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Published in: Natural Computing 3/2018

31-07-2017

GTVcut for neuro-radiosurgery treatment planning: an MRI brain cancer seeded image segmentation method based on a cellular automata model

Authors: Leonardo Rundo, Carmelo Militello, Giorgio Russo, Salvatore Vitabile, Maria Carla Gilardi, Giancarlo Mauri

Published in: Natural Computing | Issue 3/2018

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Abstract

Despite of the development of advanced segmentation techniques, achieving accurate and reproducible gross tumor volume (GTV) segmentation results is still an important challenge in neuro-radiosurgery. Nowadays, magnetic resonance imaging (MRI) is the most prominent modality in radiation therapy for soft-tissue anatomical districts. Gamma Knife stereotactic neuro-radiosurgery is a minimally invasive technology for dealing with inaccessible or insufficiently treated tumors with traditional surgery or radiotherapy. During a treatment planning phase, the GTV is generally contoured by experienced neurosurgeons and radiation oncologists using fully manual segmentation procedures on MR images. Unfortunately, this operative methodology is definitely time-expensive and operator-dependent. Delineation result repeatability, in terms of both intra- and inter-operator reliability, can be achieved only by using computer-assisted approaches. In this paper a novel semi-automatic seeded image segmentation method, based on a cellular automata model, for MRI brain cancer detection and delineation is proposed. This approach, called GTVcut, employs an adaptive seed selection strategy and helps to segment the GTV, by identifying the target volume to be treated using the Gamma Knife device. The accuracy of GTVcut was evaluated on a dataset composed of 32 brain cancers, using both spatial overlap-based and distance-based metrics. The achieved experimental results are very reproducible, showing the effectiveness and the clinical feasibility of the proposed approach.

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Literature
go back to reference Adler JR Jr, Chang SD, Murphy MJ, Doty J, Geis P, Hancock SL (1998) The Cyberknife: a frameless robotic system for radiosurgery. Stereotact Funct Neurosurg 69(1–4):124–128. doi:10.1159/000099863 Adler JR Jr, Chang SD, Murphy MJ, Doty J, Geis P, Hancock SL (1998) The Cyberknife: a frameless robotic system for radiosurgery. Stereotact Funct Neurosurg 69(1–4):124–128. doi:10.​1159/​000099863
go back to reference Ambrosini RD, Wang P, O’Dell WG (2010) Computer-aided detection of metastatic brain tumors using automated three-dimensional template matching. J Magn Reson Imaging 31(1):85–93. doi:10.1002/jmri.22009 CrossRef Ambrosini RD, Wang P, O’Dell WG (2010) Computer-aided detection of metastatic brain tumors using automated three-dimensional template matching. J Magn Reson Imaging 31(1):85–93. doi:10.​1002/​jmri.​22009 CrossRef
go back to reference Angelini ED, Clatz O, Mandonnet E, Konukoglu E, Capelle L, Duffau H (2007) Glioma dynamics and computational models: a review of segmentation, registration, and in silico growth algorithms and their clinical applications. Curr Med Imaging Rev 3(4):262–276. doi:10.2174/157340507782446241 CrossRef Angelini ED, Clatz O, Mandonnet E, Konukoglu E, Capelle L, Duffau H (2007) Glioma dynamics and computational models: a review of segmentation, registration, and in silico growth algorithms and their clinical applications. Curr Med Imaging Rev 3(4):262–276. doi:10.​2174/​1573405077824462​41 CrossRef
