL, Strauss SY, Burke DJ (2015) Soil microbial community variation correlates most strongly with plant species identity, followed by soil chemistry, spatial location and plant genus. AoB Plants 7:plv030CrossRef
Zurück zum Zitat Cakmak I, Erenoglu B, Gülüt KY, Derici R, Römheld V (1998) Light-mediated release of phytosiderophores in wheat and barley under iron or zinc deficiency. Plant Soil 202:309–315CrossRef Cakmak I, Erenoglu B, Gülüt KY, Derici R, Römheld V (1998) Light-mediated release of phytosiderophores in wheat and barley under iron or zinc deficiency. Plant Soil 202:309–315CrossRef
Zurück zum Zitat Campbell RN (1996) Fungal transmission of plant viruses. Annu Rev Phytopathol 34:87–108CrossRef Campbell RN (1996) Fungal transmission of plant viruses. Annu Rev Phytopathol 34:87–108CrossRef
Zurück zum Zitat Cárdenas L, Domínguez J, Quinto C, López-Lara IM, Lugtenberg BJJ, Spaink HP, Rademaker GJ, Haverkamp J, Thomas-Oates JE (1995) Isolation, chemical structures and biological activity of the lipo-chitin oligosaccharide nodulation signals from Rhizobium etli. Plant Mol Biol 29(453):464 Cárdenas L, Domínguez J, Quinto C, López-Lara IM, Lugtenberg BJJ, Spaink HP, Rademaker GJ, Haverkamp J, Thomas-Oates JE (1995) Isolation, chemical structures and biological activity of the lipo-chitin oligosaccharide nodulation signals from Rhizobium etli. Plant Mol Biol 29(453):464
Zurück zum Zitat Cavaglieri L, Orlando J, Etcheverry M (2009) Rhizosphere microbial community structure at different stages and root locations. Microbial Res 164:391–399CrossRef Cavaglieri L, Orlando J, Etcheverry M (2009) Rhizosphere microbial community structure at different stages and root locations. Microbial Res 164:391–399CrossRef
Zurück zum Zitat Chen XP, Cui ZL, Vitousek PM et al (2011) Integrated soil–crop system management for food security. PNAS 108:6399–6404CrossRef Chen XP, Cui ZL, Vitousek PM et al (2011) Integrated soil–crop system management for food security. PNAS 108:6399–6404CrossRef
Zurück zum Zitat Cheng L, Tang X, Vance CP, White PJ, Zhang F, Shen J (2014) Interactions between light intensity and phosphorus nutrition affect the phosphate-mining capacity of white lupin (Lupinus albus L.). J Exp Bot 65:2995–3003CrossRef Cheng L, Tang X, Vance CP, White PJ, Zhang F, Shen J (2014) Interactions between light intensity and phosphorus nutrition affect the phosphate-mining capacity of white lupin (Lupinus albus L.). J Exp Bot 65:2995–3003CrossRef
Zurück zum Zitat Cichy KA, Blair MW, Mendoza CHG, Snapp SS, Kelly JD (2009) QTL analysis of root architecture traits and low phosphorus tolerance in an Andean bean population. Crop Sci 49:59–68CrossRef Cichy KA, Blair MW, Mendoza CHG, Snapp SS, Kelly JD (2009) QTL analysis of root architecture traits and low phosphorus tolerance in an Andean bean population. Crop Sci 49:59–68CrossRef
Zurück zum Zitat Clarholm M, Skyllberg U, Rosling A (2015) Organic acid induced release of nutrients from metal-stabilized soil organic matter. The unbutton model. Soil Biol Biochem 84:168–176CrossRef Clarholm M, Skyllberg U, Rosling A (2015) Organic acid induced release of nutrients from metal-stabilized soil organic matter. The unbutton model. Soil Biol Biochem 84:168–176CrossRef
Zurück zum Zitat Cordero OX, Datta MS (2016) Microbial interactions and community assembly at microscales. Curr Opin Microbiol 31:227–234CrossRef Cordero OX, Datta MS (2016) Microbial interactions and community assembly at microscales. Curr Opin Microbiol 31:227–234CrossRef
Zurück zum Zitat Crawford NM (1995) Nitrate: nutrient and signal for plant growth. Plant Cell 7:859–868 Crawford NM (1995) Nitrate: nutrient and signal for plant growth. Plant Cell 7:859–868
Zurück zum Zitat Dadhich RK, Meena RS (2014) Performance of Indian mustard (Brassica juncea L.) in Response to foliar spray of thiourea and thioglycollic acid under different irrigation levels. Indian J Ecol 41(2):376–378 Dadhich RK, Meena RS (2014) Performance of Indian mustard (Brassica juncea L.) in Response to foliar spray of thiourea and thioglycollic acid under different irrigation levels. Indian J Ecol 41(2):376–378
Zurück zum Zitat Dadhich RK, Meena RS, Reager ML, Kansotia BC (2015) Response of bio-regulators to yield and quality of Indian mustard (Brassica juncea L. Czernj. and Cosson) under different irrigation environments. J Appl Nat Sci 7(1):52–57CrossRef Dadhich RK, Meena RS, Reager ML, Kansotia BC (2015) Response of bio-regulators to yield and quality of Indian mustard (Brassica juncea L. Czernj. and Cosson) under different irrigation environments. J Appl Nat Sci 7(1):52–57CrossRef
Zurück zum Zitat Dai X, Wang Y, Yang A, Zhang WH (2012) OsMYB2P-1, an R2R3 MYB transcription factor, is involved in the regulation of phosphatestarvation responses and root architecture in rice. Plant Physiol 159:169–183CrossRef Dai X, Wang Y, Yang A, Zhang WH (2012) OsMYB2P-1, an R2R3 MYB transcription factor, is involved in the regulation of phosphatestarvation responses and root architecture in rice. Plant Physiol 159:169–183CrossRef
Zurück zum Zitat Dakora FD, Phillips DA (2002) Root exudates as mediators of mineral acquisition in low-nutrient environments. Plant Soil 245:35–47CrossRef Dakora FD, Phillips DA (2002) Root exudates as mediators of mineral acquisition in low-nutrient environments. Plant Soil 245:35–47CrossRef
Zurück zum Zitat Datta R, Kelkar A, Baraniya D, Molaei A, Moulick A, Meena RS, Formanek P (2017) Enzymatic degradation of lignin in soil: a review. Sustain MDPI 9(7):1163; 1–18CrossRef Datta R, Kelkar A, Baraniya D, Molaei A, Moulick A, Meena RS, Formanek P (2017) Enzymatic degradation of lignin in soil: a review. Sustain MDPI 9(7):1163; 1–18CrossRef
Zurück zum Zitat De Angelis KM, Lindow SE, Firestone MK (2008) Bacterial quorum sensing and nitrogen cycling in rhizosphere soil. FEMS Microbial Ecol 66:197–207CrossRef De Angelis KM, Lindow SE, Firestone MK (2008) Bacterial quorum sensing and nitrogen cycling in rhizosphere soil. FEMS Microbial Ecol 66:197–207CrossRef
Zurück zum Zitat Danhorn T, Fuqua C (2007) Biofilm formation by plant-associated bacteria. Annu Rev Microbiol 61(1):401–422CrossRef Danhorn T, Fuqua C (2007) Biofilm formation by plant-associated bacteria. Annu Rev Microbiol 61(1):401–422CrossRef
Zurück zum Zitat Döbereiner J (1992) History and new perspective of diazotrophs in association with non-leguminous plants. Symbiosis 13:1–13 Döbereiner J (1992) History and new perspective of diazotrophs in association with non-leguminous plants. Symbiosis 13:1–13
Zurück zum Zitat Donn S, Kirkegaard JA, Perera G, Richardson AE, Watt M (2014) Evolution of bacterial communities in wheat crop rhizosphere. Environ Microbiol 17:610–621CrossRef Donn S, Kirkegaard JA, Perera G, Richardson AE, Watt M (2014) Evolution of bacterial communities in wheat crop rhizosphere. Environ Microbiol 17:610–621CrossRef
Zurück zum Zitat Doornbos RF, van Loon LC, Bakker PAHM (2012) Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review. Agron Sustain Dev 32:227–243CrossRef Doornbos RF, van Loon LC, Bakker PAHM (2012) Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review. Agron Sustain Dev 32:227–243CrossRef
