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2019 | OriginalPaper | Chapter

10. “Omics Technologies” and Biodiesel Production

Authors : Reza Sharafi, Gholamreza Salehi Jouzani

Published in: Biodiesel

Publisher: Springer International Publishing

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Abstract

Biodiesel is being considered as a renewable fuel candidate to completely or partially replace fossil diesel. The most important challenge in development of different generations of biodiesel is input cost, low oil yield in the sources, and lack of efficient technologies for biodiesel production. Recent developments in next-generation sequencing technologies (NGS) and new “omics” methodologies have provided excellent opportunities for high-throughput functional genomic surveys in different organisms. In this context, different “Omics” technologies have been widely used to enhance the oil yield in oil-producing plants and microorganisms. This chapter reviews the existing studies revolving around new “Omics” technologies used to enhance the oil and biodiesel production in the promising plant for biodiesel production, Jatropha, as a sample.

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previous chapter Exergy-Based Sustainability Analysis of Biodiesel Production and Combustion Processes

Agarwal M, Shrivastava N, Padh H (2010) Advances in molecular marker techniques and their applications in plant sciences. Plant Cell Rep 27:617–631CrossRef

Al-Dous EK, George B, Al-Mahmoud ME, Al-Jaber MY, Wang H, Salameh YM, Al-Azwani EK, Chaluvadi S, Pontaroli AC, DeBarry J, Arondel V (2011) De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera). Nat Biotechnol 29(6):521–527CrossRef

Balaman ŞY, Selim H (2015) Biomass to energy supply chain network design: An overview of models, solution approaches and applications. In: Handbook of bioenergy. Springer International Publishing, pp 1–35

Basha SD, Sujatha M (2007) Inter and intra population variability of Jatropha curcas (L.) characterized by RAPD and ISSR markers and development of population specific SCAR markers. Euphytica 156:375–386CrossRef

Basha SD, Sujatha M (2009) Genetic analysis of Jatropha species and interspecific hybrids of Jatropha curcas using nuclear and organelle specific markers. Euphytica 168:197–214CrossRef

Burgueño J, de los Campos G, Weigel K, Crossa J (2012) Genomic prediction of breeding values when modeling genotype × environment interaction using pedigree and dense molecular markers. Crop Sci 52(2):707–719CrossRef

Cartagena JA, Seki M, Tanaka M, Yamauchi T, Sato S, Hirakawa H, Tsuge T (2015) Gene expression profiles in Jatropha under drought stress and during recovery. Plant Mol Biol Rep 33(4):1075–1087CrossRef

Cao J, Schneeberger K, Ossowski S, Günther T, Bender S, Fitz J, Koenig D, Lanz C, Stegle O, Lippert C, Wang X (2011) Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nat Genet 43(10):956–963CrossRef

Chan AP, Crabtree J, Zhao Q, Lorenzi H, Orvis J, Puiu D, Melake-Berhan A, Jones KM, Redman J, Chen G, Cahoon EB (2010) Draft genome sequence of the oilseed species Ricinus communis. Nat Biotechnol 28(9):951–956CrossRef

Chen MS, Wang GJ, Wang RL, Wang J, Song SQ, Xu ZF (2011) Analysis of expressed sequence tags from biodiesel plant Jatropha curcas embryos at different developmental stages. Plant Sci 181(6):696–700CrossRef

Ceasar SA, Ignacimuthu S (2011) Applications of biotechnology and biochemical engineering for the improvement of Jatropha and biodiesel: a review. Renew Sustain Energy Rev 15(9):5176–5185CrossRef

Clarke J (2016) Quantitative trait locus mapping of oil yield and oil quality related traits in the biofuel crop Jatropha curcas. Doctoral dissertation, University of York

Costa GGL, Cardoso KC, Del Bem LEV, Lima AC, Cunha MAS, de Campos-Leite L et al (2010) Transcriptome analysis of the oil-rich seed of the bioenergy crop Jatropha curcas L. BMC Genom 11

Costa GG, Cardoso KC, Del Bem LE, Lima AC, Cunha MA, de Campos-Leite L, Vicentini R, Papes F, Moreira RC, Yunes JA, Campos FA (2010b) Transcriptome analysis of the oil-rich seed of the bioenergy crop Jatropha curcas L. BMC Genom 11(1):462CrossRef

de Azevedo Peixoto L, Laviola BG, Alves AA, Rosado TB, Bhering LL (2017) Breeding Jatropha curcas by genomic selection: a pilot assessment of the accuracy of predictive models. PLoS ONE 12(3):e0173368CrossRef

