Skip to main content
Top

2016 | OriginalPaper | Chapter

Stability-Weighted Matrix Completion of Incomplete Multi-modal Data for Disease Diagnosis

Authors : Kim-Han Thung, Ehsan Adeli, Pew-Thian Yap, Dinggang Shen

Published in: Medical Image Computing and Computer-Assisted Intervention – MICCAI 2016

Publisher: Springer International Publishing

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

Effective utilization of heterogeneous multi-modal data for Alzheimer’s Disease (AD) diagnosis and prognosis has always been hampered by incomplete data. One method to deal with this is low-rank matrix completion (LRMC), which simultaneous imputes missing data features and target values of interest. Although LRMC yields reasonable results, it implicitly weights features from all the modalities equally, ignoring the differences in discriminative power of features from different modalities. In this paper, we propose stability-weighted LRMC (swLRMC), an LRMC improvement that weights features and modalities according to their importance and reliability. We introduce a method, called stability weighting, to utilize subsampling techniques and outcomes from a range of hyper-parameters of sparse feature learning to obtain a stable set of weights. Incorporating these weights into LRMC, swLRMC can better account for differences in features and modalities for improving diagnosis. Experimental results confirm that the proposed method outperforms the conventional LRMC, feature-selection based LRMC, and other state-of-the-art methods.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Footnotes
Literature
1.
go back to reference Bergstra, J.S., et al.: Algorithms for hyper-parameter optimization. In: Proceedings of Advances in Neural Information Processing Systems, pp. 2546–2554 (2011) Bergstra, J.S., et al.: Algorithms for hyper-parameter optimization. In: Proceedings of Advances in Neural Information Processing Systems, pp. 2546–2554 (2011)
3.
go back to reference Goldberg, A., et al.: Transduction with matrix completion: three birds with one stone. In: Proceedings of Advances in Neural Information Processing Systems, vol. 23, pp. 757–765 (2010) Goldberg, A., et al.: Transduction with matrix completion: three birds with one stone. In: Proceedings of Advances in Neural Information Processing Systems, vol. 23, pp. 757–765 (2010)
4.
go back to reference Huang, L., Gao, Y., Jin, Y., Thung, K.-H., Shen, D.: Soft-split sparse regression based random forest for predicting future clinical scores of Alzheimer’s disease. In: Zhou, L., Wang, L., Wang, Q., Shi, Y. (eds.) MLMI 2015. LNCS, vol. 9352, pp. 246–254. Springer, Heidelberg (2015). doi:10.1007/978-3-319-24888-2_30 CrossRef Huang, L., Gao, Y., Jin, Y., Thung, K.-H., Shen, D.: Soft-split sparse regression based random forest for predicting future clinical scores of Alzheimer’s disease. In: Zhou, L., Wang, L., Wang, Q., Shi, Y. (eds.) MLMI 2015. LNCS, vol. 9352, pp. 246–254. Springer, Heidelberg (2015). doi:10.​1007/​978-3-319-24888-2_​30 CrossRef
5.
go back to reference Ingalhalikar, M., Parker, W.A., Bloy, L., Roberts, T.P.L., Verma, R.: Using multiparametric data with missing features for learning patterns of pathology. In: Ayache, N., Delingette, H., Golland, P., Mori, K. (eds.) MICCAI 2012. LNCS, vol. 7512, pp. 468–475. Springer, Heidelberg (2012)CrossRef Ingalhalikar, M., Parker, W.A., Bloy, L., Roberts, T.P.L., Verma, R.: Using multiparametric data with missing features for learning patterns of pathology. In: Ayache, N., Delingette, H., Golland, P., Mori, K. (eds.) MICCAI 2012. LNCS, vol. 7512, pp. 468–475. Springer, Heidelberg (2012)CrossRef
6.
go back to reference Jin, Y., et al.: Identification of infants at high-risk for autism spectrum disorder using multiparameter multiscale white matter connectivity networks. Hum. Brain Mapp. 36(12), 4880–4896 (2015)CrossRef Jin, Y., et al.: Identification of infants at high-risk for autism spectrum disorder using multiparameter multiscale white matter connectivity networks. Hum. Brain Mapp. 36(12), 4880–4896 (2015)CrossRef
7.
8.
go back to reference Qin, Y., et al.: Semi-parametric optimization for missing data imputation. Appl. Intell. 27(1), 79–88 (2007)CrossRefMATH Qin, Y., et al.: Semi-parametric optimization for missing data imputation. Appl. Intell. 27(1), 79–88 (2007)CrossRefMATH
9.
go back to reference Thung, K.H., et al.: Neurodegenerative disease diagnosis using incomplete multi-modality data via matrix shrinkage and completion. Neuroimage 91, 386–400 (2014)CrossRef Thung, K.H., et al.: Neurodegenerative disease diagnosis using incomplete multi-modality data via matrix shrinkage and completion. Neuroimage 91, 386–400 (2014)CrossRef
10.
go back to reference Thung, K.H., et al.: Identification of progressive mild cognitive impairment patients using incomplete longitudinal MRI scans. Brain Struct. Funct. pp. 1–17 (2015) Thung, K.H., et al.: Identification of progressive mild cognitive impairment patients using incomplete longitudinal MRI scans. Brain Struct. Funct. pp. 1–17 (2015)
11.
go back to reference Wang, Y., Nie, J., Yap, P.-T., Shi, F., Guo, L., Shen, D.: Robust deformable-surface-based skull-stripping for large-scale studies. In: Fichtinger, G., Martel, A., Peters, T. (eds.) MICCAI 2011. LNCS, vol. 6893, pp. 635–642. Springer, Heidelberg (2011). doi:10.1007/978-3-642-23626-6_78 CrossRef Wang, Y., Nie, J., Yap, P.-T., Shi, F., Guo, L., Shen, D.: Robust deformable-surface-based skull-stripping for large-scale studies. In: Fichtinger, G., Martel, A., Peters, T. (eds.) MICCAI 2011. LNCS, vol. 6893, pp. 635–642. Springer, Heidelberg (2011). doi:10.​1007/​978-3-642-23626-6_​78 CrossRef
12.
go back to reference Yuan, L., et al.: Multi-source feature learning for joint analysis of incomplete multiple heterogeneous neuroimaging data. NeuroImage 61(3), 622–632 (2012)CrossRef Yuan, L., et al.: Multi-source feature learning for joint analysis of incomplete multiple heterogeneous neuroimaging data. NeuroImage 61(3), 622–632 (2012)CrossRef
13.
go back to reference Zhu, X., et al.: Missing value estimation for mixed-attribute data sets. IEEE Trans. Knowl. Data Eng. 23(1), 110–121 (2011)CrossRef Zhu, X., et al.: Missing value estimation for mixed-attribute data sets. IEEE Trans. Knowl. Data Eng. 23(1), 110–121 (2011)CrossRef
14.
Metadata
Title
Stability-Weighted Matrix Completion of Incomplete Multi-modal Data for Disease Diagnosis
Authors
Kim-Han Thung
Ehsan Adeli
Pew-Thian Yap
Dinggang Shen
Copyright Year
2016
DOI
https://doi.org/10.1007/978-3-319-46723-8_11

Premium Partner