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2014 | OriginalPaper | Chapter

Quantitative Approaches to Heterogeneity and Growth Variability in Cell Populations

Authors : Priscilla Macansantos, Vito Quaranta

Published in: Managing Complexity, Reducing Perplexity

Publisher: Springer International Publishing

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Abstract

Clonal heterogeneity in cell populations with respect to properties such as growth rate, motility, metabolism or signaling, has been observed for some time. Unraveling the dynamics and the mechanisms giving rise to such variability has been the goal of recent work, largely aided by quantitative/ mathematical tools. Quantitative evaluation of cell-to-cell variability (heterogeneity) poses technical challenges that only recently are being overcome. Clearly, a mathematical theory of cellular heterogeneity could have fundamental implications. For instance, a theory of cell population growth variability, coupled with experimental measurements, may in the long term be crucial for an in-depth understanding of physiological processes such as stem cell expansion, embryonic development, tissue regeneration, or of pathological ones (e.g., cancer, fibrosis, tissue degeneration). We focus on recent advances, both theoretical and experimental, in quantification and modeling of the clonal variability of proliferation rates within cell populations. Our aim is to highlight a few stimulating examples from this fledgling and exciting field, in order to frame the issue and point to challenges and opportunities that lie ahead. Furthermore, we emphasize work carried out in cancer-related systems.