Debnath M, Pandey M, Malik CP (2010) Analysing the potentiality of Jatropha using “Omics Technology”. J Pl Sci Res 26(1):29–51

del Pilar Rodriguez M, Brzezinski R, Faucheux N, Heitz M (2016) Enzymatic transesterification of lipids from microalgae into biodiesel: a review

Demirbas A (2009) Progress and recent trends in biodiesel fuels. Energy Convers Manag 50:14–34CrossRef

Doerge RW (2002) Mapping and analysis of quantitative trait loci in experimental populations. Nat Rev Genet 3(1):43–52CrossRef

Eswaran N, Parameswaran S, Sathram B, Anantharaman B, Kumar GRK, Tangirala SJ (2010) Yeast functional screen to identify genetic determinants capable of conferring abiotic stress tolerance in Jatropha curcas. BMC Biotechnol 10:23CrossRef

FAO (2007) Sustainable bioenergy: a framework for decision makers. United Nations Energy

FAO (2008) The state of food and agriculture 2008. Biofuels: prospects, risks and opportunities. http://www.fao.org/publications/sofa-2008/en

Fjerbaek L, Christensen KV, Norddahl B (2009) A review of the current state of biodiesel production using enzymatic transesterification. Biotechnol Bioeng 102(5):1298–1315CrossRef

Franco MC, Gomes KA, de Carvalho Filho MM, Harakava R, Carels N, Siqueira WJ, Latado RR, de Argollo Marques D (2016) Agrobacterium-mediated transformation of Jatropha curcas leaf explants with a fungal chitinase gene. Afr J Biotech 15(37):2006–2016CrossRef

Franco MC, Marques DDA, Siqueira WJ, Latado RR (2014) Micropropagation of Jatropha curcas superior genotypes and evaluation of clonal fidelity by target region amplification polymorphism (TRAP) molecular marker and flow cytometry. Afr J Biotechnol 13(38)

Grover A, Kumari M, Singh S, Rathode SS, Gupta SM, Pandey P, Gilotra S, Kumar D, Arif M, Ahmed Z (2014) Analysis of Jatropha curcas transcriptome for oil enhancement and genic markers. Physiol Mol Biol Plants 20(1):139–142CrossRef

Grover A, Patade VY, Kumari M, Gupta SM, Arif M, Ahmed Z (2013) Omics approaches in biofuel production for a green environment. In: Press CRC (ed) OMICS: applications in biomedical, agricultural, and environmental sciences. Taylor and Francis Group, Boca Raton, pp 623–636CrossRef

Gu K, Yi C, Tian D, Sangha JS, Hong Y, Yin Z (2012) Expression of fatty acid and lipid biosynthetic genes in developing endosperm of Jatropha curcas. Biotechnol Biofuels 5:47CrossRef

Gu KY, Chiam H, Tian DS, Yin ZC (2011) Molecular cloning and expression of heteromeric ACCase subunit genes from Jatropha curcas. Plant Sci 180(4):642–649CrossRef

Gu K, Mao H, Yin Z (2014) Production of marker-free transgenic Jatropha curcas expressing hybrid Bacillus thuringiensis δ-endotoxin Cry1Ab/1Ac for resistance to larvae of tortrix moth (Archips micaceanus). Biotechnol Biofuels 7(1):68CrossRef

Gu K, Tian D, Mao H, Wu L, Yin Z (2015) Development of marker-free transgenic Jatropha curcas producing curcin-deficient seeds through endosperm-specific RNAi-mediated gene silencing. BMC Plant Biol 15(1):242CrossRef

Gupta P, Idris A, Mantri S, Asif MH, Yadav HK, Roy JK et al (2012) Discovery and use of single nucleotide polymorphic (SNP) markers in Jatropha curcas L. Mol Breed 30(3):1325–1335CrossRef

Heslot N, Yang H-P, Sorrells ME, Jannink J-L (2012) Genomic selection in plant breeding: a comparison of models. Crop Sci 52(1):146–160CrossRef

