Skip to main content
Top

2020 | OriginalPaper | Chapter

Texture Analysis Based on Structural Co-occurrence Matrix Improves the Colorectal Tissue Characterization

Authors : Elias P. Medeiros, Daniel S. Ferreira, Geraldo L. B. Ramalho

Published in: Intelligent Systems

Publisher: Springer International Publishing

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

Colorectal cancer causes the deaths of thousands of people worldwide according to the World Health Organization. Automatic tissue recognition of histopathological images is essential for early disease diagnosis. Most research consists of employing texture descriptors to capture features that identify tumor samples. However, accurate multi-class classification is a challenge due to the complexity of colorectal tissue images. Recently, researchers have shown that the analysis of texture structural patterns degraded by image filtering provides valuable features for pre-diagnosis in several medical applications. Here we propose an approach to automatically classify eight types of colorectal tissues using Structural Co-occurrence Matrix. We carried on experiments on 5000 tissue patches from a public dataset to evaluate our algorithm, considering two scenarios: structural differences as a single descriptor, and combined with other characteristics. We found that our strategy improves the state-of-the-art, achieving, accuracy: 91.30%, precision: 91.41%, sensitivity: 91.31%, specificity: 98.76% e F1-score: 91.31%.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literature
1.
go back to reference Abdi, H., Williams, L.J.: Newman-Keuls test and Tukey test. In: Encyclopedia of Research Design, pp. 1–11. Sage, Thousand Oaks (2010) Abdi, H., Williams, L.J.: Newman-Keuls test and Tukey test. In: Encyclopedia of Research Design, pp. 1–11. Sage, Thousand Oaks (2010)
2.
go back to reference Altunbay, D., Cigir, C., Sokmensuer, C., Gunduz-Demir, C.: Color graphs for automated cancer diagnosis and grading. IEEE Trans. Biomed. Eng. 57(3), 665–674 (2009)CrossRef Altunbay, D., Cigir, C., Sokmensuer, C., Gunduz-Demir, C.: Color graphs for automated cancer diagnosis and grading. IEEE Trans. Biomed. Eng. 57(3), 665–674 (2009)CrossRef
3.
go back to reference Bianconi, F., Álvarez-Larrán, A., Fernández, A.: Discrimination between tumour epithelium and stroma via perception-based features. Neurocomputing 154, 119–126 (2015)CrossRef Bianconi, F., Álvarez-Larrán, A., Fernández, A.: Discrimination between tumour epithelium and stroma via perception-based features. Neurocomputing 154, 119–126 (2015)CrossRef
4.
go back to reference Burges, C.J.: A tutorial on support vector machines for pattern recognition. Data Min. Knowl. Disc. 2(2), 121–167 (1998)CrossRef Burges, C.J.: A tutorial on support vector machines for pattern recognition. Data Min. Knowl. Disc. 2(2), 121–167 (1998)CrossRef
5.
go back to reference Cardinal, R.N., Aitken, M.R.: ANOVA for the Behavioral Sciences Researcher. Psychology Press (2013) Cardinal, R.N., Aitken, M.R.: ANOVA for the Behavioral Sciences Researcher. Psychology Press (2013)
6.
go back to reference Cortes, C., Vapnik, V.: Support-vector networks. Mach. Learn. 20(3), 273–297 (1995)MATH Cortes, C., Vapnik, V.: Support-vector networks. Mach. Learn. 20(3), 273–297 (1995)MATH
7.
go back to reference Dunn, D., Higgins, W.E.: Optimal Gabor filters for texture segmentation. IEEE Trans. Image Process. 4(7), 947–964 (1995)CrossRef Dunn, D., Higgins, W.E.: Optimal Gabor filters for texture segmentation. IEEE Trans. Image Process. 4(7), 947–964 (1995)CrossRef
8.
go back to reference Fisher, R.A.: On the mathematical foundations of theoretical statistics. Philos. Trans. Roy. Soc. London Ser. A Containing Papers Math. Phys. Char. 222(594–604), 309–368 (1922) Fisher, R.A.: On the mathematical foundations of theoretical statistics. Philos. Trans. Roy. Soc. London Ser. A Containing Papers Math. Phys. Char. 222(594–604), 309–368 (1922)
9.
go back to reference Gurcan, M.N., Boucheron, L.E., Can, A., Madabhushi, A., Rajpoot, N.M., Yener, B.: Histopathological image analysis: a review. IEEE Rev. Biomed. Eng. 2, 147–171 (2009)CrossRef Gurcan, M.N., Boucheron, L.E., Can, A., Madabhushi, A., Rajpoot, N.M., Yener, B.: Histopathological image analysis: a review. IEEE Rev. Biomed. Eng. 2, 147–171 (2009)CrossRef
10.