Zurück zum Zitat Drogue B, Dore H, Borland S, Wisniewski-Dyé F, Prigent-Combaret C (2012) Which specificity in cooperation between phytostimulating rhizobacteria and plants? Res Microbiol 163:500–510CrossRef Drogue B, Dore H, Borland S, Wisniewski-Dyé F, Prigent-Combaret C (2012) Which specificity in cooperation between phytostimulating rhizobacteria and plants? Res Microbiol 163:500–510CrossRef
Zurück zum Zitat Edwards J et al (2015) Structure, variation, and assembly of the root-associated microbiomes of rice. PNAS 112:E911–E920CrossRef Edwards J et al (2015) Structure, variation, and assembly of the root-associated microbiomes of rice. PNAS 112:E911–E920CrossRef
Zurück zum Zitat Elmerich C, Newton WE (2007) Associative and endophytic Nitrogen fixing Bacteria and Cyanobacterial Associations – introduction. Springer, DordrechtCrossRef Elmerich C, Newton WE (2007) Associative and endophytic Nitrogen fixing Bacteria and Cyanobacterial Associations – introduction. Springer, DordrechtCrossRef
Zurück zum Zitat FAO (2009) The state of food and agriculture, Rome FAO (2009) The state of food and agriculture, Rome
Zurück zum Zitat Franche C, Lindström K, Elmerich C (2009) Nitrogen fixing bacteria associated with leguminous and non-leguminous plants. Plant Soil 321:35–59CrossRef Franche C, Lindström K, Elmerich C (2009) Nitrogen fixing bacteria associated with leguminous and non-leguminous plants. Plant Soil 321:35–59CrossRef
Zurück zum Zitat Fries N (1987) Ecological and evolutionary aspects of spore germination in the higher Basidiomycetes. Trans Br Mycol Soc 88:1–7CrossRef Fries N (1987) Ecological and evolutionary aspects of spore germination in the higher Basidiomycetes. Trans Br Mycol Soc 88:1–7CrossRef
Zurück zum Zitat Friskop A, Marker S, Gulya T (2009) Downy mildew of sunflower. State Agricultural Experiment Station, New York Friskop A, Marker S, Gulya T (2009) Downy mildew of sunflower. State Agricultural Experiment Station, New York
Zurück zum Zitat Garcia K, Delaux P, Cope KR, Ané J (2015) Molecular signals require for the establishment and maintenance of ectomycorrhizal symbiosis. New Phytol 208:79–87CrossRef Garcia K, Delaux P, Cope KR, Ané J (2015) Molecular signals require for the establishment and maintenance of ectomycorrhizal symbiosis. New Phytol 208:79–87CrossRef
Zurück zum Zitat Genin S, Boucher C (2004) Lessons learned from the genomeanalysis of Ralstonia solanacearum. Annu Rev Phytopathol 42:107–134CrossRef Genin S, Boucher C (2004) Lessons learned from the genomeanalysis of Ralstonia solanacearum. Annu Rev Phytopathol 42:107–134CrossRef
Zurück zum Zitat Genre A, Chabaud M, Balzergue C, Puech-Pagès V, Novero M, Rey T, Fournier J, Rochange S, Bécard G, Bonfante P, Barker DG (2013) Short-chain chitin oligomers from arbuscular mycorrhizal fungi trigger nuclear Ca2+ spiking in Medicago truncatula roots and their production is enhanced by strigolactone. New Phytol 198:190–202CrossRef Genre A, Chabaud M, Balzergue C, Puech-Pagès V, Novero M, Rey T, Fournier J, Rochange S, Bécard G, Bonfante P, Barker DG (2013) Short-chain chitin oligomers from arbuscular mycorrhizal fungi trigger nuclear Ca2+ spiking in Medicago truncatula roots and their production is enhanced by strigolactone. New Phytol 198:190–202CrossRef
Zurück zum Zitat George TS, Simpson RJ, Hadobas PA, Richardson AE (2005) Expression of a fungal phytase gene in Nicotiana tabacum improves phosphorus nutrition of plants grown in amended soils. Plant Biotechnol J 3:129–140CrossRef George TS, Simpson RJ, Hadobas PA, Richardson AE (2005) Expression of a fungal phytase gene in Nicotiana tabacum improves phosphorus nutrition of plants grown in amended soils. Plant Biotechnol J 3:129–140CrossRef
Zurück zum Zitat Giles E.D. Oldroyd, J. Allan Downie, (2008) Coordinating Nodule Morphogenesis with Rhizobial Infection in Legumes. Annual Review of Plant Biology 59 (1):519-546CrossRef Giles E.D. Oldroyd, J. Allan Downie, (2008) Coordinating Nodule Morphogenesis with Rhizobial Infection in Legumes. Annual Review of Plant Biology 59 (1):519-546CrossRef
Zurück zum Zitat Giles E.D. Oldroyd, Jeremy D. Murray, Philip S. Poole, J. Allan Downie, (2011) The Rules of Engagement in the Legume-Rhizobial Symbiosis. Annual Review of Genetics 45 (1):119-144CrossRef Giles E.D. Oldroyd, Jeremy D. Murray, Philip S. Poole, J. Allan Downie, (2011) The Rules of Engagement in the Legume-Rhizobial Symbiosis. Annual Review of Genetics 45 (1):119-144CrossRef
Zurück zum Zitat Glick BR (1995) The enhancement of plant growth by free-living bacteria. Can J Microbiol 41:109–117CrossRef Glick BR (1995) The enhancement of plant growth by free-living bacteria. Can J Microbiol 41:109–117CrossRef
Zurück zum Zitat Gojon A, Nacry P, Davidian JC (2009) Root uptake regulation: a central process for NPS homeostasis in plants. Curr Opin Plant Biol 12:328–338CrossRef Gojon A, Nacry P, Davidian JC (2009) Root uptake regulation: a central process for NPS homeostasis in plants. Curr Opin Plant Biol 12:328–338CrossRef
Zurück zum Zitat Good AG, Shrawat AK, Muench DG (2004) Can less yield more? Is reducing nutrient input into the environment compatible with maintaining crop production? Trends Plant Sci 9:597–605CrossRef Good AG, Shrawat AK, Muench DG (2004) Can less yield more? Is reducing nutrient input into the environment compatible with maintaining crop production? Trends Plant Sci 9:597–605CrossRef
Zurück zum Zitat Gray EJ, Smith DL (2005) Intracellular and extracellular PGPR: commonalities and distinctions in the plant-bac-terium signaling processes. Soil Biol Biochem 37:395–412CrossRef Gray EJ, Smith DL (2005) Intracellular and extracellular PGPR: commonalities and distinctions in the plant-bac-terium signaling processes. Soil Biol Biochem 37:395–412CrossRef
Zurück zum Zitat García-Salamanca A, Molina-Henares MA, van Dillewijn P, Solano J, Pizarro-Tobías P, Roca A, Duque E, Ramos JL (2013) Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil. Microb Biotechnol 6(1):36–44CrossRef García-Salamanca A, Molina-Henares MA, van Dillewijn P, Solano J, Pizarro-Tobías P, Roca A, Duque E, Ramos JL (2013) Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil. Microb Biotechnol 6(1):36–44CrossRef
Zurück zum Zitat Gupta G, Parihar SS, Ahirwar NK, Snehi SK, Singh S (2015) Plant growth promoting rhizobacteria (PGPR): current and future prospective for development of sustainable agriculture. J Microbial Biochem Technol 7:2 Gupta G, Parihar SS, Ahirwar NK, Snehi SK, Singh S (2015) Plant growth promoting rhizobacteria (PGPR): current and future prospective for development of sustainable agriculture. J Microbial Biochem Technol 7:2
Zurück zum Zitat Gyaneshwar P, Naresh Kumar G, Parekh LJ, Poole PS (2002) Role of soil microorganisms in improving P nutrition of plants. Plant Soil 245:83–93CrossRef Gyaneshwar P, Naresh Kumar G, Parekh LJ, Poole PS (2002) Role of soil microorganisms in improving P nutrition of plants. Plant Soil 245:83–93CrossRef
Zurück zum Zitat Hale MG, Moore LD (1979) Factors affecting root exudation. Adv Agron 31:93–124CrossRef Hale MG, Moore LD (1979) Factors affecting root exudation. Adv Agron 31:93–124CrossRef
Zurück zum Zitat Harrison MJ (2005) Signaling in the arbuscular mycorrhizal symbiosis. Annu Rev Microbiol 59:19–24CrossRef Harrison MJ (2005) Signaling in the arbuscular mycorrhizal symbiosis. Annu Rev Microbiol 59:19–24CrossRef