Hirakawa H, Tsuchimoto S, Sakai H, Nakayama S, Fujishiro T, Kishida Y et al (2012) Upgraded genomic information of Jatropha curcas L. Plant Biotechnol 29(2):123–130CrossRef

IEA (2004) Biofuels for transport, International Energy Agency. http://www.iea.org/textbase/nppdf/free/2004/biofuels2004.pdf. Accessed 17 July 2010

Jaganath B, Subramanyam K, Mayavan S, Karthik S, Elayaraja D, Udayakumar R, Manickavasagam M, Ganapathi A (2014) An efficient in planta transformation of Jatropha curcas (L.) and multiplication of transformed plants through in vivo grafting. Protoplasma 251(3):591–601CrossRef

Jain R, Coffey M, Lai K, Kumar A, MacKenzie S (2000) Enhancement of seed oil content by expression of glycerol-3-phosphate acyltransferase genes. Biochem Soc Trans 28:959–960CrossRef

Jha B, Mishra A, Jha A, Joshi M (2013) Developing transgenic Jatropha using the SbNHX1 gene from an extreme halophyte for cultivation in saline wasteland. PLoS ONE 8(8):e71136CrossRef

Jiang Q, Yen SH, Stiller J, Edwards D, Scott PT, Gresshoff PM (2017) Genetic, biochemical, and morphological diversity of the legume biofuel tree Pongamia pinnata. Plant Genet Genom Biotechnol 1(3):54–67. ISSN 2332-2012CrossRef

Joshi M, Mishra A, Jha B (2011) Efficient genetic transformation of Jatropha curcas L. by microprojectile bombardment using embryo axes. Ind Crops Prod 33(1):67–77CrossRef

Kim MJ, Yang SW, Mao HZ, Veena SP, Yin JL, Chua NH (2014) Gene silencing of Sugar-dependent 1 (JcSDP1), encoding a patatin-domain triacylglycerol lipase, enhances seed oil accumulation in Jatropha curcas. Biotechnol Biofuels 7(1):36CrossRef

King AJ, Montes LR, Clarke JG, Itzep J, Perez CA, Jongschaap RE, Visser RG, van Loo EN, Graham IA (2015) Identification of QTL markers contributing to plant growth, oil yield and fatty acid composition in the oilseed crop Jatropha curcas L. Biotechnol Biofuels 8(1):160CrossRef

Kircher M, Kelso J (2010) High-throughput DNA sequencing—concepts and limitations. BioEssays 32:524–536CrossRef

Kole PR, Bhat KV, Chaudhury R, Malik SK (2015) Genetic variation among Jatropha curcas L. using dominant molecular marker collected from different agro-climatic regions of India. Indian J Genet 75(2):267–270CrossRef

Kumar RS, Parthiban KT, Rao MG (2008) Molecular characterization of Jatropha genetic resources through inter-simple sequence repeat [ISSR] markers. Mol Biol Rep 36:1951–1956CrossRef

Kumar N, Anand KV, Pamidimarri DS, Sarkar T, Reddy MP, Radhakrishnan T, Kaul T, Reddy MK, Sopori SK (2010) Stable genetic transformation of Jatropha curcas via Agrobacterium tumefaciens-mediated gene transfer using leaf explants. Ind Crops Prod 32(1):41–47CrossRef

Laosatit K, Tanya P, Somta P, Ruang-Areerate P, Sonthirod C, Tangphatsornruang S, Juntawong P, Srinives P (2016) De novo transcriptome analysis of apical meristem of Jatropha. Plant Mol Biol Rep 34(4):786–793CrossRef

Laviola BG, Rodrigues EV, Teodoro PE, de Azevedo Peixoto L, Bhering LL (2017) Biometric and biotechnology strategies in Jatropha genetic breeding for biodiesel production. Renew Sustain Energy Rev 76:894–904CrossRef

Laviola BG, Alves AA, Rosado TB, Bhering LL, Formighieri EF, de Azevedo Peixoto L (2018) Establishment of new strategies to quantify and increase the variability in the Brazilian Jatropha genotypes. Ind Crop Prod 117:216–223CrossRef

Li C, Ng A, Xie L, Mao H, Qiu C, Srinivasan R, Yin Z, Hong Y (2016) Engineering low phorbol ester Jatropha curcas seed by intercepting casbene biosynthesis. Plant Cell Rep 35(1):103–114CrossRef

