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2017 | OriginalPaper | Chapter

Enhancing Grammatical Evolution Through Data Augmentation: Application to Blood Glucose Forecasting

Authors : Jose Manuel Velasco, Oscar Garnica, Sergio Contador, Jose Manuel Colmenar, Esther Maqueda, Marta Botella, Juan Lanchares, J. Ignacio Hidalgo

Published in: Applications of Evolutionary Computation

Publisher: Springer International Publishing

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Abstract

Currently, Diabetes Mellitus Type 1 patients are waiting hopefully for the arrival of the Artificial Pancreas (AP) in a near future. AP systems will control the blood glucose of people that suffer the disease, improving their lives and reducing the risks they face everyday. At the core of the AP, an algorithm will forecast future glucose levels and estimate insulin bolus sizes. Grammatical Evolution (GE) has been proved as a suitable algorithm for predicting glucose levels. Nevertheless, one the main obstacles that researches have found for training the GE models is the lack of significant amounts of data. As in many other fields in medicine, the collection of data from real patients is very complex. In this paper, we propose a data augmentation algorithm that generates synthetic glucose time series from real data. The synthetic time series can be used to train a unique GE model or to produce several GE models that work together in a combining system. Our experimental results show that, in a scarce data context, Grammatical Evolution models can get more accurate and robust predictions using data augmentation.

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Footnotes
1
On 6 June 2012, the Clinical Research Ethics Committee of the Hospital of Alcalá de Henares (Spain) authorized the use of the data collected, provided that the privacy of the data is ensured and the informed consent of patients is made.
 