Zurück zum Zitat Hartmann A, Schmid M, Van Tuinen D, Berg G (2009) Plant-driven selection of microbes. Plant Soil 321:235–257CrossRef Hartmann A, Schmid M, Van Tuinen D, Berg G (2009) Plant-driven selection of microbes. Plant Soil 321:235–257CrossRef
Zurück zum Zitat Hennery A, Doucette W, Norton J, Bugbee B (2007) Changes in crested wheat grass root exudation caused by flood, drought and nutrient stress. J Environ Qual 36:904–912CrossRef Hennery A, Doucette W, Norton J, Bugbee B (2007) Changes in crested wheat grass root exudation caused by flood, drought and nutrient stress. J Environ Qual 36:904–912CrossRef
Zurück zum Zitat Hiltner L (1904) Ueber neuere Erfahrungen und Probleme auf dem Gebiete der Bodenbakteriologie und unter besonderer BerUcksichtigung der Grundungung und Brache. Arb Deut Landw Gesell 98:59–78 Hiltner L (1904) Ueber neuere Erfahrungen und Probleme auf dem Gebiete der Bodenbakteriologie und unter besonderer BerUcksichtigung der Grundungung und Brache. Arb Deut Landw Gesell 98:59–78
Zurück zum Zitat Huang XF, Chaparro JM, Reardon KF, Zhang R, Shen Q, Vivanco JM (2014) Rhizosphere interactions: root exudates, microbes, and microbial communities. Botany 92:267–275CrossRef Huang XF, Chaparro JM, Reardon KF, Zhang R, Shen Q, Vivanco JM (2014) Rhizosphere interactions: root exudates, microbes, and microbial communities. Botany 92:267–275CrossRef
Zurück zum Zitat Husain SS, Mckeen WE (1963) Interactions between strawberry roots and Rhizoctonia fragariae. Phytopathology 53:541–545 Husain SS, Mckeen WE (1963) Interactions between strawberry roots and Rhizoctonia fragariae. Phytopathology 53:541–545
Zurück zum Zitat Igual JM, Valverde A, Cervantes E, Velázquez E (2001) Phosphatesolubilizing bacteria as inoculants for agriculture: use of updated molecular techniques in their study. Agronomie 21:561–568CrossRef Igual JM, Valverde A, Cervantes E, Velázquez E (2001) Phosphatesolubilizing bacteria as inoculants for agriculture: use of updated molecular techniques in their study. Agronomie 21:561–568CrossRef
Zurück zum Zitat Ivanov VP (1962) Mutual effect through the root system of a mixed crop of corn and broad beans. Fiziol Rast 9:179–188 Ivanov VP (1962) Mutual effect through the root system of a mixed crop of corn and broad beans. Fiziol Rast 9:179–188
Zurück zum Zitat Jing Y, He Z, Yang X (2007) Role of soil rhizobacteria in phytoremediation of heavy metal contaminated soils. J Zhejiang Univ Sci B 8:192–207CrossRef Jing Y, He Z, Yang X (2007) Role of soil rhizobacteria in phytoremediation of heavy metal contaminated soils. J Zhejiang Univ Sci B 8:192–207CrossRef
Zurück zum Zitat Jones DL, Hodge A, Kuzyakov Y (2004) Plant and mycorrhizal regulation of rhizodeposition. New Phytol 163:459–480CrossRef Jones DL, Hodge A, Kuzyakov Y (2004) Plant and mycorrhizal regulation of rhizodeposition. New Phytol 163:459–480CrossRef
Zurück zum Zitat Jones DL et al (2009) Carbon flow in the rhizosphere: carbon trading at the soil–root interface. Plant Soil 321:5–33CrossRef Jones DL et al (2009) Carbon flow in the rhizosphere: carbon trading at the soil–root interface. Plant Soil 321:5–33CrossRef
Zurück zum Zitat Kardol P, Cornips NJ, van Kempen MML, Bakx-Schotman JMT, van der Putten WH (2007) Microbe-mediated plant–soil feedback causes historical contingency effects in plant community assembly. Ecol Monogr 77:147–162CrossRef Kardol P, Cornips NJ, van Kempen MML, Bakx-Schotman JMT, van der Putten WH (2007) Microbe-mediated plant–soil feedback causes historical contingency effects in plant community assembly. Ecol Monogr 77:147–162CrossRef
Zurück zum Zitat Katznelson H, Rouatt JW, Payne TMB (1954) Liberation of amino acids by plant roots in relation to Desiccation. Nature 174:1110–1111CrossRef Katznelson H, Rouatt JW, Payne TMB (1954) Liberation of amino acids by plant roots in relation to Desiccation. Nature 174:1110–1111CrossRef
Zurück zum Zitat Kawasaki A et al (2016a) Microbiome and exudates of the root and rhizosphere of Brachypodium distachyon, a model for wheat. PLoS One 11:e0164533CrossRef Kawasaki A et al (2016a) Microbiome and exudates of the root and rhizosphere of Brachypodium distachyon, a model for wheat. PLoS One 11:e0164533CrossRef
Zurück zum Zitat Kawasaki A, Donn S, Ryan PR, Mathesius U, Devilla R, Jones A et al (2016b) Microbiome and exudates of the root and rhizosphere of Brachypodium distachyon, a model for Wheat. PLoS One 11(10):e0164533CrossRef Kawasaki A, Donn S, Ryan PR, Mathesius U, Devilla R, Jones A et al (2016b) Microbiome and exudates of the root and rhizosphere of Brachypodium distachyon, a model for Wheat. PLoS One 11(10):e0164533CrossRef
Zurück zum Zitat Kloepper JW, Schroth MN (1978) In Proceedings of the 4th international conference on plant pathogenic bacteria vol. 2 (ed. Station de Pathologie Végétale et Phytobactériologie) 879–882 (Gibert-Clarey, Tours) Kloepper JW, Schroth MN (1978) In Proceedings of the 4th international conference on plant pathogenic bacteria vol. 2 (ed. Station de Pathologie Végétale et Phytobactériologie) 879–882 (Gibert-Clarey, Tours)
Zurück zum Zitat Kretzschmar T et al (2012) A petunia ABC protein controls strigolactone-dependent symbiotic signaling and branching. Nature 483:341–344CrossRef Kretzschmar T et al (2012) A petunia ABC protein controls strigolactone-dependent symbiotic signaling and branching. Nature 483:341–344CrossRef
Zurück zum Zitat Krouk G, Crawford NM, Coruzzi GM, Tsay Y-F (2010) Nitrate signaling: adaptation to fluctuating environments. Curr Opin Plant Biol 13(3):265–272CrossRef Krouk G, Crawford NM, Coruzzi GM, Tsay Y-F (2010) Nitrate signaling: adaptation to fluctuating environments. Curr Opin Plant Biol 13(3):265–272CrossRef
Zurück zum Zitat Krouk G, Ruffel S, Gutierrez RA, Gojon A, Crawford NM, Coruzzi GM, Lacombe B (2011) A framework integrating plant growth with hormones and nutrients. Trends Plant Sci 16:178–182CrossRef Krouk G, Ruffel S, Gutierrez RA, Gojon A, Crawford NM, Coruzzi GM, Lacombe B (2011) A framework integrating plant growth with hormones and nutrients. Trends Plant Sci 16:178–182CrossRef
Zurück zum Zitat Kulmatiski A, Beard KH, Stevens JR, Cobbold SM (2008) Plant-soil feedbacks: a meta-analytical review. Ecol Lett 11:980–992CrossRef Kulmatiski A, Beard KH, Stevens JR, Cobbold SM (2008) Plant-soil feedbacks: a meta-analytical review. Ecol Lett 11:980–992CrossRef
Zurück zum Zitat Kumar S, Meena RS, Bohra JS (2018) Interactive effect of sowing dates and nutrient sources on dry matter accumulation of Indian mustard (Brassica juncea L.). J Oilseed Brassica 9(1):72–76 Kumar S, Meena RS, Bohra JS (2018) Interactive effect of sowing dates and nutrient sources on dry matter accumulation of Indian mustard (Brassica juncea L.). J Oilseed Brassica 9(1):72–76
Zurück zum Zitat Lagrange H, Jay-Allgmand C, Lapeyrie F (2001) Rutin, the phenolglycoside from eucalyptus root exudates, stimulates Pisolithus hyphal growth at picomolar concentrations. New Phytol 149:349–355CrossRef Lagrange H, Jay-Allgmand C, Lapeyrie F (2001) Rutin, the phenolglycoside from eucalyptus root exudates, stimulates Pisolithus hyphal growth at picomolar concentrations. New Phytol 149:349–355CrossRef
Zurück zum Zitat Lam HM, Coschigano KT, Oliveira IC, Melo-Oliveira R, Coruzzi GM (1996) The molecular genetics of nitrogen assimilation into amino acids in high plants. Annu Rev Plant Physiol Plant Mol Biol 47:569–593CrossRef Lam HM, Coschigano KT, Oliveira IC, Melo-Oliveira R, Coruzzi GM (1996) The molecular genetics of nitrogen assimilation into amino acids in high plants. Annu Rev Plant Physiol Plant Mol Biol 47:569–593CrossRef
Zurück zum Zitat Lancelle SA, Torrey JG (1985) Early development of rhizobium induced root nodules of Parasponia rigida. I infection and early nodulation. Protoplasm 123:26–37CrossRef Lancelle SA, Torrey JG (1985) Early development of rhizobium induced root nodules of Parasponia rigida. I infection and early nodulation. Protoplasm 123:26–37CrossRef
Zurück zum Zitat Lannucci A, Fragasso M, Beleggia R, Nigro F, Papa R (2017) Evolution of crop rhizosphere: impact of domestication on root exudates in Tetraploid wheat (Triticum turdigum L.). Front Plant Sci 8:2124CrossRef Lannucci A, Fragasso M, Beleggia R, Nigro F, Papa R (2017) Evolution of crop rhizosphere: impact of domestication on root exudates in Tetraploid wheat (Triticum turdigum L.). Front Plant Sci 8:2124CrossRef
Zurück zum Zitat Lavola A, Julkunen-Tiitto R, Roininen H, Aphalo P (1998) Host-plant preference of an insect herbivore mediated by UV-B and CO2 in relation to plant secondary metabolites. Biochem Syst Ecol 26:1e12CrossRef Lavola A, Julkunen-Tiitto R, Roininen H, Aphalo P (1998) Host-plant preference of an insect herbivore mediated by UV-B and CO2 in relation to plant secondary metabolites. Biochem Syst Ecol 26:1e12CrossRef
Zurück zum Zitat Li JZ, Xie Y, Dai AY, Liu LF, Li ZC (2009) Root and shoot traits responses to phosphorus deficiency and QTL analysis at seedling stage using introgression lines of rice. J Genet Genomics 36:173–183CrossRef Li JZ, Xie Y, Dai AY, Liu LF, Li ZC (2009) Root and shoot traits responses to phosphorus deficiency and QTL analysis at seedling stage using introgression lines of rice. J Genet Genomics 36:173–183CrossRef
Zurück zum Zitat Li X, Rui J, Xiong J, Li J, He Z, Zhou J, Yannarell AC, Mackie RI (2014) Functional Potential of Soil Microbial Communities in the Maize Rhizosphere. PLoS One 9(11):e112609CrossRef Li X, Rui J, Xiong J, Li J, He Z, Zhou J, Yannarell AC, Mackie RI (2014) Functional Potential of Soil Microbial Communities in the Maize Rhizosphere. PLoS One 9(11):e112609CrossRef
Zurück zum Zitat Li PC, Chen FJ, Cai HG, Liu JC, Pan QC, Liu ZG, Gu RL, Mi GH, Zhang FS, Yuan LX (2015) A genetic relationship between nitrogen use efficiency and seedling root traits in maize as revealed by QTL analysis. J Exp Bot 66:3175–3188CrossRef Li PC, Chen FJ, Cai HG, Liu JC, Pan QC, Liu ZG, Gu RL, Mi GH, Zhang FS, Yuan LX (2015) A genetic relationship between nitrogen use efficiency and seedling root traits in maize as revealed by QTL analysis. J Exp Bot 66:3175–3188CrossRef
Zurück zum Zitat Liu JQ, Samac DA, Bucciarelli B, Allan DL, Vance CP (2005) Signaling of phosphorus deficiency-induced gene expression in white lupin requires sugar and phloem transport. Plant J 41:257–268CrossRef Liu JQ, Samac DA, Bucciarelli B, Allan DL, Vance CP (2005) Signaling of phosphorus deficiency-induced gene expression in white lupin requires sugar and phloem transport. Plant J 41:257–268CrossRef
Zurück zum Zitat Liu H, Carvalhais LC, Schenk PM, Dennis PG (2016) Effect of Jasmonic acid signalling on wheat micorbiome differ between body sites. Sci Rep 7:41766CrossRef Liu H, Carvalhais LC, Schenk PM, Dennis PG (2016) Effect of Jasmonic acid signalling on wheat micorbiome differ between body sites. Sci Rep 7:41766CrossRef
Zurück zum Zitat Lu H, Murase J, Watanabe A, Sugimoto A, Kimura M (2014) Linking microbial community dynamics to rhizosphere carbon flow in a wetland rice soil. FEMS Microbiol Ecol 48:179–186CrossRef Lu H, Murase J, Watanabe A, Sugimoto A, Kimura M (2014) Linking microbial community dynamics to rhizosphere carbon flow in a wetland rice soil. FEMS Microbiol Ecol 48:179–186CrossRef
Zurück zum Zitat Lugtenberg B, Kamilova F (2009) Plant-growth-promoting rhizobacteria. Annu Rev Microbiol 63:541–556CrossRef Lugtenberg B, Kamilova F (2009) Plant-growth-promoting rhizobacteria. Annu Rev Microbiol 63:541–556CrossRef
Zurück zum Zitat Lundberg DS et al (2012) Defining the core Arabidopsis thaliana root microbiome. Nature 488:86–90CrossRef Lundberg DS et al (2012) Defining the core Arabidopsis thaliana root microbiome. Nature 488:86–90CrossRef
Zurück zum Zitat Lupini A, Princi MP, Araniti F, Miller AJ, Sunseri F, Abenavoli MR (2017) Physiological and molecular responses in tomato under different forms of N nutrition. J Plant Physiol 216:17–25CrossRef Lupini A, Princi MP, Araniti F, Miller AJ, Sunseri F, Abenavoli MR (2017) Physiological and molecular responses in tomato under different forms of N nutrition. J Plant Physiol 216:17–25CrossRef
Zurück zum Zitat Lynch JP (2011) Root phenes for enhanced soil exploration and phosphorus acquisition: tools for future crops. Plant Physiol 156:1041–1049CrossRef Lynch JP (2011) Root phenes for enhanced soil exploration and phosphorus acquisition: tools for future crops. Plant Physiol 156:1041–1049CrossRef
Zurück zum Zitat Lynch JM, Whipps JM (1990) Substrate flow in the rhizosphere. Plant Soil 129:1–10CrossRef Lynch JM, Whipps JM (1990) Substrate flow in the rhizosphere. Plant Soil 129:1–10CrossRef
Zurück zum Zitat Maillet F, Poinsot V, Andre O, Puech-Pages V, Haouy A, Gueunier M, Cromer L, Giraudet D, Formey D, Niebel A, Andres Martinez E, Driguez H, Cecard G, Denarie J (2011) Fungal lipochitooligosaccharide symbiotic signals in arbuscular mycorrhizal. Nature 469:58–64CrossRef Maillet F, Poinsot V, Andre O, Puech-Pages V, Haouy A, Gueunier M, Cromer L, Giraudet D, Formey D, Niebel A, Andres Martinez E, Driguez H, Cecard G, Denarie J (2011) Fungal lipochitooligosaccharide symbiotic signals in arbuscular mycorrhizal. Nature 469:58–64CrossRef
Zurück zum Zitat Marschner H (1995) Mineral Nutrition of Higher Plants. Academic, London Marschner H (1995) Mineral Nutrition of Higher Plants. Academic, London
Zurück zum Zitat Martin BC, Statton J, Siebers AR, Grierson PF, Ryan MH, Kendrick GA (2018a) Colonizing tropical seagrasses increase root exudation under fluctuating and continuous low light. Limnol Oceanogr 63:S381–S391CrossRef Martin BC, Statton J, Siebers AR, Grierson PF, Ryan MH, Kendrick GA (2018a) Colonizing tropical seagrasses increase root exudation under fluctuating and continuous low light. Limnol Oceanogr 63:S381–S391CrossRef
Zurück zum Zitat Martin BC, Glesson D, Statton J, Siebers AR, Grierson PF, Ryan MH, Kendrick GA (2018b) Low light availability alters root exudation and reduces putative beneficial microorganisms in seagrass roots. Front Microbiol 8:2667CrossRef Martin BC, Glesson D, Statton J, Siebers AR, Grierson PF, Ryan MH, Kendrick GA (2018b) Low light availability alters root exudation and reduces putative beneficial microorganisms in seagrass roots. Front Microbiol 8:2667CrossRef
Zurück zum Zitat Massalha H et al (2017) Live imaging of root–bacteria inter-actions in a microfluidics setup. PNAS 114:4549–4554CrossRef Massalha H et al (2017) Live imaging of root–bacteria inter-actions in a microfluidics setup. PNAS 114:4549–4554CrossRef
