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2014 | OriginalPaper | Chapter

A Novel Riemannian Metric for Geodesic Tractography in DTI

Authors : Andrea Fuster, Antonio Tristan-Vega, Tom Dela Haije, Carl-Fredrik Westin, Luc Florack

Published in: Computational Diffusion MRI and Brain Connectivity

Publisher: Springer International Publishing

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Abstract

One of the approaches in diffusion tensor imaging is to consider a Riemannian metric given by the inverse diffusion tensor. Such a metric is used for white matter tractography and connectivity analysis. We propose a modified metric tensor given by the adjugate rather than the inverse diffusion tensor. Tractography experiments on real brain diffusion data show improvement in the vicinity of isotropic diffusion regions compared to results for inverse (sharpened) diffusion tensors.

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Footnotes
1
Classification of geodesics as fibres requires additional connectivity measures [1, 16].
 
2
We use Einstein’s summation convention: \(a_{i}{b}^{i}\stackrel{\mbox{ def}}{=}\sum \limits _{i}a_{i}{b}^{i}\).
 
3
Here we consider the shortest geodesic between any given pair of points to be optimal.
 
Literature
1.
go back to reference Astola, L., Florack, L., ter Haar Romeny, B.M.: Measures for pathway analysis in brain white matter using diffusion tensor images. In: Karssemeijer, N., Lelieveldt, B.P.F. (eds.) Proceedings of the IPMI 2007, Kerkrade. Lecture Notes in Computer Science, vol. 4584, pp. 642–649. Springer (2007) Astola, L., Florack, L., ter Haar Romeny, B.M.: Measures for pathway analysis in brain white matter using diffusion tensor images. In: Karssemeijer, N., Lelieveldt, B.P.F. (eds.) Proceedings of the IPMI 2007, Kerkrade. Lecture Notes in Computer Science, vol. 4584, pp. 642–649. Springer (2007)
2.
go back to reference Astola, L., Fuster, A., Florack, L.: A Riemannian scalar measure for diffusion tensor images. Pattern Recognit. 44(9), 1885–1891 (2011)CrossRef Astola, L., Fuster, A., Florack, L.: A Riemannian scalar measure for diffusion tensor images. Pattern Recognit. 44(9), 1885–1891 (2011)CrossRef
3.
go back to reference Basser, P.J., Mattiello, J., Le Bihan, D.: Estimation of the effective self-diffusion tensor from the NMR spin echo. J. Magn. Reson. 103, 247–254 (1994)CrossRef Basser, P.J., Mattiello, J., Le Bihan, D.: Estimation of the effective self-diffusion tensor from the NMR spin echo. J. Magn. Reson. 103, 247–254 (1994)CrossRef
5.
go back to reference Descoteaux, M., Deriche, R., Lenglet, C.: Diffusion tensor sharpening improves white matter tractography. In: SPIE Image Processing: Medical Imaging, San Diego, pp. 1084–1087 (2007) Descoteaux, M., Deriche, R., Lenglet, C.: Diffusion tensor sharpening improves white matter tractography. In: SPIE Image Processing: Medical Imaging, San Diego, pp. 1084–1087 (2007)
6.
go back to reference Fletcher, P.T., Joshi, S.: Riemannian geometry for the statistical analysis of diffusion tensor data. Signal Process. 87(2), 250–262 (2007)CrossRefMATH Fletcher, P.T., Joshi, S.: Riemannian geometry for the statistical analysis of diffusion tensor data. Signal Process. 87(2), 250–262 (2007)CrossRefMATH
7.
go back to reference Fletcher, P.T., Tao, R., Jeong, K.W., Whitaker, R.T.: A volumetric approach to quantifying region-to-region white matter connectivity in diffusion tensor MRI. In: Karssemeijer, N., Lelieveldt, B.P.F. (eds.) Proceedings of the IPMI 2007, Kerkrade. Lecture Notes in Computer Science, vol. 4584, pp. 346–358. Springer (2007) Fletcher, P.T., Tao, R., Jeong, K.W., Whitaker, R.T.: A volumetric approach to quantifying region-to-region white matter connectivity in diffusion tensor MRI. In: Karssemeijer, N., Lelieveldt, B.P.F. (eds.) Proceedings of the IPMI 2007, Kerkrade. Lecture Notes in Computer Science, vol. 4584, pp. 346–358. Springer (2007)
8.
go back to reference Hao, X., Whitaker, R.T., Fletcher, P.T.: Adaptive Riemannian metrics for improved geodesic tracking of white matter. In: Székely, G., Hahn, H.K. (eds.) Proceedings of the IPMI 2011, Kloster Irsee. Lecture Notes in Computer Science, vol. 6801, pp. 13–24. Springer, Berlin (2011) Hao, X., Whitaker, R.T., Fletcher, P.T.: Adaptive Riemannian metrics for improved geodesic tracking of white matter. In: Székely, G., Hahn, H.K. (eds.) Proceedings of the IPMI 2011, Kloster Irsee. Lecture Notes in Computer Science, vol. 6801, pp. 13–24. Springer, Berlin (2011)
10.
go back to reference Lazar, M., Weinstein, D.M., Tsuruda, J.S., Hasan, K.M., Arfanakis, K., Meyerand, M.E., Badie, B., Rowley, H.A., Haughton, V., Field, A., Alexander, A.L.: White matter tractography using diffusion tensor deflection. Hum. Brain Mapp. 18(4), 306–321 (2003). doi:10.1002/hbm.10102. http://dx.doi.org/10.1002/hbm.10102 Lazar, M., Weinstein, D.M., Tsuruda, J.S., Hasan, K.M., Arfanakis, K., Meyerand, M.E., Badie, B., Rowley, H.A., Haughton, V., Field, A., Alexander, A.L.: White matter tractography using diffusion tensor deflection. Hum. Brain Mapp. 18(4), 306–321 (2003). doi:10.1002/hbm.10102. http://​dx.​doi.​org/​10.​1002/​hbm.​10102
11.
go back to reference Lenglet, C., Deriche, R., Faugeras, O.: Inferring white matter geometry from diffusion tensor MRI: application to connectivity mapping. In: Pajdla, T., Matas, J. (eds.) Proceedings of the 8th European Conference on Computer Vision, Prague, May 2004. Lecture Notes in Computer Science, vol. 3021–3024, pp. 127–140. Springer, Berlin (2004) Lenglet, C., Deriche, R., Faugeras, O.: Inferring white matter geometry from diffusion tensor MRI: application to connectivity mapping. In: Pajdla, T., Matas, J. (eds.) Proceedings of the 8th European Conference on Computer Vision, Prague, May 2004. Lecture Notes in Computer Science, vol. 3021–3024, pp. 127–140. Springer, Berlin (2004)
12.
go back to reference Melonakos, J., Pichon, E., Angenent, S., Tannenbaum, A.: Finsler active contours. IEEE Trans. Pattern Anal. Mach. Intell. 30(3), 412–423 (2008)CrossRef Melonakos, J., Pichon, E., Angenent, S., Tannenbaum, A.: Finsler active contours. IEEE Trans. Pattern Anal. Mach. Intell. 30(3), 412–423 (2008)CrossRef
13.
go back to reference O’Donnell, L., Haker, S., Westin, C.F.: New approaches to estimation of white matter connectivity in diffusion tensor MRI: elliptic PDEs and geodesics in a tensor-warped space. In: Proceedings of Medical Imaging, Computing and Computer Assisted Intervention, Tokyo. Lecture Notes in Computer Science, vol. 2488, pp. 459–466. Springer (2002) O’Donnell, L., Haker, S., Westin, C.F.: New approaches to estimation of white matter connectivity in diffusion tensor MRI: elliptic PDEs and geodesics in a tensor-warped space. In: Proceedings of Medical Imaging, Computing and Computer Assisted Intervention, Tokyo. Lecture Notes in Computer Science, vol. 2488, pp. 459–466. Springer (2002)
14.
go back to reference Pennec, X., Fillard, P., Ayache, N.: A Riemannian framework for tensor computing. Int. J. Comput. Vis. 66(1), 41–66 (2006)CrossRefMathSciNet Pennec, X., Fillard, P., Ayache, N.: A Riemannian framework for tensor computing. Int. J. Comput. Vis. 66(1), 41–66 (2006)CrossRefMathSciNet
15.
go back to reference Pieper, S., Halle, M., Kikinis, R.: 3D Slicer. In: IEEE International Symposium on Biomedical Imaging ISBI 2004, Arlington, pp. 632–635 (2004) Pieper, S., Halle, M., Kikinis, R.: 3D Slicer. In: IEEE International Symposium on Biomedical Imaging ISBI 2004, Arlington, pp. 632–635 (2004)
16.
go back to reference Prados, E., Soatto, S., Lenglet, C., Pons, J.P., Wotawa, N., Deriche, R., Faugeras, O.: Control theory and fast marching techniques for brain connectivity mapping. In: Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, New York, June 2006, vol. 1, pp. 1076–1083. IEEE Computer Society (2006) Prados, E., Soatto, S., Lenglet, C., Pons, J.P., Wotawa, N., Deriche, R., Faugeras, O.: Control theory and fast marching techniques for brain connectivity mapping. In: Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, New York, June 2006, vol. 1, pp. 1076–1083. IEEE Computer Society (2006)
Metadata
Title
A Novel Riemannian Metric for Geodesic Tractography in DTI
Authors
Andrea Fuster
Antonio Tristan-Vega
Tom Dela Haije
Carl-Fredrik Westin
Luc Florack
Copyright Year
2014
DOI
https://doi.org/10.1007/978-3-319-02475-2_9

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