Li M, Li H, Jiang H, Pan X, Wu G (2008) Establishment of an Agrobacteriuim-mediated cotyledon disc transformation method for Jatropha curcas. Plant Cell Tissue Organ Cult 92(2):173–181CrossRef

Li-Beisson Y, Peltier G (2013) Third-generation biofuels: current and future research on microalgal lipid biotechnology. OCL 20(6):D606CrossRef

Lin Z, An J, Wang J, Niu J, Ma C, Wang L, Yuan G, Shi L, Liu L, Zhang J, Zhang Z (2017) Integrated analysis of 454 and Illumina transcriptomic sequencing characterizes carbon flux and energy source for fatty acid synthesis in developing Lindera glauca fruits for woody biodiesel. Biotechnol Biofuels 10(1):134CrossRef

Liu P, Wang C, Li L, Sun F, Liu P, Yue G (2011) Mapping QTLs for oil traits and eQTLs for oleosin genes in Jatropha. BMC Plant Biol 11(1):132CrossRef

Liu Y, Yang Y, Yin X, Li L, Zhu H, Lu J, Shi Y (2017) Expression of JcFATA gene in Jatropha curcas and its promoter cloning and analysis. J Agric Biotechnol 25(2):214–221

Lorenz AJ, Chao S, Asoro FG, Heffner EL, Hayashi T, Iwata H et al (2011) Genomic selection in plant breeding: knowledge and prospects. Adv Agron 110:77CrossRef

Lorenz AJ, Smith KP, Jannink J-L (2012) Potential and optimization of genomic selection for Fusarium head blight resistance in six-row barley. Crop Sci 52(4):1609–1621CrossRef

Maisonneuve S, Bessoule J-J, Lessire R, Delseny M, Roscoe TJ (2010) Expression of rapeseed microsomal lysophosphatidic acid acyltransferase isozymes enhances seed oil content in Arabidopsis. Plant Physiol 152:670–684CrossRef

Mardis ER (2013) Next-generation sequencing platforms. Annu Rev Anal Chem 6:287–303CrossRef

Mastan SG, Rathore MS, Ghosh A (2016) Molecular characterization of genetic and epigenetic divergence in selected Jatropha curcas L. germplasm using AFLP and MS-AFLP markers. Plant Gene 8:42–49CrossRef

Meuwissen THE, Hayes BJ, Goddard ME (2001) Prediction of total genetic value using genome-wide dense marker maps. Genetics 157(4):1819–1829. pmid:11290733

Misra P, Toppo DD, Mishra MK, Saema S, Singh G (2012) Agrobacterium tumefaciens-mediated transformation protocol of Jatropha curcas L. using leaf and hypocotyl segments. J Plant Biochem Biotechnol 21(1):128–133CrossRef

Moniruzzaman M, Yaakob Z, Khatun R (2016) Biotechnology for Jatropha improvement: a worthy exploration. Renew Sustain Energy Rev 54:1262–1277CrossRef

Montes JM, Melchinger AE (2016) Domestication and Breeding of Jatropha curcas L. Trends Plant Sci 21(12):1045–1057CrossRef

Montes JM, Technow F, Martin M, Becker K (2014) Genetic diversity in Jatropha curcas L. assessed with SSR and SNP markers. Diversity 6(3):551–566CrossRef

Morozova O, Marra MA (2008) Applications of next-generation sequencing technologies in functional genomics. Genomics 92(5):255–264CrossRef

Mudalkar S, Golla R, Ghatty S, Reddy AR (2014) De novo transcriptome analysis of an imminent biofuel crop, Camelina sativa L. using Illumina GAIIX sequencing platform and identification of SSR markers. Plant Mol Biol 84(1–2):159–171CrossRef

Najafi G, Ghobadian B, Tavakoli T, Yusaf T (2009) Potential of bioethanol production from agricultural wastes in Iran. Sustain Energy Rev, Renew. https://doi.org/10.1016/j.rser.2008.08.010CrossRef

Nanasato Y, Kido M, Kato A, Ueda T, Suharsono S, Widyastuti U, Tsujimoto H, Akashi K (2015) Efficient genetic transformation of Jatropha curcas L. by means of vacuum infiltration combined with filter-paper wicks. In Vitro Cell Dev Biol-Plant 51(4):399–406CrossRef

Natarajan P, Kanagasabapathy D, Gunadayalan G, Panchalingam J, Sugantham PA, Singh KK, Madasamy P (2010) Gene discovery from Jatropha curcas by sequencing of ESTs from normalized and full-length enriched cDNA library from developing seeds. BMC Genom 11(1):606CrossRef

Natarajan P, Parani M (2011) De novo assembly and transcriptome analysis of five major tissues of Jatropha curcas L. using GS FLX titanium platform of 454 pyrosequencing. BMC Genomics 12(1):191

Pamidimarri DVNS, Pandya N, Reddy MP, Radhakrishnan T (2008a) Comparative study of interspecific genetic divergence and phylogenic analysis of genus Jatropha by RAPD and AFLP Genetic divergence and phylogenic analysis of genus Jatropha. Mol Biol Rep 36:901–907CrossRef

Pamidimarri DVNS, Singh S, Mastan SG, Patel J, Reddy MP (2008b) Molecular characterization and identification of markers for toxic and non-toxic varieties of Jatropha curcas L. using RAPD, AFLP and SSR markers. Mol Biol Rep 36:1357–1364CrossRef

Pamidimarri DS, Reddy MP (2014) Phylogeography and molecular diversity analysis of Jatropha curcas L. and the dispersal route revealed by RAPD, AFLP and nrDNA-ITS analysis. Mol Biol Rep 41(5):3225–3234CrossRef

Pan J, Fu Q, Xu ZF (2010) Agrobacterium tumefaciens-mediated transformation of biofuel plant Jatropha curcas using kanamycin selection. Afr J Biotech 9(39):6477–6481

Patade VY, Khatri D, Kumar K, Grover A, Kumari M, Gupta SM, Kumar D, Nasim M (2014) RNAi mediated curcin precursor gene silencing in Jatropha (Jatropha curcas L.). Mol Biol Rep 41(7):4305–4312CrossRef

Pioto F, Costa RS, França SC, Gavioli EA, Bertoni BW, Zingaretti SM (2015) Genetic diversity by AFLP analysis within Jatropha curcas L. populations in the State of São Paulo, Brazil. Biomass Bioenergy 80:316–320CrossRef

Pootakham W, Jomchai N, Ruang-areerate P, Shearman JR, Sonthirod C, Sangsrakru D, Tragoonrung S, Tangphatsornruang S (2015) Genome-wide SNP discovery and identification of QTL associated with agronomic traits in oil palm using genotyping-by-sequencing (GBS). Genomics 105(5):288–295CrossRef

Purkayastha J, Sugla T, Paul A, Solleti SK, Mazumdar P, Basu A, Mohommad A, Ahmed Z, Sahoo L (2010) Efficient in vitro plant regeneration from shoot apices and gene transfer by particle bombardment in Jatropha curcas. Biol Plant 54(1):13–20CrossRef

Qu J, Mao HZ, Chen W, Gao SQ, Bai YN, Sun YW, Geng YF, Ye J (2012) Development of marker-free transgenic Jatropha plants with increased levels of seed oleic acid. Biotechnol Biofuels 5(1):10CrossRef

Ram SG, Parthiban KT, Kumar RS, Thiruvengadam V, Paramathma M (2008) Genetic diversity among Jatropha species as revealed by RAPD markers. Genet Resources Crop Evol 55:803–809CrossRef

Ranade SA, Srivastava AP, Rana TS, Srivastava J, Tuli R (2008) Easy assessment of diversity in Jatropha curcas L. plants using two single-primer amplification reaction (SPAR) methods. Biomass Bioenergy 32:533–540CrossRef

Raposo RS, Souza IGB, Veloso MEC, Kobayashi AK, Laviola BG, Diniz FM (2014) Development of novel simple sequence repeat markers from a genomic sequence survey database and their application for diversity assessment in Jatropha curcas germplasm from Guatemala. Genet Mol Res 13(3):6099–6106CrossRef

Raupach MJ, Amann R, Wheeler QD, Roos C (2016) The application of “-omics” technologies for the classification and identification of animals. Org Divers Evol 16(1):1–12CrossRef

Sato S, Hirakawa H, Isobe S, Fukai E, Watanabe A, Kato M et al (2011) Sequence analysis of the genome of an oil-bearing tree, Jatropha curcas L. DNA Res 18(1):65–76CrossRef

Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, Nelson W, Hyten DL, Song Q, Thelen JJ, Cheng J, Xu D (2010) Genome sequence of the palaeopolyploid soybean. Nature 463(7278):178–183CrossRef

Sharma N, Anderson M, Kumar A, Zhang Y, Giblin EM, Abrams SR et al (2008) Transgenic increases in seed oil content are associated with the differential expression of novel Brassica-specific transcripts. BMC Genom 9:619CrossRef

Silva-Junior O, Rosado T, Laviola B, Pappas M, Pappas G, Grattapaglia D (2011) Genome-wide SNP discovery from a pooled sample of accessions of the biofuel plant Jatropha curcas based on whole-transcriptome Illumina resequencing. BMC Proc 5:P57CrossRef

Singh R, Ong-Abdullah M, Low ETL, Manaf MAA, Rosli R, Nookiah R, Ooi LCL, Ooi SE, Chan KL, Halim MA, Azizi N (2013) Oil palm genome sequence reveals divergence of interfertile species in Old and New worlds. Nature 500(7462):335–339CrossRef

Staton SE, Bakken BH, Blackman BK, Chapman MA, Kane NC, Tang S, Ungerer MC, Knapp SJ, Rieseberg LH, Burke JM (2012) The sunflower (Helianthus annuus L.) genome reflects a recent history of biased accumulation of transposable elements. Plant J 72(1):142–153CrossRef

Schneider MV, Orchard S (2011) Omics technologies, data and bioinformatic principles. Methods Mol Biol 719:3–30CrossRef

Sun F, Liu P, Ye J, Lo L, Cao S, Li L, Yue G, Wang C (2012) An approach for Jatropha improvement using pleiotropic QTLs regulating plant growth and seed yield. Biotechnol Biofuels 5(1):42CrossRef

Tabatabaei M, Tohidfar M, Salehi Jouzani G, Safarnejad M, Pazouki M (2011) Biodiesel production from genetically engineered microalgae: future of bioenergy in Iran. Renew Sustain Energy Rev 15(4):1918–1927CrossRef

Taher H, Al‐Zuhair S (2016) The use of alternative solvents in enzymatic biodiesel production: a review. Biofuels Bioprod Biorefin

Tang MJ, Sun JW, Liu Y, Chen F, Shen SH (2007) Isolation and functional characterization of the JcERF gene, a putative AP2/EREBP domain containing transcription factor, in the woody oil plant Jatropha curcas. Plant Mol Biol 63(3):419–428CrossRef

Tatikonda L, Wani SP, Kannan S, Naresh B, Hoisington DA, Devi P (2009) AFLP-based molecular characterization of an elite germplasm collection of Jatropha curcas L. A biofuel plant. Plant Sci 176:505–513CrossRef

Tian Y, Zhang M, Hu X, Wang L, Dai J, Xu Y, Chen F (2016) Over-expression of CYP78A98, a cytochrome P450 gene from Jatropha curcas L., increases seed size of transgenic tobacco. Electron J Biotechnol 19:15–22CrossRef

Tong L, Shu-Ming P, Wu-Yuan D, Dan-Wei M, Ying X, Meng X, Fang C (2006) Characterization of a new stearoyl-acyl, carrier protein desaturase gene from Jatropha curcas. Biotechnol Lett 28:657–662CrossRef

Tong L, Wei MD, Ying X, Yuan DW, Meng X, Wei QR, Fang C (2007) Cloning and characterization of a stearoyl-ACP desaturase gene from Jatropha curcas. J Shanghai Univ (English Edition) 11(2):182–188CrossRef

Tsuchimoto S, Cartagena J, Khemkladngoen N, Singkaravanit S, Kohinata T, Wada N, Sakai H, Morishita Y, Suzuki H, Shibata D, Fukui K (2012) Development of transgenic plants in Jatropha with drought tolerance. Plant Biotechnol 29(2):137–143CrossRef

van Dijk EL, Auger H, Jaszczyszyn Y, Thermes C (2014) Ten years of next-generation sequencing technologies. Trends Genet 30:418–426CrossRef

Verma KC, Singh US, Verma SK, Gaur AK (2016) Molecular profiling of Jatropha curcas L. collected from different geographical locations of India. Int J Ambient Energy 37(1):20–23CrossRef