go back to reference Aslian H, Sadeghi M, Mahdavi SR, Babapour Mofrad F, Astarakee M, Khaledi N, Fadavi P (2013) Magnetic resonance imaging-based target volume delineation in radiation therapy treatment planning for brain tumors using localized region-based active contour. Int J Radiat Oncol Biol Phys 87(1):195–201. doi:10.1016/j.ijrobp.2013.04.049 CrossRef Aslian H, Sadeghi M, Mahdavi SR, Babapour Mofrad F, Astarakee M, Khaledi N, Fadavi P (2013) Magnetic resonance imaging-based target volume delineation in radiation therapy treatment planning for brain tumors using localized region-based active contour. Int J Radiat Oncol Biol Phys 87(1):195–201. doi:10.​1016/​j.​ijrobp.​2013.​04.​049 CrossRef
go back to reference Bauer S, Nolte LP, Reyes M (2011) Fully automatic segmentation of brain tumor images using support vector machine classification in combination with hierarchical conditional random field regularization. In: Medical image computing and computer-assisted intervention (MICCAI) 2011. LNCS, vol 6893, pp 354–361. doi: 10.1007/978-3-642-23626-6_44 Bauer S, Nolte LP, Reyes M (2011) Fully automatic segmentation of brain tumor images using support vector machine classification in combination with hierarchical conditional random field regularization. In: Medical image computing and computer-assisted intervention (MICCAI) 2011. LNCS, vol 6893, pp 354–361. doi: 10.​1007/​978-3-642-23626-6_​44
go back to reference Bellman R (1956) On a routing problem. Q Appl Math 16:8790 Bellman R (1956) On a routing problem. Q Appl Math 16:8790
go back to reference Boykov YY, Jolly MP (2001) Interactive graph cuts for optimal boundary & region segmentation of objects in N-D images. In: Eighth IEEE international conference on computer vision (ICCV) 2001, Vancouver, BC, vol 1, pp 105–112. doi: 10.1109/ICCV.2001.937505 Boykov YY, Jolly MP (2001) Interactive graph cuts for optimal boundary & region segmentation of objects in N-D images. In: Eighth IEEE international conference on computer vision (ICCV) 2001, Vancouver, BC, vol 1, pp 105–112. doi: 10.​1109/​ICCV.​2001.​937505
go back to reference Chang SD, Main W, Martin DP, Gibbs IC, Heilbrun MP (2003) An analysis of the accuracy of the Cyberknife: a robotic frameless stereotactic radiosurgical system. Neurosurgery 52(1):140–147. doi:10.1097/00006123-200301000-00018 Chang SD, Main W, Martin DP, Gibbs IC, Heilbrun MP (2003) An analysis of the accuracy of the Cyberknife: a robotic frameless stereotactic radiosurgical system. Neurosurgery 52(1):140–147. doi:10.​1097/​00006123-200301000-00018
go back to reference Chen C, Abdelnour-Nocera J, Wells S, Pan N (2009) Usability practice in medical imaging application development. In: HCI and usability for e-inclusion. LNCS, vol 5889, pp 405–415. doi: 10.1007/978-3-642-10308-7_29 Chen C, Abdelnour-Nocera J, Wells S, Pan N (2009) Usability practice in medical imaging application development. In: HCI and usability for e-inclusion. LNCS, vol 5889, pp 405–415. doi: 10.​1007/​978-3-642-10308-7_​29
go back to reference Eisenhauer EA, Therasse P, Bogaerts J, Schwartz LH, Sargent D, Ford R, Dancey J, Arbuck S, Gwyther S, Mooney M, Rubinstein L, Shankar L, Dodd L, Kaplan R, Lacombe D, Verweij J (2009) New response evaluation criteria in solid tumours: revised RECIST guideline (version 1.1). Eur J Cancer 45(2):228–247. doi:10.1016/j.ejca.2008.10.026 CrossRef Eisenhauer EA, Therasse P, Bogaerts J, Schwartz LH, Sargent D, Ford R, Dancey J, Arbuck S, Gwyther S, Mooney M, Rubinstein L, Shankar L, Dodd L, Kaplan R, Lacombe D, Verweij J (2009) New response evaluation criteria in solid tumours: revised RECIST guideline (version 1.1). Eur J Cancer 45(2):228–247. doi:10.​1016/​j.​ejca.​2008.​10.​026 CrossRef
go back to reference Fenster A, Chiu B (2005) Evaluation of segmentation algorithms for medical imaging. In: 27th annual international conference of the engineering in medicine and biology society, IEEE-EMBS 2005, pp 7186–7189. doi: 10.1109/IEMBS.2005.1616166 Fenster A, Chiu B (2005) Evaluation of segmentation algorithms for medical imaging. In: 27th annual international conference of the engineering in medicine and biology society, IEEE-EMBS 2005, pp 7186–7189. doi: 10.​1109/​IEMBS.​2005.​1616166
go back to reference Ghosh P, Antani SK, Long LR, Thoma GR (2011) Unsupervised Grow-Cut: cellular automata-based medical image segmentation. In: First IEEE international conference on healthcare informatics, imaging and systems biology (HISB) 2011, pp 40–47. doi: 10.1109/HISB.2011.44 Ghosh P, Antani SK, Long LR, Thoma GR (2011) Unsupervised Grow-Cut: cellular automata-based medical image segmentation. In: First IEEE international conference on healthcare informatics, imaging and systems biology (HISB) 2011, pp 40–47. doi: 10.​1109/​HISB.​2011.​44
go back to reference Hall LO, Bensaid AM, Clarke LP, Velthuizen RP, Silbiger MS, Bezdek JC (1992) A comparison of neural network and fuzzy clustering techniques in segmenting magnetic resonance images of the brain. IEEE Trans Neural Netw 3(5):672–682. doi:10.1109/72.159057 CrossRef Hall LO, Bensaid AM, Clarke LP, Velthuizen RP, Silbiger MS, Bezdek JC (1992) A comparison of neural network and fuzzy clustering techniques in segmenting magnetic resonance images of the brain. IEEE Trans Neural Netw 3(5):672–682. doi:10.​1109/​72.​159057 CrossRef
go back to reference Hamamci A, Unal G, Kucuk N, Engin K (2010) Cellular automata segmentation of brain tumors on post contrast MR images. In: Medical image computing and computer-assisted intervention (MICCAI) 2010. LNCS, vol 6363, pp 137–146. doi: 10.1007/978-3-642-15711-0_18 Hamamci A, Unal G, Kucuk N, Engin K (2010) Cellular automata segmentation of brain tumors on post contrast MR images. In: Medical image computing and computer-assisted intervention (MICCAI) 2010. LNCS, vol 6363, pp 137–146. doi: 10.​1007/​978-3-642-15711-0_​18
go back to reference Hamamci A, Kucuk N, Karaman K, Engin K, Unal G (2012) Tumor-Cut: segmentation of brain tumors on contrast enhanced MR images for radiosurgery applications. IEEE Trans Med Imaging 31(3):790–804. doi:10.1109/TMI.2011.2181857 CrossRef Hamamci A, Kucuk N, Karaman K, Engin K, Unal G (2012) Tumor-Cut: segmentation of brain tumors on contrast enhanced MR images for radiosurgery applications. IEEE Trans Med Imaging 31(3):790–804. doi:10.​1109/​TMI.​2011.​2181857 CrossRef
go back to reference Leksell L (1949) A stereotaxic apparatus for intracerebral surgery. Acta Chir Scand 99:229–233 Leksell L (1949) A stereotaxic apparatus for intracerebral surgery. Acta Chir Scand 99:229–233
go back to reference Leksell L (1951) The stereotaxic method and radiosurgery of the brain. Acta Chir Scand 102(4):316–319 Leksell L (1951) The stereotaxic method and radiosurgery of the brain. Acta Chir Scand 102(4):316–319
go back to reference Mazzara GP, Velthuizen RP, Pearlman JL, Greenberg HM, Wagner H (2004) Brain tumor target volume determination for radiation treatment planning through automated MRI segmentation. Int J Radiat Oncol Biol Phys 59(1):300–312. doi:10.1016/j.ijrobp.2004.01.026 CrossRef Mazzara GP, Velthuizen RP, Pearlman JL, Greenberg HM, Wagner H (2004) Brain tumor target volume determination for radiation treatment planning through automated MRI segmentation. Int J Radiat Oncol Biol Phys 59(1):300–312. doi:10.​1016/​j.​ijrobp.​2004.​01.​026 CrossRef
go back to reference Meier R, Knecht U, Loosli T, Bauer S, Slotboom J, Wiest R, Reyes M (2016) Clinical evaluation of a fully-automatic segmentation method for longitudinal brain tumor volumetry. Sci Rep 6:23376. doi:10.1038/srep23376 CrossRef Meier R, Knecht U, Loosli T, Bauer S, Slotboom J, Wiest R, Reyes M (2016) Clinical evaluation of a fully-automatic segmentation method for longitudinal brain tumor volumetry. Sci Rep 6:23376. doi:10.​1038/​srep23376 CrossRef
go back to reference Militello C, Rundo L, Vitabile S, Russo G, Pisciotta P, Marletta F, Ippolito M, D’Arrigo C, Midiri M, Gilardi MC (2015) Gamma Knife treatment planning: MR brain tumor segmentation and volume measurement based on unsupervised fuzzy c-means clustering. Int J Imaging Syst Technol 25(3):213–225. doi:10.1002/ima.22139 CrossRef Militello C, Rundo L, Vitabile S, Russo G, Pisciotta P, Marletta F, Ippolito M, D’Arrigo C, Midiri M, Gilardi MC (2015) Gamma Knife treatment planning: MR brain tumor segmentation and volume measurement based on unsupervised fuzzy c-means clustering. Int J Imaging Syst Technol 25(3):213–225. doi:10.​1002/​ima.​22139 CrossRef
go back to reference Miwa K, Matsuo M, Shinoda J, Aki T, Yonezawa S, Ito T, Asano Y, Yamada M, Yokoyama K, Yamada J, Yano H, Iwama T (2012) Clinical value of [11C]Methionine PET for stereotactic radiation therapy with intensity modulated radiation therapy to metastatic brain tumors. Int J Radiat Oncol Biol Phys 84(5):1139–1144. doi:10.1016/j.ijrobp.2012.02.032 CrossRef Miwa K, Matsuo M, Shinoda J, Aki T, Yonezawa S, Ito T, Asano Y, Yamada M, Yokoyama K, Yamada J, Yano H, Iwama T (2012) Clinical value of [11C]Methionine PET for stereotactic radiation therapy with intensity modulated radiation therapy to metastatic brain tumors. Int J Radiat Oncol Biol Phys 84(5):1139–1144. doi:10.​1016/​j.​ijrobp.​2012.​02.​032 CrossRef
go back to reference Patel AA, Gawlinski ET, Lemieux SK, Gatenby RA (2001) A cellular automaton model of early tumor growth and invasion: the effects of native tissue vascularity and increased anaerobic tumor metabolism. J Theor Biol 213(3):315–331. doi:10.1006/jtbi.2001.2385 MathSciNetCrossRef Patel AA, Gawlinski ET, Lemieux SK, Gatenby RA (2001) A cellular automaton model of early tumor growth and invasion: the effects of native tissue vascularity and increased anaerobic tumor metabolism. J Theor Biol 213(3):315–331. doi:10.​1006/​jtbi.​2001.​2385 MathSciNetCrossRef
go back to reference Popovici A, Popovici D (2002) cellular automata in image processing. In: 2002 Fifteenth international symposium on mathematical theory of networks and systems, vol. 1 Popovici A, Popovici D (2002) cellular automata in image processing. In: 2002 Fifteenth international symposium on mathematical theory of networks and systems, vol. 1