Zurück zum Zitat McKenzie RH, Roberts TL (1990) Soil, and fertilizers phosphorus update. In: Proceedings of Alberta soil science workshop proceedings, February, 20–22, Edmonton, pp 84–104 McKenzie RH, Roberts TL (1990) Soil, and fertilizers phosphorus update. In: Proceedings of Alberta soil science workshop proceedings, February, 20–22, Edmonton, pp 84–104
Zurück zum Zitat McNear DH Jr (2013) The Rhizosphere- roots, soil and everything in between. Nat Educ Knowl 4:1 McNear DH Jr (2013) The Rhizosphere- roots, soil and everything in between. Nat Educ Knowl 4:1
Zurück zum Zitat Meeks JC, Elhai J (2002) Regulation of cellular differentiation in filamentous cyanobacteria in free-living and plant-associated symbiotic growth states. Microbiol Mol Biol Rev 66:94–121CrossRef Meeks JC, Elhai J (2002) Regulation of cellular differentiation in filamentous cyanobacteria in free-living and plant-associated symbiotic growth states. Microbiol Mol Biol Rev 66:94–121CrossRef
Zurück zum Zitat Meena H, Meena RS (2017) Assessment of sowing environments and bio-regulators as adaptation choice for clusterbean productivity in response to current climatic scenario. Bangladesh J Bot 46(1):241–244 Meena H, Meena RS (2017) Assessment of sowing environments and bio-regulators as adaptation choice for clusterbean productivity in response to current climatic scenario. Bangladesh J Bot 46(1):241–244
Zurück zum Zitat Meena RS, Yadav RS (2015) Yield and profitability of groundnut (Arachis hypogaea L) as influenced by sowing dates and nutrient levels with different varieties. Legum Res 38(6):791–797 Meena RS, Yadav RS (2015) Yield and profitability of groundnut (Arachis hypogaea L) as influenced by sowing dates and nutrient levels with different varieties. Legum Res 38(6):791–797
Zurück zum Zitat Meena RS, Dhakal Y, Bohra JS, Singh SP, Singh MK, Sanodiya P (2015) Influence of bioinorganic combinations on yield, quality and economics of Mungbean. Am J Exp Agric 8(3):159–166 Meena RS, Dhakal Y, Bohra JS, Singh SP, Singh MK, Sanodiya P (2015) Influence of bioinorganic combinations on yield, quality and economics of Mungbean. Am J Exp Agric 8(3):159–166
Zurück zum Zitat Meena RS, Kumar V, Yadav GS, Mitran T (2018) Response and interaction of Bradyrhizobium japonicum and Arbuscular mycorrhizal fungi in the soybean rhizosphere: a review. Plant Growth Regul 84:207–223CrossRef Meena RS, Kumar V, Yadav GS, Mitran T (2018) Response and interaction of Bradyrhizobium japonicum and Arbuscular mycorrhizal fungi in the soybean rhizosphere: a review. Plant Growth Regul 84:207–223CrossRef
Zurück zum Zitat Mehnaz S, Lazarovits G (2006) Inoculation effects of Pseudomonas putida, Gluconacetobacter azotocaptans, and Azospirillum lipoferum on corn plant growth under greenhouse conditions. Microbial Ecol 51:326–335CrossRef Mehnaz S, Lazarovits G (2006) Inoculation effects of Pseudomonas putida, Gluconacetobacter azotocaptans, and Azospirillum lipoferum on corn plant growth under greenhouse conditions. Microbial Ecol 51:326–335CrossRef
Zurück zum Zitat Mlodzinska E, Klobus G, Christensen MD, Fuglsang AT (2015) The plasma membrane H+-ATPase AHA2 contributes to the root architecture in response to different nitrogen supply. Plant Physiol 154:270–282CrossRef Mlodzinska E, Klobus G, Christensen MD, Fuglsang AT (2015) The plasma membrane H+-ATPase AHA2 contributes to the root architecture in response to different nitrogen supply. Plant Physiol 154:270–282CrossRef
Zurück zum Zitat Mus F, Crook MB, Garcia A, Garcia-Costas MK, Geddes BA, Kouri ED, Paramasivan P, Ryu MH, Oldroyd GE, Poole PS, Udvardi MK, Voigt CA, Ané JM, Peters JW (2016) Symbiotic nitrogen fixation and challenges to extending it to non-legumes. Appl Environ Microbiol 82:3698–3710CrossRef Mus F, Crook MB, Garcia A, Garcia-Costas MK, Geddes BA, Kouri ED, Paramasivan P, Ryu MH, Oldroyd GE, Poole PS, Udvardi MK, Voigt CA, Ané JM, Peters JW (2016) Symbiotic nitrogen fixation and challenges to extending it to non-legumes. Appl Environ Microbiol 82:3698–3710CrossRef
Zurück zum Zitat Nardi S, Concheri G, Pizzeghello D, Sturaro A, Rella R, Parvoli G (2000) Soil organic matter mobilization by root exudates. Chemosphere 41:653–658CrossRef Nardi S, Concheri G, Pizzeghello D, Sturaro A, Rella R, Parvoli G (2000) Soil organic matter mobilization by root exudates. Chemosphere 41:653–658CrossRef
Zurück zum Zitat Naveed M, Brown LK, Raffan AC, George TS, Bengough AG, Rosse T, Sinclair I, Koebernick N, Cooper L, Hackett CA, Hallett PD (2017) Plant exudates may stabilize or weaken soil depending on species, origin and time. Eur J Soil Sci 68:806–816CrossRef Naveed M, Brown LK, Raffan AC, George TS, Bengough AG, Rosse T, Sinclair I, Koebernick N, Cooper L, Hackett CA, Hallett PD (2017) Plant exudates may stabilize or weaken soil depending on species, origin and time. Eur J Soil Sci 68:806–816CrossRef
Zurück zum Zitat Nester EW, Gordon MP, Kerr A (2005) Agrobacterium Tumefaciens: from plant pathology to biotechnology. APS Press, St. Paul Nester EW, Gordon MP, Kerr A (2005) Agrobacterium Tumefaciens: from plant pathology to biotechnology. APS Press, St. Paul
Zurück zum Zitat Neumann G, George TS, Plassard C (2009) Strategies and methods for studying the rhizosphere-the plant science toolbox. Plant Soil 321:431–456CrossRef Neumann G, George TS, Plassard C (2009) Strategies and methods for studying the rhizosphere-the plant science toolbox. Plant Soil 321:431–456CrossRef
Zurück zum Zitat Newman EI (1985) The rhizosphere: carbon sources and microbial populations. In: Fitter AH (ed) Ecological interactions in soil. Blackwell Scientific Publications, Oxford, p 107 Newman EI (1985) The rhizosphere: carbon sources and microbial populations. In: Fitter AH (ed) Ecological interactions in soil. Blackwell Scientific Publications, Oxford, p 107
Zurück zum Zitat Oldroyd GED, Downie JA (2008) Coordinating nodule morphogenesis with Rhizobial infection in legumes. Annu Rev Plant Biol 59(1):519–546CrossRef Oldroyd GED, Downie JA (2008) Coordinating nodule morphogenesis with Rhizobial infection in legumes. Annu Rev Plant Biol 59(1):519–546CrossRef
Zurück zum Zitat Oldroyd GED, Murray JD, Poole PS, Downie JA (2011) The rules of engagement in the legume-Rhizobial Symbiosis. Annu Rev Genet 45(1):119–144CrossRef Oldroyd GED, Murray JD, Poole PS, Downie JA (2011) The rules of engagement in the legume-Rhizobial Symbiosis. Annu Rev Genet 45(1):119–144CrossRef
Zurück zum Zitat Parkin TB, Kaspar TC, Cambardella C (2002) Oat plant effects on net nitrogen mineralization. Plant Soil 243:187–195CrossRef Parkin TB, Kaspar TC, Cambardella C (2002) Oat plant effects on net nitrogen mineralization. Plant Soil 243:187–195CrossRef
Zurück zum Zitat Pathan SI, Ceccherini MT, Pietramellara G, Puschenreiter M, Giagnoni L, Arenella M, Varanini Z, Nannipieri P, Renella G (2015a) Enzyme activity and microbial community structure in the rhizosphere of two maize lines differing in N use efficiency. Plant Soil 387:413–424CrossRef Pathan SI, Ceccherini MT, Pietramellara G, Puschenreiter M, Giagnoni L, Arenella M, Varanini Z, Nannipieri P, Renella G (2015a) Enzyme activity and microbial community structure in the rhizosphere of two maize lines differing in N use efficiency. Plant Soil 387:413–424CrossRef