go back to reference Haralick, R.M., Shanmugam, K., Dinstein, I.H.: Textural features for image classification. IEEE Trans. Syst. Man Cybern. 6, 610–621 (1973)CrossRef Haralick, R.M., Shanmugam, K., Dinstein, I.H.: Textural features for image classification. IEEE Trans. Syst. Man Cybern. 6, 610–621 (1973)CrossRef
11.
go back to reference Kalkan, H., Nap, M., Duin, R.P., Loog, M.: Automated classification of local patches in colon histopathology. In: Proceedings of the 21st International Conference on Pattern Recognition (ICPR2012), pp. 61–64. IEEE (2012) Kalkan, H., Nap, M., Duin, R.P., Loog, M.: Automated classification of local patches in colon histopathology. In: Proceedings of the 21st International Conference on Pattern Recognition (ICPR2012), pp. 61–64. IEEE (2012)
12.
go back to reference Kather, J.N., et al.: Multi-class texture analysis in colorectal cancer histology. Sci. Rep. 6, 27988 (2016)CrossRef Kather, J.N., et al.: Multi-class texture analysis in colorectal cancer histology. Sci. Rep. 6, 27988 (2016)CrossRef
13.
go back to reference Malik, F., Baharudin, B.: The statistical quantized histogram texture features analysis for image retrieval based on median and Laplacian filters in the DCT domain. Int. Arab J. Inf. Technol. 10(6), 1–9 (2013) Malik, F., Baharudin, B.: The statistical quantized histogram texture features analysis for image retrieval based on median and Laplacian filters in the DCT domain. Int. Arab J. Inf. Technol. 10(6), 1–9 (2013)
14.
go back to reference Mittal, H., Saraswat, M.: An automatic nuclei segmentation method using intelligent gravitational search algorithm based superpixel clustering. Swarm Evol. Comput. 45, 15–32 (2019)CrossRef Mittal, H., Saraswat, M.: An automatic nuclei segmentation method using intelligent gravitational search algorithm based superpixel clustering. Swarm Evol. Comput. 45, 15–32 (2019)CrossRef
15.
go back to reference Narváez, F., Díaz, G., Poveda, C., Romero, E.: An automatic BI-RADS description of mammographic masses by fusing multiresolution features. Expert Syst. Appl. 74, 82–95 (2017)CrossRef Narváez, F., Díaz, G., Poveda, C., Romero, E.: An automatic BI-RADS description of mammographic masses by fusing multiresolution features. Expert Syst. Appl. 74, 82–95 (2017)CrossRef
16.
go back to reference Panda, R.N., Baig, M.A., Panigrahi, B.K., Patro, M.R.: Efficient cad system based on GLCM & derived feature for diagnosing breast cancer. Int. J. Comput. Sci. Inf. Technol. 6, 3323–3327 (2015) Panda, R.N., Baig, M.A., Panigrahi, B.K., Patro, M.R.: Efficient cad system based on GLCM & derived feature for diagnosing breast cancer. Int. J. Comput. Sci. Inf. Technol. 6, 3323–3327 (2015)
17.
go back to reference Peixoto, S.A., Rebouças Filho, P.P.: Neurologist-level classification of stroke using a structural co-occurrence matrix based on the frequency domain. Comput. Electr. Eng. 71, 398–407 (2018)CrossRef Peixoto, S.A., Rebouças Filho, P.P.: Neurologist-level classification of stroke using a structural co-occurrence matrix based on the frequency domain. Comput. Electr. Eng. 71, 398–407 (2018)CrossRef
18.
go back to reference Pratt, W.K.: Digital Image Processing. A Wiley-Interscience Publication (1978) Pratt, W.K.: Digital Image Processing. A Wiley-Interscience Publication (1978)
19.
go back to reference PS, S.K., Dharun, V.: Extraction of texture features using GLCM and shape features using connected regions (2016) PS, S.K., Dharun, V.: Extraction of texture features using GLCM and shape features using connected regions (2016)
20.
go back to reference Rachapudi, V., Devi, G.L.: Improved convolutional neural network based histopathological image classification. Evol. Intell., 1–7 (2020) Rachapudi, V., Devi, G.L.: Improved convolutional neural network based histopathological image classification. Evol. Intell., 1–7 (2020)
21.
go back to reference Ramalho, G.L.B., Ferreira, D.S., Rebouças Filho, P.P., de Medeiros, F.N.S.: Rotation-invariant feature extraction using a structural co-occurrence matrix. Measurement 94, 406–415 (2016) Ramalho, G.L.B., Ferreira, D.S., Rebouças Filho, P.P., de Medeiros, F.N.S.: Rotation-invariant feature extraction using a structural co-occurrence matrix. Measurement 94, 406–415 (2016)
22.
go back to reference Reboucas Filho, P.P., Reboucas, E.D.S., Marinho, L.B., Sarmento, R.M., Tavares, J.M.R., de Albuquerque, V.H.C.: Analysis of human tissue densities: a new approach to extract features from medical images. Pattern Recogn. Lett. 94, 211–218 (2017) Reboucas Filho, P.P., Reboucas, E.D.S., Marinho, L.B., