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2024 | Book

Intelligent Computing in Carcinogenic Disease Detection

Authors: Kaushik Das Sharma, Subhajit Kar, Madhubanti Maitra

Publisher: Springer Nature Singapore

Book Series : Computational Intelligence Methods and Applications

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About this book

This book draws on a range of intelligent computing methodologies to effectively detect and classify various carcinogenic diseases. These methodologies, which have been developed on a sound foundation of gene-level, cell-level and tissue-level carcinogenic datasets, are discussed in Chapters 1 and 2.

Chapters 3, 4 and 5 elaborate on several intelligent gene selection methodologies such as filter methodologies and wrapper methodologies. In addition, various gene selection philosophies for identifying relevant carcinogenic genes are described in detail. In turn, Chapters 6 and 7 tackle the issues of using cell-level and tissue-level datasets to effectively detect carcinogenic diseases. The performance of different intelligent feature selection techniques is evaluated on cell-level and tissue-level datasets to validate their effectiveness in the context of carcinogenic disease detection.

In closing, the book presents illustrative case studies that demonstrate the value of intelligent computing strategies.

Table of Contents

Frontmatter
Chapter 1. Introduction
Abstract
This chapter provides an overview of carcinogenic diseases, commonly known as cancers. When cells in the human body undergo uncontrolled growth, they may form tumors, which can be either cancerous or benign. Carcinogenic cells, characterized by irregular shapes due to DNA mutations, have the ability to metastasis, or spread, to other areas of the body. Reducing mortality rates and providing effective treatment for cancer need early and precise cancer detection. While human perception was the basis for previous diagnosis approaches, new developments in digital imaging tools have brought in a new era where intelligent technology works in conjunction with the medical community. This chapter explores the methods used historically and intelligent aspects of detecting and classifying carcinogenic diseases, emphasizing the significance of early and accurate identification for improved patient outcomes.
Kaushik Das Sharma, Subhajit Kar, Madhubanti Maitra
Chapter 2. Biological Background of Benchmark Carcinogenic Data Sets
Abstract
This chapter offers a thorough review of current research on the diagnostic prediction of carcinogenic diseases, with a focus on integrating patient-specific information at the gene, cell, and tissue levels. Advanced biological studies and microarray technology provide gene level data, which are essential for intelligent computing in the identification and classification of carcinogenic diseases. These data allow for the simultaneous monitoring of thousands of gene expression levels. Generally, cell level data, which are represented by microscopic blood smear images, have been visually analyzed by experienced technologists. An accurate diagnosis depends on identifying and detecting visual features that are impacted by the staining, smearing, and recording procedures. Tissue level data, exemplified by CT scan images, provide crucial insights into the distribution of physical attributes, essential for detecting and classifying carcinogenic diseases. This chapter explores the in-depth procedure for preparing CT scan, microscopic blood smear image, and microarray gene expression data. Additionally, standard benchmark data sets for these modalities are discussed, contributing to the advancement of research in the field.
Kaushik Das Sharma, Subhajit Kar, Madhubanti Maitra
Chapter 3. Intelligent Computing Approaches for Carcinogenic Disease Detection: A Review
Abstract
This chapter provides an overview of recent advancements in the identification and classification of cancer-causing disorders, focusing on intelligent diagnosis through the application of diverse machine learning techniques. In the last few years, researchers have developed advanced methods that make use of gene, cell, and tissue databases. The chapter provides an overview of the different approaches used in this sector and provides insight into how intelligent technologies are changing the landscape of cancer detection. The significance of these strategies is analyzed, offering insights into how they might improve diagnosis accuracy and advance our understanding of cancer-related disorders.
Kaushik Das Sharma, Subhajit Kar, Madhubanti Maitra
Chapter 4. Classical Approaches in Gene Evaluation for Carcinogenic Disease Detection
Abstract
This chapter explores the critical role that microarray technology plays in computational biology, providing a powerful tool for detecting anomalies in the human body through gene expression information. Microarray data sets are critical to the automated detection of carcinogenic diseases, as they facilitate manual pathological diagnosis methods. The challenges arise from the vast number of genes within limited accessible samples, making the analysis of gene expression levels intricate. Two classical gene selection strategies, namely filter and wrapper methodologies, are explored in this chapter. In filter techniques, genes are ranked statistically, while in wrapper approaches, genes are repeatedly chosen depending on classification outcomes. Although they are predicted to perform better than filter methods, wrapper approaches have a higher computational cost. With a focus on SRBCT, ALL_AML, and MLL subclasses of cancer, the chapter seeks to distinguish cancer types based on patterns of gene expression. For a diagnosis to be both accurate and efficient, filter- and wrapper-based gene selection techniques have been examined. The chapter delves more into gene ranking techniques based on filter methods with binary and multi-class data sets. Additionally, it elaborates on the utility of Particle Swarm Optimization (PSO) methodology in wrapper-based gene selection from microarray gene expression data, contributing to the understanding of effective diagnostic methodologies.
Kaushik Das Sharma, Subhajit Kar, Madhubanti Maitra
Chapter 5. Intelligent Computing Approach in Gene Evaluation for Carcinogenic Disease Detection
Abstract
This chapter addresses the challenge of identifying a small subset of crucial genes from microarray data, given the limited number of effective samples compared to the vast number of genes. The work suggests a novel method combining adaptive k-nearest neighbor-based gene selection with Particle Swarm Optimization (PSO) to obtain accurate identification of cancer subtypes. The aim is to identify a small yet informative set of genes that can be properly classified. In order to effectively explore the right neighborhood and accurate classification, the suggested method incorporates a heuristics for calculating the optimal value of k. Three benchmark microarray data sets namely SRBCT, ALL_AML, and MLL are used to test the suggested gene election method. The method’s effectiveness is demonstrated by the results, which include high classification accuracy on blind test samples, the number of informative genes identified, and computational efficacy. Furthermore, other classifiers, such as Support Vector Machine (SVM), are used to assess the usefulness and universal properties of the identified genes. The results confirm that the suggested methodology is resilient and useful in the field of carcinogenic disease classification.
Kaushik Das Sharma, Subhajit Kar, Madhubanti Maitra
Chapter 6. Intelligent Computing Approach for Leukocyte Identification
Abstract
An automated approach for identifying and classifying leukocytes in microscopic blood smear images have been analyzed in this chapter. The approach involves identifying leukocytes using color-based clustering and then extracting a large set of features from the detected cells. Weighted aggregation-based transposition PSO (WATPSO) is introduced that effectively selects an optimized subset of features that are necessary for correctly classifying healthy cells and blast cells. An acute lymphoblastic leukemia (ALL) benchmark data set is utilized to test the suggested methodology. Remarkably, the result showcases a test accuracy of 97.30% with only 6 optimal features chosen by the WATPSO method. The experimental results highlight the effectiveness of this methodology, highlighting the use of few informative features and excellent test accuracy.
Kaushik Das Sharma, Subhajit Kar, Madhubanti Maitra
Chapter 7. Intelligent Computing Approach for Lung Nodule Detection
Abstract
This chapter focuses on automating the diagnosis of lung cancer by identifying and classifying lung nodules in lung CT images. This approach involves formulating a weighted dual goal optimization problem that selects an optimal feature subset for accurate classification of lung nodules. In order to guarantee that a compact feature subset enhances nodule classification accuracy, the weights allocated to the discriminating feature subset and classification accuracy are strategically determined. Here, an adaptive weighted aggregation strategy based on the Group Improvised Harmony Search (GrIHS) evolutionary optimization technique has been proposed to tackle the optimization problem. To further improve nodule classification accuracy, an adaptive k-NN classifier has been integrated into the GrIHS technique to determine the optimal number of neighborhoods in the search space. The proposed methodology has been successfully applied to the Lung Image Database Consortium (LIDC) data set. The experimental findings demonstrate the efficacy of the proposed method, with only 12 differentiating features required to achieve a remarkable sensitivity of 97.59% and blind testing accuracy of 97.78%. Consequently, the proposed methodology has the potential to assist radiologists in diagnosing lung cancer by providing reliable support in the interpretation of lung computed tomography images.
Kaushik Das Sharma, Subhajit Kar, Madhubanti Maitra
Chapter 8. Conclusion
Abstract
The intelligent approaches for the detection and classification of different carcinogenic diseases are presented in this book, with an emphasis on information at the gene, cell, and tissue levels. The suggested frameworks achieve strong outcomes in microscopic image investigations and DNA microarray data processing by employing intelligent assessment criteria. Important contributions include the study of gene subset identification, improved gene selection using an adaptive k-NN strategy based on PSO, and sophisticated methods for lung nodule and leukocyte detection and categorization. These methods offer medical professionals a helpful second opinion and perform on par with or better than existing methods. The book also highlights future research possibilities, stressing the value of standardized diagnostic methods and the promise of deep learning networks in biomedical image analysis. It also emphasizes the applicability of microarray technology in clinical microbiology and multimodal medical imaging in advancing cancer research and intelligent diagnostics.
Kaushik Das Sharma, Subhajit Kar, Madhubanti Maitra
Backmatter
Metadata
Title
Intelligent Computing in Carcinogenic Disease Detection
Authors
Kaushik Das Sharma
Subhajit Kar
Madhubanti Maitra
Copyright Year
2024
Publisher
Springer Nature Singapore
Electronic ISBN
978-981-9724-24-6
Print ISBN
978-981-9724-23-9
DOI
https://doi.org/10.1007/978-981-97-2424-6

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