Wang CM, Liu P, Yi CX, Gu KY, Sun F, Li L et al (2011a) A first generation microsatellite- and SNP-based linkage map of Jatropha. PLoS ONE 6(8):e3632

Wang L, Gao J, Qin X, Shi X, Luo L, Zhang G, Yu H, Li C, Hu M, Liu Q, Xu Y (2015) JcCBF2 gene from Jatropha curcas improves freezing tolerance of Arabidopsis thaliana during the early stage of stress. Mol Biol Rep 42(5):937–945CrossRef

Wang X, Wang H, Wang J, Sun R, Wu J, Liu S, Bai Y, Mun JH, Bancroft I, Cheng F, Huang S (2011b) The genome of the mesopolyploid crop species Brassica rapa. Nat Genet 43(10):1035–1039CrossRef

Wang CM, Liu P, Sun F, Li L, Liu P, Ye J, Yue GH (2012) Isolation and identification of miRNAs in Jatropha curcas. Int J Biological Sci 8(3):418CrossRef

Wu L, Goh ML, Tian D, Gu K, Hong Y, Yin Z (2017) Isolation and characterization of curcin genes with distinct expression patterns in leaves and seeds of Jatropha curcas L. Plant Gene 9:34–44CrossRef

Wu P, Zhou C, Cheng S, Wu Z, Lu W, Han J, Chen Y, Chen Y, Ni P, Wang Y, Xu X (2015) Integrated genome sequence and linkage map of physic nut (Jatropha curcas L.), a biodiesel plant. Plant J 81(5):810–821CrossRef

Xiong W, Wei Q, Wu P, Zhang S, Li J, Chen Y, Li M, Jiang H, Wu G (2017) Molecular cloning and characterization of two β-ketoacyl-acyl carrier protein synthase I genes from Jatropha curcas L. J Plant Physiol 214:152–160CrossRef

Yadav HK, Ranjan A, Asif MH, Mantri S, Sawant SV Tuli R (2011) EST-derived SSR markers in Jatropha curcas L. development, characterization, polymorphism, and transferability across the species/genera. Tree Genet & Genomes 7(1):207–219

Yang J, Yang MF, Wang D, Chen F, Shen SH (2010) JcDof1, a Dof transcription factor gene, is associated with the light-mediated circadian clock in Jatropha curcas. Physiologia Plantarum 139(3):324–334

Yang D, Zhang H, Peng K, Chen L, He H, Huang X, Qin J, He G, Zhang D (2016) Differential gene regulation of lipid synthesis in the developing seeds of two biodiesel tree species, Jatropha and Vernicia. Int J Agric Biol 18(6)

Yang H, Yu C, Yan J, Wang X, Chen F, Zhao Y, Wei W (2014) Overexpression of the Jatropha curcas JcERF1 gene coding an AP2/ERF-Type transcription factor increases tolerance to salt in transgenic tobacco. Biochemistry (Moscow) 79(11):1226–1236CrossRef

Ye J, Hong Y, Qu J, Wang C (2013) Improvement of Jatropha curcas oil by genetic transformation. In: Jatropha, challenges for a new energy crop. Springer, New York, pp 547–562

Ye J, Qu J, Mao HZ, Ma ZG, Rahman NE, Bai C, Chen W, Jiang SY, Ramachandran S, Chua NH (2014) Engineering geminivirus resistance in Jatropha curcas. Biotechnol Biofuels 7(1):149CrossRef

Yu N, Xiao WF, Zhu J, Chen XY, Peng CC (2015) The Jatropha curcas KASIII gene alters fatty acid composition of seeds in Arabidopsis thaliana. Biol Plant 59(4):773–782CrossRef

Yue GH, Sun F, Liu P (2013) Status of molecular breeding for improving Jatropha curcas and biodiesel. Renew Sustain Energy Rev 26:332–343CrossRef

Zampieri E, Chiapello M, Daghino S, Bonfante P, Mello A (2016) Soil metaproteomics reveals an inter-kingdom stress response to the presence of black truffles. Sci Rep 6

Title: “Omics Technologies” and Biodiesel Production
Authors: Reza Sharafi
Gholamreza Salehi Jouzani
Publisher: Springer International Publishing
Book: Biodiesel
Print ISBN: 978-3-030-00984-7

Electronic ISBN: 978-3-030-00985-4

Copyright Year: 2019
DOI: https://doi.org/10.1007/978-3-030-00985-4_10