go back to reference Rundo L, Militello C, Russo G, Pisciotta P, Valastro LM, Sabini MG, Vitabile S, Gilardi MG, Mauri G (2016a) Neuro-radiosurgery treatments: MRI brain tumor seeded image segmentation based on a cellular automata model. In: El Yacoubi S, Wąs J, Bandini S (eds) Cellular automata. Proceedings of the 12th international conference on cellular automata for research and industry-ACRI 2016, Fez, Morocco, September 5–8, 2016. LNCS, vol 9863, pp 323–333. doi: 10.1007/978-3-319-44365-2_32 Rundo L, Militello C, Russo G, Pisciotta P, Valastro LM, Sabini MG, Vitabile S, Gilardi MG, Mauri G (2016a) Neuro-radiosurgery treatments: MRI brain tumor seeded image segmentation based on a cellular automata model. In: El Yacoubi S, Wąs J, Bandini S (eds) Cellular automata. Proceedings of the 12th international conference on cellular automata for research and industry-ACRI 2016, Fez, Morocco, September 5–8, 2016. LNCS, vol 9863, pp 323–333. doi: 10.​1007/​978-3-319-44365-2_​32
go back to reference Rundo L, Militello C, Vitabile S, Russo G, Pisciotta P, Marletta F, Ippolito M, D’Arrigo C, Midiri M, Gilardi MC (2016b) Semi-automatic brain lesion segmentation in Gamma Knife treatments using an unsupervised fuzzy c-means clustering technique. In: Advances in neural networks: computational intelligence for ICT, smart innovation, systems and technologies, vol 54, pp 15–26. Springer. doi: 10.1007/978-3-319-33747-0_2 Rundo L, Militello C, Vitabile S, Russo G, Pisciotta P, Marletta F, Ippolito M, D’Arrigo C, Midiri M, Gilardi MC (2016b) Semi-automatic brain lesion segmentation in Gamma Knife treatments using an unsupervised fuzzy c-means clustering technique. In: Advances in neural networks: computational intelligence for ICT, smart innovation, systems and technologies, vol 54, pp 15–26. Springer. doi: 10.​1007/​978-3-319-33747-0_​2
go back to reference Rundo L, Stefano A, Militello C, Russo G, Sabini MG, D’Arrigo C, Marletta F, Ippolito M, Mauri G, Vitabile S, Gilardi MC (2017) A fully automatic approach for multimodal PET and MR image segmentation in Gamma Knife treatment planning. Comput Methods Programs Biomed 144:77–96. doi:10.1016/j.cmpb.2017.03.011 Rundo L, Stefano A, Militello C, Russo G, Sabini MG, D’Arrigo C, Marletta F, Ippolito M, Mauri G, Vitabile S, Gilardi MC (2017) A fully automatic approach for multimodal PET and MR image segmentation in Gamma Knife treatment planning. Comput Methods Programs Biomed 144:77–96. doi:10.​1016/​j.​cmpb.​2017.​03.​011
go back to reference Shah R, Vattoth S, Jacob R, Manzil FFP, O’Malley JP, Borghei P, Patel BN, Curé JK (2012) Radiation necrosis in the brain: imaging features and differentiation from tumor recurrence. Radiographics 32(5):1343–1359. doi:10.1148/rg.325125002 CrossRef Shah R, Vattoth S, Jacob R, Manzil FFP, O’Malley JP, Borghei P, Patel BN, Curé JK (2012) Radiation necrosis in the brain: imaging features and differentiation from tumor recurrence. Radiographics 32(5):1343–1359. doi:10.​1148/​rg.​325125002 CrossRef
go back to reference Sinop AK, Grady L (2007) A seeded image segmentation framework unifying graph cuts and random walker which yields a new algorithm. In: 11th IEEE international conference on computer vision, ICCV 2007, pp 1–8. doi: 10.1109/ICCV.2007.4408927 Sinop AK, Grady L (2007) A seeded image segmentation framework unifying graph cuts and random walker which yields a new algorithm. In: 11th IEEE international conference on computer vision, ICCV 2007, pp 1–8. doi: 10.​1109/​ICCV.​2007.​4408927
