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2013 | OriginalPaper | Chapter

2. Exploring the Ecology of Thermophiles from Australia’s Great Artesian Basin During the Genomic Era

Authors : Christopher D. Ogg, Mark D. Spanevello, Bharat K. C. Patel

Published in: Thermophilic Microbes in Environmental and Industrial Biotechnology

Publisher: Springer Netherlands

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Abstract

The Great Artesian Basin (GAB) is the world’s largest subsurface aquifer, underlying approximately one-fifth of subarid regions of the Australian continent and covering an area of over 1.7 × 106 km2, with a water-storage capacity of 8.7 × 1012 m3. The GAB provides a vital water resource for rural semiarid communities and also contains the largest onshore oil and gas reserves in Australia. The GAB is composed of alternating layers of water-bearing permeable sandstone and non-water-bearing impermeable shale. These geological formations have an immense influence on the chemical composition of GAB groundwaters, which can be bicarbonate-, chloride, sulphate or iron rich. The depth of the aquifer is estimated to be 3,000 m, and the underground water flow from the recharge areas at the edge of the basin to the discharge areas in central Australia as mound springs is estimated to be 1–5 million year−1. The water is heated by the Earth’s magma due to its depth, and the age of the water is calculated to be over 2 Ma. Not only do more than 5,000 free-flowing bores, with source temperatures ranging between 100 and 30°C, depending on bore depth, provide an important water resource to the outback communities, but the GAB is also a favourable environment for the growth of a wide diversity of microbial life. Distinct thriving macroscopic microbial mat communities can be seen colonising specific temperatures along the temperature gradient of runoff channels formed by the free-flowing bores. In the last two decades, a range of thermophilic and mesophilic microorganisms have been characterised from the GAB waters which include sulphate reducers, carbohydrate fermenters, strict aerobes and dissimilatory metal-reducing microorganisms (DIRM). During recent years, there has been a significant drop in the GAB groundwater pressure and volume, largely due to water leakage from corroding bores, and this is a matter of great concern. The isolation of metal-reducing microorganisms from the GAB environment suggests that they could be colonising the metal casing of such bores, thereby contributing to bore corrosion and subsequent complete bore failure. It is widely accepted that metal-reducing microorganisms have a large impact on the geochemistry of subsurface environments through the cycling of metals and organic matter and thereby affect water quality and taste. Furthermore, metal-reducing microorganisms have potential applications in bioremediation, mineral leaching and energy generation processes and are of evolutionary interest as metal reduction is considered to be a very ancient form of respiration. In this report, we provide an insight into the microbial diversity of this unique subsurface aquifer.

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Literature
go back to reference Andrews KT, Patel BKC (1996) Fervidobacterium gondwanense sp nov, a new thermophilic anaerobic bacterium isolated from nonvolcanically heated geothermal waters of the Great Artesian Basin of Australia. Int J Syst Bacteriol 46:265–269PubMedCrossRef Andrews KT, Patel BKC (1996) Fervidobacterium gondwanense sp nov, a new thermophilic anaerobic bacterium isolated from nonvolcanically heated geothermal waters of the Great Artesian Basin of Australia. Int J Syst Bacteriol 46:265–269PubMedCrossRef
go back to reference Brock TD, Freeze H (1969) Thermus aquaticus gen. nov., a nonsporulating extreme thermophile. J Bacteriol 98:289–297PubMed Brock TD, Freeze H (1969) Thermus aquaticus gen. nov., a nonsporulating extreme thermophile. J Bacteriol 98:289–297PubMed
go back to reference Castenholz RW (1969) Thermophilic blue-green algae and the thermal environment. Bacteriol Rev 33:476–504PubMed Castenholz RW (1969) Thermophilic blue-green algae and the thermal environment. Bacteriol Rev 33:476–504PubMed
go back to reference Garland JL, Mills AL (1991) Appl Env Microbiol 57:2351–2359 Garland JL, Mills AL (1991) Appl Env Microbiol 57:2351–2359
go back to reference Ghiorse WC, Wilson JT (1988) Microbial ecology of the terrestrial subsurface. Adv Appl Microbiol 33:107–172PubMedCrossRef Ghiorse WC, Wilson JT (1988) Microbial ecology of the terrestrial subsurface. Adv Appl Microbiol 33:107–172PubMedCrossRef
go back to reference Habermahl MA (1980) The Great Artesian Basin, Australia. BMR J Aust Geol Geophys 5:9–38 Habermahl MA (1980) The Great Artesian Basin, Australia. BMR J Aust Geol Geophys 5:9–38
go back to reference Imachi H, Sekiguchi Y, Kamagata Y, Ohashi A, Harada H (2000) Cultivation and in situ detection of a thermophilic bacterium capable of oxidizing propionate in syntrophic association with hydrogenotrophic methanogens in a thermophilic methanogenic granular sludge. Appl Environ Microbiol 66:3608–3615PubMedCrossRef Imachi H, Sekiguchi Y, Kamagata Y, Ohashi A, Harada H (2000) Cultivation and in situ detection of a thermophilic bacterium capable of oxidizing propionate in syntrophic association with hydrogenotrophic methanogens in a thermophilic methanogenic granular sludge. Appl Environ Microbiol 66:3608–3615PubMedCrossRef
go back to reference Kanso S, Patel BKC (2003) Microvirga subterranea gen. nov., sp nov., a moderate thermophile from a deep subsurface Australian thermal aquifer. Int J Syst Evol Microbiol 53:401–406PubMedCrossRef Kanso S, Patel BKC (2003) Microvirga subterranea gen. nov., sp nov., a moderate thermophile from a deep subsurface Australian thermal aquifer. Int J Syst Evol Microbiol 53:401–406PubMedCrossRef
go back to reference Kanso S, Greene AC, Patel BKC (2002) Bacillus subterraneus sp. nov., an iron- and manganese-reducing bacterium from a deep subsurface Australian thermal aquifer. Int J Syst Evol Microbiol 52:869–874PubMedCrossRef Kanso S, Greene AC, Patel BKC (2002) Bacillus subterraneus sp. nov., an iron- and manganese-reducing bacterium from a deep subsurface Australian thermal aquifer. Int J Syst Evol Microbiol 52:869–874PubMedCrossRef
go back to reference Kjeldsen KU, Kjellerup BV, Egli K, Frølund B, Nielsen PH, Ingvorsen K (2007) Phylogenetic and functional diversity of bacteria in biofilms from metal surfaces of an alkaline district heating system. FEMS Microbiol Ecol 61:384–397PubMedCrossRef Kjeldsen KU, Kjellerup BV, Egli K, Frølund B, Nielsen PH, Ingvorsen K (2007) Phylogenetic and functional diversity of bacteria in biofilms from metal surfaces of an alkaline district heating system. FEMS Microbiol Ecol 61:384–397PubMedCrossRef
go back to reference Love CA, Patel BKC, Nichols PD, Stackebrandt E (1993) Desulfotomaculum australicum, sp. nov., a thermophilic sulfate-reducing bacterium isolated from the Great Artesian Basin of Australia. Syst Appl Microbiol 16:244–251CrossRef Love CA, Patel BKC, Nichols PD, Stackebrandt E (1993) Desulfotomaculum australicum, sp. nov., a thermophilic sulfate-reducing bacterium isolated from the Great Artesian Basin of Australia. Syst Appl Microbiol 16:244–251CrossRef