Zurück zum Zitat Pathan SI, Ceccherini MT, Hansen MA, Giagnoni L, Ascher J, Arenella M, Sørensen SJ, Pietramellara G, Nannipieri P, Renella G (2015b) Maize lines with different Nitrogen Use Efficiency (NUE) also differ for molecular diversity of bacterial β-glucosidase gene and glucosidase activity in their rhizosphere. Biol Fertil Soils 51:995–1004CrossRef Pathan SI, Ceccherini MT, Hansen MA, Giagnoni L, Ascher J, Arenella M, Sørensen SJ, Pietramellara G, Nannipieri P, Renella G (2015b) Maize lines with different Nitrogen Use Efficiency (NUE) also differ for molecular diversity of bacterial β-glucosidase gene and glucosidase activity in their rhizosphere. Biol Fertil Soils 51:995–1004CrossRef
Zurück zum Zitat Peiffer JA, Spor A, Koren O, Jin Z, Tringe SG, Dangl JL et al (2013) Diversity and heritability of the maize rhizosphere microbiome under field conditions. PNAS 110:6548–6553CrossRef Peiffer JA, Spor A, Koren O, Jin Z, Tringe SG, Dangl JL et al (2013) Diversity and heritability of the maize rhizosphere microbiome under field conditions. PNAS 110:6548–6553CrossRef
Zurück zum Zitat Pérez-Jaramillo JE, Carrión VJ, Bosse M, Ferrão LFV, de Hollander M, Garcia AAF, Ramírez CA, Mendes R, Raaijmakers JM (2017) Linking rhizosphere microbiome composition of wild and domesticated Phaseolus vulgaris to genotypic and root phenotypic traits. ISME J 10:2244–2257CrossRef Pérez-Jaramillo JE, Carrión VJ, Bosse M, Ferrão LFV, de Hollander M, Garcia AAF, Ramírez CA, Mendes R, Raaijmakers JM (2017) Linking rhizosphere microbiome composition of wild and domesticated Phaseolus vulgaris to genotypic and root phenotypic traits. ISME J 10:2244–2257CrossRef
Zurück zum Zitat Philippot L, Raaijmakers JM, Lemanceau P, van der Putten WH (2013) Going back to the roots: the microbial ecology of the rhizosphere. Nat Rev Microbiol 11:789–799CrossRef Philippot L, Raaijmakers JM, Lemanceau P, van der Putten WH (2013) Going back to the roots: the microbial ecology of the rhizosphere. Nat Rev Microbiol 11:789–799CrossRef
Zurück zum Zitat Podile AR, Kishore GK (2006) Plant growth-promoting rhizobacteria. In: Gnanamanickam SS (ed) Plant-associated Bacteria. Springer, Dordrecht, pp 195–230CrossRef Podile AR, Kishore GK (2006) Plant growth-promoting rhizobacteria. In: Gnanamanickam SS (ed) Plant-associated Bacteria. Springer, Dordrecht, pp 195–230CrossRef
Zurück zum Zitat Pugnaire FI, Armas C, Valladares F (2004) Soil as a mediator in plant-plant interactions in a semi-arid community. J Veg Sci 15:85–92CrossRef Pugnaire FI, Armas C, Valladares F (2004) Soil as a mediator in plant-plant interactions in a semi-arid community. J Veg Sci 15:85–92CrossRef
Zurück zum Zitat Qian JH, Doran JW, Walters DT (1997) Maize plant contributions to the root zone available carbon and microbial transformations of nitrogen. Soil Biol Biochem 29:1451–1462CrossRef Qian JH, Doran JW, Walters DT (1997) Maize plant contributions to the root zone available carbon and microbial transformations of nitrogen. Soil Biol Biochem 29:1451–1462CrossRef
Zurück zum Zitat Quiza L, St-Arnaud M, Yergeau E (2015) Harnessing phyto-microbiome signaling for rhizosphere microbiome engineering. Front Plant Sci 6:507CrossRef Quiza L, St-Arnaud M, Yergeau E (2015) Harnessing phyto-microbiome signaling for rhizosphere microbiome engineering. Front Plant Sci 6:507CrossRef
Zurück zum Zitat Raaijmakers JM, Paulitz TC, Steinberg C, Alabouvette C, Moënne-Loccoz Y (2009) The rhizosphere: a playground and battel filed for soil borne pathogens and beneficial microorganisms. Plant Soil 321:341–361CrossRef Raaijmakers JM, Paulitz TC, Steinberg C, Alabouvette C, Moënne-Loccoz Y (2009) The rhizosphere: a playground and battel filed for soil borne pathogens and beneficial microorganisms. Plant Soil 321:341–361CrossRef
Zurück zum Zitat Rillig MC, Mummey DL (2006) Mycorrhizas and soil structure. New Phytol 171:41–53CrossRef Rillig MC, Mummey DL (2006) Mycorrhizas and soil structure. New Phytol 171:41–53CrossRef
Zurück zum Zitat Rovira AD (1956) Plant root excretions in relation to the rhizosphere effect. I. The nature of root exudate from oats and peas. Plant Soil 7:178–194CrossRef Rovira AD (1956) Plant root excretions in relation to the rhizosphere effect. I. The nature of root exudate from oats and peas. Plant Soil 7:178–194CrossRef
Zurück zum Zitat Rudrappa T et al (2008) Root-secreted malic acid recruits beneficial soil bacteria. Plant Physiol 148:1547–1556CrossRef Rudrappa T et al (2008) Root-secreted malic acid recruits beneficial soil bacteria. Plant Physiol 148:1547–1556CrossRef
Zurück zum Zitat Safari SAA, Rashidi T (2012) The relationship between available P and selected biological properties in the rhizosphere of ten crop species under glasshouse conditions. Span J Soil Sci 2:74–89 Safari SAA, Rashidi T (2012) The relationship between available P and selected biological properties in the rhizosphere of ten crop species under glasshouse conditions. Span J Soil Sci 2:74–89
Zurück zum Zitat Saharan BS, Nehra V (2011) Plant growth promoting rhizobacteria: a critical review. Life Sci Med Res 21:1–30 Saharan BS, Nehra V (2011) Plant growth promoting rhizobacteria: a critical review. Life Sci Med Res 21:1–30
Zurück zum Zitat Saleem M, Law AD, Moe LA (2016) Nicotiana roots recruit rare rhizosphere taxa as major root-inhabiting microbes. Microbial Ecol 71:469–472CrossRef Saleem M, Law AD, Moe LA (2016) Nicotiana roots recruit rare rhizosphere taxa as major root-inhabiting microbes. Microbial Ecol 71:469–472CrossRef
Zurück zum Zitat Scheible WR, Morcuende R, Czechowski T, Fritz C, Osuna D, Palacios-Rojas N, Schindelasch D, Thimm O, Udvardi MK, Stitt M (2004) Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiol 136:2483–2499CrossRef Scheible WR, Morcuende R, Czechowski T, Fritz C, Osuna D, Palacios-Rojas N, Schindelasch D, Thimm O, Udvardi MK, Stitt M (2004) Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiol 136:2483–2499CrossRef
Zurück zum Zitat Selosse MA, Richard F, He X, Simard S (2006) Mycorrhizal networks: les liaisons dangerousness. Trends Ecol Evol 11:621–628CrossRef Selosse MA, Richard F, He X, Simard S (2006) Mycorrhizal networks: les liaisons dangerousness. Trends Ecol Evol 11:621–628CrossRef
Zurück zum Zitat Shen J, Li C, Mi G, Ki L, Yuan L, Jiang R, Zhang F (2013) Maximizing root/rhizosphere efficiency to improve crop productivity and nutrient use efficiency in intensive agriculture of China. J Exp Bot 64:1181–1192CrossRef Shen J, Li C, Mi G, Ki L, Yuan L, Jiang R, Zhang F (2013) Maximizing root/rhizosphere efficiency to improve crop productivity and nutrient use efficiency in intensive agriculture of China. J Exp Bot 64:1181–1192CrossRef
Zurück zum Zitat Shenton M, Iwamato C, Kureta N, Ikeo K (2016) Effect of wild and cultivated rice genotypes on rhizosphere bacterial community composition. Rice 9:42CrossRef Shenton M, Iwamato C, Kureta N, Ikeo K (2016) Effect of wild and cultivated rice genotypes on rhizosphere bacterial community composition. Rice 9:42CrossRef
Zurück zum Zitat Shukla KP, Sharma S, Singh NK, Singh V, Tiwari K, Singh S (2011) Nature and role of root exudates: efficacy in bioremediation. Afr J Biotechnol 10:9717–9724 Shukla KP, Sharma S, Singh NK, Singh V, Tiwari K, Singh S (2011) Nature and role of root exudates: efficacy in bioremediation. Afr J Biotechnol 10:9717–9724
