Skip to main content
Top

2024 | OriginalPaper | Chapter

Abstract: Comprehensive Multi-domain Dataset for Mitotic Figure Detection

Authors : Marc Aubreville, Frauke Wilm, Nikolas Stathonikos, Katharina Breininger, Taryn A. Donovan, Samir Jabari, Robert Klopfleisch, Mitko Veta, Jonathan Ganz, Jonas Ammeling, Paul J. van Diest, Christof A. Bertram

Published in: Bildverarbeitung für die Medizin 2024

Publisher: Springer Fachmedien Wiesbaden

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

The density of mitotic figures is a well-established diagnostic marker for tumor malignancy across many tumor types and species. At the same time, the identification of mitotic figures in hematoxylin and eosin-stained tissue slices is known to have a high inter-rater variability, reducing its reproducibility. Hence, mitotic figure identification in tumor tissue is a task worth automating using deep learning models. Additionally, there is high variability in tissue across labs, tumor types, and scanning devices, which leads to a covariant domain shift responsible for reducing the performance of many models. To provide a data foundation for the investigation of robustness and training of robust mitotic figure recognition models alike, we introduced the MIDOG++ dataset [1]. The dataset builds on the training data sets of the MIDOG 2021 and 2022 MICCAI challenges and extends them by two additional tumor types. In total, the dataset features regions of interest with a size of 2mm2 from 503 histological specimens across seven different tumor types (breast carcinoma, lung carcinoma, lymphosarcoma, neuroendocrine tumor, cutaneous mast cell tumor, cutaneous melanoma, and (sub)cutaneous soft tissue sarcoma). The annotation database, created from a consensus of three pathologists, aided by a machine learning algorithm to reduce the risk of missing mitotic figures, contains in total 11,937 mitotic figures. In our paper, we have demonstrated that there is a considerable domain gap between individual domains, but also that a combination of multiple domains yields robust mitotic figure detectors across tumor types and scanners.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Metadata
Title
Abstract: Comprehensive Multi-domain Dataset for Mitotic Figure Detection
Authors
Marc Aubreville
Frauke Wilm
Nikolas Stathonikos
Katharina Breininger
Taryn A. Donovan
Samir Jabari
Robert Klopfleisch
Mitko Veta
Jonathan Ganz
Jonas Ammeling
Paul J. van Diest
Christof A. Bertram
Copyright Year
2024
DOI
https://doi.org/10.1007/978-3-658-44037-4_40

Premium Partner