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Literature
1.
go back to reference S.J. Altschuler, L.F. Wu, Cellular heterogeneity: do differences make a difference? Cell 141 (4), 63–559 (2010) S.J. Altschuler, L.F. Wu, Cellular heterogeneity: do differences make a difference? Cell 141 (4), 63–559 (2010)
2.
go back to reference S.C. Bendall, G.P. Nolan, From single cells to deep phenotypes in cancer. Nat. Biotechnol. 30(7), 47–639 (2012)CrossRef S.C. Bendall, G.P. Nolan, From single cells to deep phenotypes in cancer. Nat. Biotechnol. 30(7), 47–639 (2012)CrossRef
3.
go back to reference M. Chaves, T. Eissing, F. Allgöwer, Bistable biological systems: a characterization through local compact input-to-state stability. IEEE Trans. Autom. Control. (8ADNov.) 13(53), 87–100 (2008) M. Chaves, T. Eissing, F. Allgöwer, Bistable biological systems: a characterization through local compact input-to-state stability. IEEE Trans. Autom. Control. (8ADNov.) 13(53), 87–100 (2008)
4.
go back to reference A. Colman-Lerner, A. Gordon, E. Serra, T. Chin, O. Resnekov, D. Endy, et al. Regulated cell-to-cell variation in a cell-fate decision system. Nature 2005th ed. 437(7059), 699–706 (2005) A. Colman-Lerner, A. Gordon, E. Serra, T. Chin, O. Resnekov, D. Endy, et al. Regulated cell-to-cell variation in a cell-fate decision system. Nature 2005th ed. 437(7059), 699–706 (2005)
5.
go back to reference P. Gabriel, S.P. Garbett, V. Quaranta, D.R. Tyson, G.F. Webb, The contribution of age structure to cell population responses to targeted therapeutics. J. Theor. Biol. 311, 19–27 (2012)CrossRefMathSciNet P. Gabriel, S.P. Garbett, V. Quaranta, D.R. Tyson, G.F. Webb, The contribution of age structure to cell population responses to targeted therapeutics. J. Theor. Biol. 311, 19–27 (2012)CrossRefMathSciNet
6.
go back to reference J. Hasenauer, S. Waldherr, M. Doszczak, N. Radde, P. Scheurich, F. Allgöwer, Identification of models of heterogeneous cell populations from population snapshot data. BMC Bioinform. 12, 125 (2011)CrossRef J. Hasenauer, S. Waldherr, M. Doszczak, N. Radde, P. Scheurich, F. Allgöwer, Identification of models of heterogeneous cell populations from population snapshot data. BMC Bioinform. 12, 125 (2011)CrossRef
7.
go back to reference M. Hassanein, B. Weidow, E. Koehler, N. Bakane, S. Garbett, Y. Shyr et al. Development of high-throughput quantitative assays for glucose uptake in cancer cell lines. Mol. Imaging. Biol. 13(5), 52–840 (2011) M. Hassanein, B. Weidow, E. Koehler, N. Bakane, S. Garbett, Y. Shyr et al. Development of high-throughput quantitative assays for glucose uptake in cancer cell lines. Mol. Imaging. Biol. 13(5), 52–840 (2011)
8.
go back to reference C.J. Krebs, in The problem of abundance: Populations, ed. by B Cummings. Ecology: The Experimental Analysis of Distribution And Abundance, 6th edn. Benjamin/Cummings, Menlo Park, 2008), p. 111 C.J. Krebs, in The problem of abundance: Populations, ed. by B Cummings. Ecology: The Experimental Analysis of Distribution And Abundance, 6th edn. Benjamin/Cummings, Menlo Park, 2008), p. 111
9.
go back to reference N.V. Mantzaris, From single-cell genetic architecture to cell population dynamics: quantitatively decomposing the effects of different population heterogeneity sources for a genetic network with positive feedback architecture. Biophys. J. 92(12), 88–4271 (2007)CrossRef N.V. Mantzaris, From single-cell genetic architecture to cell population dynamics: quantitatively decomposing the effects of different population heterogeneity sources for a genetic network with positive feedback architecture. Biophys. J. 92(12), 88–4271 (2007)CrossRef
10.
go back to reference G.G. Powathil, K.E. Gordon, L.A. Hill, M.A.J. Chaplain, Modelling the effects of cellcycle heterogeneity on the response of a solid tumour to chemotherapy: biological insights from a hybrid multiscale cellular automaton model. J. Theor. Biol. 308, 1–19 (2012)CrossRefMathSciNet G.G. Powathil, K.E. Gordon, L.A. Hill, M.A.J. Chaplain, Modelling the effects of cellcycle heterogeneity on the response of a solid tumour to chemotherapy: biological insights from a hybrid multiscale cellular automaton model. J. Theor. Biol. 308, 1–19 (2012)CrossRefMathSciNet
11.
go back to reference V. Quaranta, K.A. Rejniak, P. Gerlee, Anderson AR. Invasion emerges from cancer cell adaptation to competitive microenvironments: quantitative predictions from multiscale mathematical models. Semin. Cancer Biol. 2008th ed. 18(5), 338–48 (2008) V. Quaranta, K.A. Rejniak, P. Gerlee, Anderson AR. Invasion emerges from cancer cell adaptation to competitive microenvironments: quantitative predictions from multiscale mathematical models. Semin. Cancer Biol. 2008th ed. 18(5), 338–48 (2008)
12.
go back to reference V. Quaranta, D.R. Tyson, S.P. Garbett, B. Weidow, M.P. Harris, W. Georgescu, Trait variability of cancer cells quantified by high-content automated microscopy of single cells. Meth. Enzymol. 467, 23–57 (2009)CrossRef V. Quaranta, D.R. Tyson, S.P. Garbett, B. Weidow, M.P. Harris, W. Georgescu, Trait variability of cancer cells quantified by high-content automated microscopy of single cells. Meth. Enzymol. 467, 23–57 (2009)CrossRef
13.
go back to reference D.K. Singh, C.-J. Ku, C. Wichaidit, R.J. Steininger, L.F. Wu, S.J. Altschuler, Patterns of basal signaling heterogeneity can distinguish cellular populations with different drug sensitivities. Mol. Syst. Biol. 6, 369 (2010)CrossRef D.K. Singh, C.-J. Ku, C. Wichaidit, R.J. Steininger, L.F. Wu, S.J. Altschuler, Patterns of basal signaling heterogeneity can distinguish cellular populations with different drug sensitivities. Mol. Syst. Biol. 6, 369 (2010)CrossRef
14.
go back to reference M.D. Slack, E.D. Martinez, L.F. Wu, S.J. Altschuler, Characterizing heterogeneous cellular responses to perturbations. Proc. Natl. Acad. Sci. USA 105(49), 11–19306 (2008)CrossRef M.D. Slack, E.D. Martinez, L.F. Wu, S.J. Altschuler, Characterizing heterogeneous cellular responses to perturbations. Proc. Natl. Acad. Sci. USA 105(49), 11–19306 (2008)CrossRef
15.
go back to reference B. Snijder, L. Pelkmans, Origins of regulated cell-to-cell variability. Nat. Rev. Mol. Cell Biol. 12(2), 25–119 (2011)CrossRef B. Snijder, L. Pelkmans, Origins of regulated cell-to-cell variability. Nat. Rev. Mol. Cell Biol. 12(2), 25–119 (2011)CrossRef
16.
go back to reference M. Stamatakis, K. Zygourakis, A mathematical and computational approach for integrating the major sources of cell population heterogeneity. J. Theor. Biol. 266(1), 41–61 (2010)CrossRefMathSciNet M. Stamatakis, K. Zygourakis, A mathematical and computational approach for integrating the major sources of cell population heterogeneity. J. Theor. Biol. 266(1), 41–61 (2010)CrossRefMathSciNet
17.
go back to reference D. Stockholm, R. Benchaouir, J. Picot, P. Rameau, T.M.A. Neildez, G. Landini et al., The origin of phenotypic heterogeneity in a clonal cell population in vitro. PLoS ONE 2(4), e394 (2007)CrossRef D. Stockholm, R. Benchaouir, J. Picot, P. Rameau, T.M.A. Neildez, G. Landini et al., The origin of phenotypic heterogeneity in a clonal cell population in vitro. PLoS ONE 2(4), e394 (2007)CrossRef
18.
go back to reference C. Tomelleri, E. Milotti, C. Dalla Pellegrina, O. Perbellini, A. Del Fabbro, M.T. Scupoli, A quantitative study of growth variability of tumour cell clones in vitro. Cell Prolif. 2008th ed. 41(1), 177–191 (2008) C. Tomelleri, E. Milotti, C. Dalla Pellegrina, O. Perbellini, A. Del Fabbro, M.T. Scupoli, A quantitative study of growth variability of tumour cell clones in vitro. Cell Prolif. 2008th ed. 41(1), 177–191 (2008)
19.
go back to reference D.R. Tyson, S.P. Garbett, P.L. Frick, V. Quaranta, Fractional proliferation: a method to deconvolve cell population dynamics from single-cell data. Nat. Methods 2012th ed. 9, 923–928 (2012) D.R. Tyson, S.P. Garbett, P.L. Frick, V. Quaranta, Fractional proliferation: a method to deconvolve cell population dynamics from single-cell data. Nat. Methods 2012th ed. 9, 923–928 (2012)
20.
go back to reference J.J. Tyson, B. Novak, Regulation of the eukaryotic cell cycle: molecular antagonism, hysteresis, and irreversible transitions. J. Theor. Biol. 210(2), 63–249 (2001)CrossRef J.J. Tyson, B. Novak, Regulation of the eukaryotic cell cycle: molecular antagonism, hysteresis, and irreversible transitions. J. Theor. Biol. 210(2), 63–249 (2001)CrossRef
21.
go back to reference H. Youssefpour, X. Li, A.D. Lander, J.S. Lowengrub, Multispecies model of cell lineages and feedback control in solid tumors. J. Theor. Biol. 304, 39–59 (2012)CrossRef H. Youssefpour, X. Li, A.D. Lander, J.S. Lowengrub, Multispecies model of cell lineages and feedback control in solid tumors. J. Theor. Biol. 304, 39–59 (2012)CrossRef
Metadata
Title
Quantitative Approaches to Heterogeneity and Growth Variability in Cell Populations
Authors
Priscilla Macansantos
Vito Quaranta
Copyright Year
2014
DOI
https://doi.org/10.1007/978-3-319-03759-2_2

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