Zurück zum Zitat Sihag SK, Singh MK, Meena RS, Naga S, Bahadur SR, Gaurav YRS (2015) Influences of spacing on growth and yield potential of dry direct seeded rice (Oryza sativa L.) cultivars. Ecoscan 9(1–2):517–519 Sihag SK, Singh MK, Meena RS, Naga S, Bahadur SR, Gaurav YRS (2015) Influences of spacing on growth and yield potential of dry direct seeded rice (Oryza sativa L.) cultivars. Ecoscan 9(1–2):517–519
Zurück zum Zitat Singh BK, Millard P, Whiteley AS, Murrell JC (2004) Unravelling rhizosphere– microbial interactions: opportunities and limitations. Trends Microbiol 12:386–393CrossRef Singh BK, Millard P, Whiteley AS, Murrell JC (2004) Unravelling rhizosphere– microbial interactions: opportunities and limitations. Trends Microbiol 12:386–393CrossRef
Zurück zum Zitat Smalla K, Wieland G, Buchner A, Zock A, Parzy J, Kaiser S, Roskot R, Heuer H, Berg G (2001) Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Appl Environ Microbiol 67:4742–4751CrossRef Smalla K, Wieland G, Buchner A, Zock A, Parzy J, Kaiser S, Roskot R, Heuer H, Berg G (2001) Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Appl Environ Microbiol 67:4742–4751CrossRef
Zurück zum Zitat Song F, Han X, Zhu X, Herbert S (2012) Response to water stress of soil enzymes and root exudates from drought and non-drought tolerant corn hybrids at different growth stages. Can J Soil Sci 92:501–507CrossRef Song F, Han X, Zhu X, Herbert S (2012) Response to water stress of soil enzymes and root exudates from drought and non-drought tolerant corn hybrids at different growth stages. Can J Soil Sci 92:501–507CrossRef
Zurück zum Zitat Stitt M (1999) Nitrate regulation of metabolism and growth. Curr Opin Plant Biol 2:178–186CrossRef Stitt M (1999) Nitrate regulation of metabolism and growth. Curr Opin Plant Biol 2:178–186CrossRef
Zurück zum Zitat Stoltz E, Greger M (2002) Cotton grass effects of trace elements in submersed mine tailings. J Environ Qual 31:1477–1483CrossRef Stoltz E, Greger M (2002) Cotton grass effects of trace elements in submersed mine tailings. J Environ Qual 31:1477–1483CrossRef
Zurück zum Zitat Subbarao GV, Sahrawat KL, Nakahara K, Rao IM, Ishitani M, Hash CT, Kishii M, Bonnett DG, Berry WL, Lata JC (2013) A paradigm shifts towards low-nitrifying production systems: the role of biological nitrification inhibition (BNI). Ann Bot 112:297–316CrossRef Subbarao GV, Sahrawat KL, Nakahara K, Rao IM, Ishitani M, Hash CT, Kishii M, Bonnett DG, Berry WL, Lata JC (2013) A paradigm shifts towards low-nitrifying production systems: the role of biological nitrification inhibition (BNI). Ann Bot 112:297–316CrossRef
Zurück zum Zitat Sytsma KJ, Morawetz J, Pires JC, Nepokroeff M, Conti E, Zjhra M, Hall JC, Chase MW (2002) Urticalean rosids: circumscription, rosid ancestry, and phylogenetics based on rbcL, trnL-F, and ndhF sequences. Am J Bot 89:1531–1546CrossRef Sytsma KJ, Morawetz J, Pires JC, Nepokroeff M, Conti E, Zjhra M, Hall JC, Chase MW (2002) Urticalean rosids: circumscription, rosid ancestry, and phylogenetics based on rbcL, trnL-F, and ndhF sequences. Am J Bot 89:1531–1546CrossRef
Zurück zum Zitat Tak HI, Ahmad F, Babalola OO (2013) Advances in the application of plant growth-promoting rhizobacteria in phytoremediation of heavy metals. In: Whitacre DM (ed) Reviews of environmental contamination and toxicology, vol 223. Springer, New York, pp 33–52 Tak HI, Ahmad F, Babalola OO (2013) Advances in the application of plant growth-promoting rhizobacteria in phytoremediation of heavy metals. In: Whitacre DM (ed) Reviews of environmental contamination and toxicology, vol 223. Springer, New York, pp 33–52
Zurück zum Zitat Thomas Danhorn, Clay Fuqua, (2007) Biofilm Formation by Plant-Associated Bacteria. Annual Review of Microbiology 61 (1):401-422CrossRef Thomas Danhorn, Clay Fuqua, (2007) Biofilm Formation by Plant-Associated Bacteria. Annual Review of Microbiology 61 (1):401-422CrossRef
Zurück zum Zitat Tharayil N, Triebwasser DJ (2010) Elucidation of a diurnal pattern of catechin exudation by Centaurea stoebe. J Chem Ecol 36:200–204CrossRef Tharayil N, Triebwasser DJ (2010) Elucidation of a diurnal pattern of catechin exudation by Centaurea stoebe. J Chem Ecol 36:200–204CrossRef
Zurück zum Zitat Ueno D, Rombola AD, Iwashita T, Nomoto K, Ma JF (2007) Identification of two novel phytosiderophores secreted by perennial grasses. New Phytol 174:304–310CrossRef Ueno D, Rombola AD, Iwashita T, Nomoto K, Ma JF (2007) Identification of two novel phytosiderophores secreted by perennial grasses. New Phytol 174:304–310CrossRef
Zurück zum Zitat Uren NC (2000) Types, amounts, and possible functions of compounds released into the rhizosphere by soil-grown plants. In: Pinto R, Varanini Z, Nannipieri P (eds) The rhizosphere: biochemistry and organic substances at the soil-plant interface. Marcel Dekker, New York, pp 19–40 Uren NC (2000) Types, amounts, and possible functions of compounds released into the rhizosphere by soil-grown plants. In: Pinto R, Varanini Z, Nannipieri P (eds) The rhizosphere: biochemistry and organic substances at the soil-plant interface. Marcel Dekker, New York, pp 19–40
Zurück zum Zitat Vaartaja O (1975) Pythium sylvaticum in Canadian forest nurseries. Can Plant Dis Surv 55:101–102 Vaartaja O (1975) Pythium sylvaticum in Canadian forest nurseries. Can Plant Dis Surv 55:101–102
Zurück zum Zitat Vacheron J, Desbrosses G, Bouffaud ML, Touraine B, Moënne-Loccoz Y, Muller D, Legendre L, Wisniewski-Dyé F, Prigent-Combaret C (2013) Plant growth-promoting rhizobacteria and root system functioning. Front Plant Sci 4:356CrossRef Vacheron J, Desbrosses G, Bouffaud ML, Touraine B, Moënne-Loccoz Y, Muller D, Legendre L, Wisniewski-Dyé F, Prigent-Combaret C (2013) Plant growth-promoting rhizobacteria and root system functioning. Front Plant Sci 4:356CrossRef
Zurück zum Zitat Van Loon LC (2007) Plant responses to plant growth-promoting rhizobacteria. Eur J Plant Pathol 119:243–254CrossRef Van Loon LC (2007) Plant responses to plant growth-promoting rhizobacteria. Eur J Plant Pathol 119:243–254CrossRef
Zurück zum Zitat Van Loon LC, Bakker PAHM, Pieterse CMJ (1998) Systemic resistance induced by rhizosphere bacteria. Annu Rev Phytopathol 36:453–483CrossRef Van Loon LC, Bakker PAHM, Pieterse CMJ (1998) Systemic resistance induced by rhizosphere bacteria. Annu Rev Phytopathol 36:453–483CrossRef
Zurück zum Zitat Varma D, Meena RS, Kumar S (2017) Response of mungbean to fertility and lime levels under soil acidity in an alley cropping system in Vindhyan Region, India. Int J Chem Stud 5(2):384–389 Varma D, Meena RS, Kumar S (2017) Response of mungbean to fertility and lime levels under soil acidity in an alley cropping system in Vindhyan Region, India. Int J Chem Stud 5(2):384–389
Zurück zum Zitat Verma JP, Meena VS, Kumar A, Meena RS (2015) Issues and challenges about sustainable agriculture production for management of natural resources to sustain soil fertility and health: a book review. J Clean Prod 107:793–794CrossRef Verma JP, Meena VS, Kumar A, Meena RS (2015) Issues and challenges about sustainable agriculture production for management of natural resources to sustain soil fertility and health: a book review. J Clean Prod 107:793–794CrossRef