go back to reference Soille P (2003) morphological image analysis: principles and applications, 2nd edn. Springer, New York. ISBN 3540429883MATH Soille P (2003) morphological image analysis: principles and applications, 2nd edn. Springer, New York. ISBN 3540429883MATH
go back to reference Stefano A, Vitabile S, Russo G, Ippolito M, Marletta F, D’Arrigo C, D’Urso D, Sabini MG, Gambino O, Pirrone R, Ardizzone E, Gilardi MC (2015) An automatic method for metabolic evaluation of Gamma Knife treatments. In: Proceedings of the 18th International conference image analysis and processing, ICIAP, Genoa, Italy, 7–11 September 2015, Part I. LNCS, vol 9279, pp 579–589. doi: 10.1007/978-3-319-23231-7_52 Stefano A, Vitabile S, Russo G, Ippolito M, Marletta F, D’Arrigo C, D’Urso D, Sabini MG, Gambino O, Pirrone R, Ardizzone E, Gilardi MC (2015) An automatic method for metabolic evaluation of Gamma Knife treatments. In: Proceedings of the 18th International conference image analysis and processing, ICIAP, Genoa, Italy, 7–11 September 2015, Part I. LNCS, vol 9279, pp 579–589. doi: 10.​1007/​978-3-319-23231-7_​52
go back to reference Stefano A, Vitabile S, Russo G, Ippolito M, Marletta F, D’Arrigo C, D’Urso D, Sabini MG, Gambino O, Pirrone R, Ardizzone E, Gilardi MC (2016) A fully automatic method for biological target volume segmentation of brain metastases. Int J Imaging Syst Technol 26(1):29–37. doi:10.1002/ima.22154 CrossRef Stefano A, Vitabile S, Russo G, Ippolito M, Marletta F, D’Arrigo C, D’Urso D, Sabini MG, Gambino O, Pirrone R, Ardizzone E, Gilardi MC (2016) A fully automatic method for biological target volume segmentation of brain metastases. Int J Imaging Syst Technol 26(1):29–37. doi:10.​1002/​ima.​22154 CrossRef
go back to reference Vezhnevets V, Konouchine V (2005) GrowCut: interactive multi-label ND Image segmentation by cellular automata. In: Proceedings of the Graphicon, pp 150–156 Vezhnevets V, Konouchine V (2005) GrowCut: interactive multi-label ND Image segmentation by cellular automata. In: Proceedings of the Graphicon, pp 150–156
go back to reference von Neumann J (1966) Theory of self-reproducing automata (Edited and completed by Arthur Burks). Univ. of Illinois Press von Neumann J (1966) Theory of self-reproducing automata (Edited and completed by Arthur Burks). Univ. of Illinois Press
go back to reference Zhang YJ (2001) A review of recent evaluation methods for image segmentation. In: Proceedings of the Sixth IEEE international symposium on signal processing and its applications, ISSPA 2001, vol 1, pp 148–151. doi: 10.1109/ISSPA.2001.949797 Zhang YJ (2001) A review of recent evaluation methods for image segmentation. In: Proceedings of the Sixth IEEE international symposium on signal processing and its applications, ISSPA 2001, vol 1, pp 148–151. doi: 10.​1109/​ISSPA.​2001.​949797
Metadata
Title
GTVcut for neuro-radiosurgery treatment planning: an MRI brain cancer seeded image segmentation method based on a cellular automata model
Authors
Leonardo Rundo
Carmelo Militello
Giorgio Russo
Salvatore Vitabile
Maria Carla Gilardi
Giancarlo Mauri
Publication date
31-07-2017
Publisher
Springer Netherlands
Published in
Natural Computing / Issue 3/2018
Print ISSN: 1567-7818
Electronic ISSN: 1572-9796
DOI
https://doi.org/10.1007/s11047-017-9636-z

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