Literature
1.
go back to reference Krinsley, J.S., Jones, R.L.: Cost analysis of intensive glycemic control in critically ill adult patients. Chest 129(3), 644–650 (2006)CrossRef Krinsley, J.S., Jones, R.L.: Cost analysis of intensive glycemic control in critically ill adult patients. Chest 129(3), 644–650 (2006)CrossRef
2.
go back to reference Nicolao, G.D., Magni, L., Man, C.D., Cobelli, C.: Modeling and control of diabetes: towards the artificial pancreas. In: 18th IFAC World Congress of the IFAC Proceedings Volumes, vol. 44, no. 1, pp. 7092–7101 (2011) Nicolao, G.D., Magni, L., Man, C.D., Cobelli, C.: Modeling and control of diabetes: towards the artificial pancreas. In: 18th IFAC World Congress of the IFAC Proceedings Volumes, vol. 44, no. 1, pp. 7092–7101 (2011)
4.
go back to reference Tanner, M.A., Wong, W.H.: From EM to data augmentation: the emergence of MCMC Bayesian computation in the 1980s, April 2011. arXiv e-prints arXiv:1104.2210 Tanner, M.A., Wong, W.H.: From EM to data augmentation: the emergence of MCMC Bayesian computation in the 1980s, April 2011. arXiv e-prints arXiv:​1104.​2210
5.
go back to reference Yadav, M., Malhotra, P., Vig, L., Sriram, K., Shroff, G.: ODE - augmented training improves anomaly detection in sensor data from machines. CoRR (2016). arXiv:1605.01534 Yadav, M., Malhotra, P., Vig, L., Sriram, K., Shroff, G.: ODE - augmented training improves anomaly detection in sensor data from machines. CoRR (2016). arXiv:​1605.​01534
6.
go back to reference Kumar, A., Cowen, L.: Augmented training of hidden Markov models to recognize remote homologs via simulated evolution. Bioinformatics 25(13), 1602–1608 (2009)CrossRef Kumar, A., Cowen, L.: Augmented training of hidden Markov models to recognize remote homologs via simulated evolution. Bioinformatics 25(13), 1602–1608 (2009)CrossRef
7.
go back to reference Mays, L.: Diabetes mellitus standards of care. Nurs. Clin. North Am. 50(4), 703–711 (2015). Pathophysiology and Care Protocols for Nursing ManagementCrossRef Mays, L.: Diabetes mellitus standards of care. Nurs. Clin. North Am. 50(4), 703–711 (2015). Pathophysiology and Care Protocols for Nursing ManagementCrossRef
9.
go back to reference Kastorini, C.-M., Papadakis, G., Milionis, H.J., Kalantzi, K., Puddu, P.-E., Nikolaou, V., Vemmos, K.N., Goudevenos, J.A., Panagiotakos, D.B.: Comparative analysis of a-priori and a-posteriori dietary patterns using state-of-the-art classification algorithms: a case/case-control study. Artif. Intell. Med. 59(3), 175–183 (2013)CrossRef Kastorini, C.-M., Papadakis, G., Milionis, H.J., Kalantzi, K., Puddu, P.-E., Nikolaou, V., Vemmos, K.N., Goudevenos, J.A., Panagiotakos, D.B.: Comparative analysis of a-priori and a-posteriori dietary patterns using state-of-the-art classification algorithms: a case/case-control study. Artif. Intell. Med. 59(3), 175–183 (2013)CrossRef
10.
go back to reference Hidalgo, J.I., Maqueda, E., Risco-Martín, J.L., Cuesta-Infante, A., Colmenar, J.M., Nobel, J.: GlUCmodel: a monitoring and modeling system for chronic diseases applied to diabetes. J. Biomed. Inform. 48, 183–192 (2014)CrossRef Hidalgo, J.I., Maqueda, E., Risco-Martín, J.L., Cuesta-Infante, A., Colmenar, J.M., Nobel, J.: GlUCmodel: a monitoring and modeling system for chronic diseases applied to diabetes. J. Biomed. Inform. 48, 183–192 (2014)CrossRef
11.
go back to reference Yu, C., Zhao, C.: Rapid model identification for online glucose prediction of new subjects with type 1 diabetes using model migration method. In: IFAC World Congress of the IFAC Proceedings Volumes, vol. 47, no. 3, pp. 2094–2099 (2011) Yu, C., Zhao, C.: Rapid model identification for online glucose prediction of new subjects with type 1 diabetes using model migration method. In: IFAC World Congress of the IFAC Proceedings Volumes, vol. 47, no. 3, pp. 2094–2099 (2011)
12.
go back to reference Gevers, M.: Identification for control: from the early achievements to the revival of experiment design. Eur. J. Control 11(4), 335–352 (2005)MathSciNetCrossRefMATH Gevers, M.: Identification for control: from the early achievements to the revival of experiment design. Eur. J. Control 11(4), 335–352 (2005)MathSciNetCrossRefMATH
13.
go back to reference Pelikan, M., Mühlenbein, H.: Marginal distributions in evolutionary algorithms. In: Proceedings of the International Conference on Genetic Algorithms Mendel, vol. 98, pp. 90–95. Citeseer (1998) Pelikan, M., Mühlenbein, H.: Marginal distributions in evolutionary algorithms. In: Proceedings of the International Conference on Genetic Algorithms Mendel, vol. 98, pp. 90–95. Citeseer (1998)
14.
go back to reference Mühlenbein, H.: The equation for response to selection and its use for prediction. Evol. Comput. 5, 303–346 (1997)CrossRef Mühlenbein, H.: The equation for response to selection and its use for prediction. Evol. Comput. 5, 303–346 (1997)CrossRef
15.
go back to reference O’Neill, M., Ryan, C.: Grammatical Evolution: Evolutionary Automatic Programming in an Arbitrary Language. Kluwer Academic Publishers, Norwell (2003)CrossRefMATH O’Neill, M., Ryan, C.: Grammatical Evolution: Evolutionary Automatic Programming in an Arbitrary Language. Kluwer Academic Publishers, Norwell (2003)CrossRefMATH
16.
go back to reference Clarke, W., Cox, D., Gonder-Frederick, L., Carter, W., Pohl, S.: Evaluating clinical accuracy of systems for self-monitoring of blood glucose. Diabetes Care 10, 622–628 (1987)CrossRef Clarke, W., Cox, D., Gonder-Frederick, L., Carter, W., Pohl, S.: Evaluating clinical accuracy of systems for self-monitoring of blood glucose. Diabetes Care 10, 622–628 (1987)CrossRef
17.
Metadata
Title
Enhancing Grammatical Evolution Through Data Augmentation: Application to Blood Glucose Forecasting
Authors
Jose Manuel Velasco
Oscar Garnica
Sergio Contador
Jose Manuel Colmenar
Esther Maqueda
Marta Botella
Juan Lanchares
J. Ignacio Hidalgo
Copyright Year
2017
DOI
https://doi.org/10.1007/978-3-319-55849-3_10

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