go back to reference Lovley DR, Chapelle FH (1995) Deep subsurface microbial processes. Rev Geophys 33:365–381CrossRef Lovley DR, Chapelle FH (1995) Deep subsurface microbial processes. Rev Geophys 33:365–381CrossRef
go back to reference Ogg CD, Patel BKC (2009a) Caloramator australicus sp. nov., a thermophilic, anaerobic bacterium from the Great Artesian Basin of Australia. Int J Syst Evol Microbiol 59:95–101PubMedCrossRef Ogg CD, Patel BKC (2009a) Caloramator australicus sp. nov., a thermophilic, anaerobic bacterium from the Great Artesian Basin of Australia. Int J Syst Evol Microbiol 59:95–101PubMedCrossRef
go back to reference Ogg CD, Patel BKC (2009b) Fervidicola ferrireducens gen. nov., sp. nov., a thermophilic anaerobic bacterium from geothermal waters of the Great Artesian Basin, Australia. Int J Syst Evol Microbiol 59:1100–1107PubMedCrossRef Ogg CD, Patel BKC (2009b) Fervidicola ferrireducens gen. nov., sp. nov., a thermophilic anaerobic bacterium from geothermal waters of the Great Artesian Basin, Australia. Int J Syst Evol Microbiol 59:1100–1107PubMedCrossRef
go back to reference Ogg CD, Patel BKC (2009c) Sporolituus thermophilus gen. nov., sp. nov., a citrate-fermenting thermophilic anaerobic bacterium from geothermal waters of the Great Artesian Basin of Australia. Int J Syst Evol Microbiol 59:2848–2853PubMedCrossRef Ogg CD, Patel BKC (2009c) Sporolituus thermophilus gen. nov., sp. nov., a citrate-fermenting thermophilic anaerobic bacterium from geothermal waters of the Great Artesian Basin of Australia. Int J Syst Evol Microbiol 59:2848–2853PubMedCrossRef
go back to reference Ogg CD, Patel BKC (2010a) Caloramator mitchellensis sp. nov., a thermoanaerobe isolated from the geothermal waters of the Great Artesian Basin of Australia and emended description of the genus Caloramator Collins et al. 1994. Int J Syst Evol Microbiol 61(Pt 3):644–653. doi:ijs.0.023655-023650 PubMed Ogg CD, Patel BKC (2010a) Caloramator mitchellensis sp. nov., a thermoanaerobe isolated from the geothermal waters of the Great Artesian Basin of Australia and emended description of the genus Caloramator Collins et al. 1994. Int J Syst Evol Microbiol 61(Pt 3):644–653. doi:ijs.​0.​023655-023650 PubMed
go back to reference Ogg CD, Patel BKC (2010b) Fervidicella metallireducens gen. nov., sp. nov., a thermophilic, anaerobic bacterium from geothermal waters. Int J Syst Evol Microbiol 60:1394–1400PubMedCrossRef Ogg CD, Patel BKC (2010b) Fervidicella metallireducens gen. nov., sp. nov., a thermophilic, anaerobic bacterium from geothermal waters. Int J Syst Evol Microbiol 60:1394–1400PubMedCrossRef
go back to reference Ogg CD, Greene AC, Patel BKC (2010c) Thermovenabulum gondwanense sp. nov., a thermophilic anaerobic Fe(III)-reducing bacterium isolated from microbial mats thriving in a Great Artesian Basin bore runoff channel. Int J Syst Evol Microbiol 60:1079–1084PubMedCrossRef Ogg CD, Greene AC, Patel BKC (2010c) Thermovenabulum gondwanense sp. nov., a thermophilic anaerobic Fe(III)-reducing bacterium isolated from microbial mats thriving in a Great Artesian Basin bore runoff channel. Int J Syst Evol Microbiol 60:1079–1084PubMedCrossRef
go back to reference Ogg CD, Patel BKC (2011) Desulfotomaculum varum sp. nov., a thermophilic sulfate-reducing bacterium isolated from a microbial mat colonising a Great Artesian Basin bore runoff channel. Int J Syst Evol Microbiol 61:644–653 Ogg CD, Patel BKC (2011) Desulfotomaculum varum sp. nov., a thermophilic sulfate-reducing bacterium isolated from a microbial mat colonising a Great Artesian Basin bore runoff channel. Int J Syst Evol Microbiol 61:644–653
go back to reference Pace NR, Stahl DA, Lane DJ, Olsen GL (1985) Analyzing natural microbial populations by rRNA sequences. ASM News 51:4–12 Pace NR, Stahl DA, Lane DJ, Olsen GL (1985) Analyzing natural microbial populations by rRNA sequences. ASM News 51:4–12