Zurück zum Zitat Vidal EA, Gutiérrez RA (2008) A systems view of nitrogen nutrient and metabolite responses in Arabidopsis. Curr Opin Plant Biol 11:521–529CrossRef Vidal EA, Gutiérrez RA (2008) A systems view of nitrogen nutrient and metabolite responses in Arabidopsis. Curr Opin Plant Biol 11:521–529CrossRef
Zurück zum Zitat Viveros OM, Jorquera MA, Crowley DE, Gajardo G, Mora ML (2010) Mechanism and practical considerations involved in plant growth promotion by rhizobacteria. J Soil Sci Plant Nutr 10:293–319 Viveros OM, Jorquera MA, Crowley DE, Gajardo G, Mora ML (2010) Mechanism and practical considerations involved in plant growth promotion by rhizobacteria. J Soil Sci Plant Nutr 10:293–319
Zurück zum Zitat Walker TS, Bais HP, Grotewold E, Vivanco JM (2003) Root exudation and rhizosphere biology. Plant Physiol 132:44–51CrossRef Walker TS, Bais HP, Grotewold E, Vivanco JM (2003) Root exudation and rhizosphere biology. Plant Physiol 132:44–51CrossRef
Zurück zum Zitat Wang R, Tischner R, Gutierrez RA, Hoffman M, Xing X, Chen M, Coruzzi GM, Crawford NM (2004) Genomic analysis of the nitrate response using a nitrate reductase-null mutant of Arabidopsis. Plant Physiol 136:2512–2522CrossRef Wang R, Tischner R, Gutierrez RA, Hoffman M, Xing X, Chen M, Coruzzi GM, Crawford NM (2004) Genomic analysis of the nitrate response using a nitrate reductase-null mutant of Arabidopsis. Plant Physiol 136:2512–2522CrossRef
Zurück zum Zitat Wang AS, Angle JS, Chaney RL, Delorme TA, Reeves RD (2006) Soil pH effects on uptake of Cd and Zn by Thlaspi caerulescens. Plant Soil 281:325–337CrossRef Wang AS, Angle JS, Chaney RL, Delorme TA, Reeves RD (2006) Soil pH effects on uptake of Cd and Zn by Thlaspi caerulescens. Plant Soil 281:325–337CrossRef
Zurück zum Zitat Wang XR, Pan QA, Chen FX, Yan XL, Liao H (2011) Effects of coinoculation with arbuscular mycorrhizal fungi and rhizobia on soybean growth as related to root architecture and availability of N and P. Mycorrhiza 21:173–181CrossRef Wang XR, Pan QA, Chen FX, Yan XL, Liao H (2011) Effects of coinoculation with arbuscular mycorrhizal fungi and rhizobia on soybean growth as related to root architecture and availability of N and P. Mycorrhiza 21:173–181CrossRef
Zurück zum Zitat Wang ZH, Fang H, Chen M (2017) Effects of root exudates of woody species on the soil anti-erodibility in the rhizosphere in a karst region. China Peer J 5:e3029CrossRef Wang ZH, Fang H, Chen M (2017) Effects of root exudates of woody species on the soil anti-erodibility in the rhizosphere in a karst region. China Peer J 5:e3029CrossRef
Zurück zum Zitat Weiland J, Littke W, Haase D (2013) Forest nurseries face critical choices with the loss of methyl bromide fumigation. Calif Agric 67:153–161CrossRef Weiland J, Littke W, Haase D (2013) Forest nurseries face critical choices with the loss of methyl bromide fumigation. Calif Agric 67:153–161CrossRef
Zurück zum Zitat Wu P, Wang X (2008) Role of OsPHR2 on phosphorus homeostasis and root hairs development in rice (Oryza sativa L.). Plant Signal Behav 3:674–675CrossRef Wu P, Wang X (2008) Role of OsPHR2 on phosphorus homeostasis and root hairs development in rice (Oryza sativa L.). Plant Signal Behav 3:674–675CrossRef
Zurück zum Zitat Wu QS, Zou YN, Liu CY, Lu T (2012) Interacted effect of arbuscular mycorrhizal fungi and polyamines on root system architecture of citrus seedlings. J Integr Agric 11:1675–1681CrossRef Wu QS, Zou YN, Liu CY, Lu T (2012) Interacted effect of arbuscular mycorrhizal fungi and polyamines on root system architecture of citrus seedlings. J Integr Agric 11:1675–1681CrossRef
Zurück zum Zitat Xu G, Fan X, Miller AJ (2012) Plant nitrogen assimilation and use efficiency. Annu Rev Plant Biol 63:153–182CrossRef Xu G, Fan X, Miller AJ (2012) Plant nitrogen assimilation and use efficiency. Annu Rev Plant Biol 63:153–182CrossRef
Zurück zum Zitat Yadav GS, Lal R, Meena RS, Datta M, Babu S, Das LJ, Saha P (2017) Energy budgeting for designing sustainable and environmentally clean/safer cropping systems for rainfed rice fallow lands in India. J Clean Prod 158:29–37CrossRef Yadav GS, Lal R, Meena RS, Datta M, Babu S, Das LJ, Saha P (2017) Energy budgeting for designing sustainable and environmentally clean/safer cropping systems for rainfed rice fallow lands in India. J Clean Prod 158:29–37CrossRef
Zurück zum Zitat Yadav GS, Das A, Lal R, Babu S, Meena RS, Saha P, Singh R, Datta M (2018) Energy budget and carbon footprint in a no-till and mulch based rice–mustard cropping system. J Clean Prod 191:144–157CrossRef Yadav GS, Das A, Lal R, Babu S, Meena RS, Saha P, Singh R, Datta M (2018) Energy budget and carbon footprint in a no-till and mulch based rice–mustard cropping system. J Clean Prod 191:144–157CrossRef
Zurück zum Zitat Yang L (2016) Root exudation pattern of sugar beet (Beta vulgaris L.) as influenced by light intensity and P deficiency. PhD dissertation, University Göttingen Yang L (2016) Root exudation pattern of sugar beet (Beta vulgaris L.) as influenced by light intensity and P deficiency. PhD dissertation, University Göttingen
Zurück zum Zitat Young IM (1995) Variation in moisture contents between bulk soil and the rhizosheath of Triticum aestivum L. cv. New Phytol 130:135–139CrossRef Young IM (1995) Variation in moisture contents between bulk soil and the rhizosheath of Triticum aestivum L. cv. New Phytol 130:135–139CrossRef
Zurück zum Zitat Zaidi A, Khan MS, Ahemad M, Oves M (2009) Plant growth promotion by phosphate solubilizing bacteria. Acta Microbiol Immunol Hung 56:263–284CrossRef Zaidi A, Khan MS, Ahemad M, Oves M (2009) Plant growth promotion by phosphate solubilizing bacteria. Acta Microbiol Immunol Hung 56:263–284CrossRef
Zurück zum Zitat Zhang FS, Shen JB, Zhang JL, Zuo YM, Li L, Chen XP (2010) Rhizosphere processes and management for improving nutrient use efficiency and crop productivity: implications for China. In: Sparks DL (ed) Advances in agronomy, vol 107. Academic, San Diego, pp 1–32 Zhang FS, Shen JB, Zhang JL, Zuo YM, Li L, Chen XP (2010) Rhizosphere processes and management for improving nutrient use efficiency and crop productivity: implications for China. In: Sparks DL (ed) Advances in agronomy, vol 107. Academic, San Diego, pp 1–32
Zurück zum Zitat Zhang R, Vivanco JM, Shen Q (2017) The unseen rhizosphere root-soil-microbe interaction for crop production. Curr Opin Microbiol 37:8–14CrossRef Zhang R, Vivanco JM, Shen Q (2017) The unseen rhizosphere root-soil-microbe interaction for crop production. Curr Opin Microbiol 37:8–14CrossRef
Zurück zum Zitat Zhuang X, Chen J, Shim H, Bai Z (2007) New advances in plant growth promoting rhizobacteria for bioremediation. Environ Int 33:406–413CrossRef Zhuang X, Chen J, Shim H, Bai Z (2007) New advances in plant growth promoting rhizobacteria for bioremediation. Environ Int 33:406–413CrossRef
Metadaten
Titel
Rhizosphere as Hotspot for Plant-Soil-Microbe Interaction
verfasst von
Shamina Imran Pathan
Maria Teresa Ceccherini
Francesco Sunseri
Antonio Lupini
Copyright-Jahr
2020
Verlag
Springer Singapore
DOI
https://doi.org/10.1007/978-981-13-7264-3_2