go back to reference Ramamoorthy S, Sass H, Langner H, Schumann P, Kroppenstedt RM, Spring S, Overmann J, Rosenzweig RF (2006) Desulfosporosinus lacus sp. nov., a sulfate-reducing bacterium isolated from pristine freshwater lake sediments. Int J Syst Evol Microbiol 56:2729–2736PubMedCrossRef Ramamoorthy S, Sass H, Langner H, Schumann P, Kroppenstedt RM, Spring S, Overmann J, Rosenzweig RF (2006) Desulfosporosinus lacus sp. nov., a sulfate-reducing bacterium isolated from pristine freshwater lake sediments. Int J Syst Evol Microbiol 56:2729–2736PubMedCrossRef
go back to reference Redburn AC, Patel BKC (1994) Desulfovibrio longreachii sp. nov., a sulfate-reducing bacterium isolated from the Great Artesian Basin of Australia. FEMS Microbiol Lett 115:33–38PubMedCrossRef Redburn AC, Patel BKC (1994) Desulfovibrio longreachii sp. nov., a sulfate-reducing bacterium isolated from the Great Artesian Basin of Australia. FEMS Microbiol Lett 115:33–38PubMedCrossRef
go back to reference Rolf D (2004) The soil metagenome – a rich resource for the discovery of novel natural products. Curr Opin Biotechnol 15:199–204CrossRef Rolf D (2004) The soil metagenome – a rich resource for the discovery of novel natural products. Curr Opin Biotechnol 15:199–204CrossRef
go back to reference Schloss PD, Handelsman J (2003) Biotechnological prospects from metagenomics. Curr Opin Biotechnol 14:303–310PubMedCrossRef Schloss PD, Handelsman J (2003) Biotechnological prospects from metagenomics. Curr Opin Biotechnol 14:303–310PubMedCrossRef
go back to reference Schloss PD, Handelsman J (2005) Metagenomics for studying unculturable microorganisms: cutting the Gordian knot. Genome Biol 6(8):229PubMedCrossRef Schloss PD, Handelsman J (2005) Metagenomics for studying unculturable microorganisms: cutting the Gordian knot. Genome Biol 6(8):229PubMedCrossRef
go back to reference Schmidt TM, DeLong EF, Pace NR (1991) Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing. J Bacteriol 173:4371–4378PubMed Schmidt TM, DeLong EF, Pace NR (1991) Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing. J Bacteriol 173:4371–4378PubMed
go back to reference Spanevello MD (2001) The phylogeny of prokaryotes associated with Australia’s Great Artesian Basin. In School of Biomolecular and Physical Science. Griffith University, Brisbane Spanevello MD (2001) The phylogeny of prokaryotes associated with Australia’s Great Artesian Basin. In School of Biomolecular and Physical Science. Griffith University, Brisbane
go back to reference Spanevello MD, Yamamoto H, Patel BKC (2002) Thermaerobacter subterraneus sp. nov., a novel aerobic bacterium from the Great Artesian Basin of Australia, and emendation of the genus Thermaerobacter. Int J Syst Bacteriol 52:795–800 Spanevello MD, Yamamoto H, Patel BKC (2002) Thermaerobacter subterraneus sp. nov., a novel aerobic bacterium from the Great Artesian Basin of Australia, and emendation of the genus Thermaerobacter. Int J Syst Bacteriol 52:795–800
go back to reference Staley JT, Konopka A (1985) Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats. Annu Rev Microbiol 39:321–346PubMedCrossRef Staley JT, Konopka A (1985) Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats. Annu Rev Microbiol 39:321–346PubMedCrossRef
go back to reference von Winzingerode F, Gobel UB, Stackebrandt E (1997) Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analyses. FEMS Microbiol Rev 21:213–229CrossRef von Winzingerode F, Gobel UB, Stackebrandt E (1997) Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analyses. FEMS Microbiol Rev 21:213–229CrossRef
go back to reference Wang X-J, Yang J, Chen X-P, Sun G-X, Zhu Y-G (2009) Phylogenetic diversity of dissimilatory ferric iron reducers in paddy soil of Hunan, South China. J Soils Sediment 9:568–577CrossRef Wang X-J, Yang J, Chen X-P, Sun G-X, Zhu Y-G (2009) Phylogenetic diversity of dissimilatory ferric iron reducers in paddy soil of Hunan, South China. J Soils Sediment 9:568–577CrossRef
Metadata
Title
Exploring the Ecology of Thermophiles from Australia’s Great Artesian Basin During the Genomic Era
Authors
Christopher D. Ogg
Mark D. Spanevello
Bharat K. C. Patel
Copyright Year
2013
Publisher
Springer Netherlands
DOI
https://doi.org/10.1007/978-94-007-5899-5_2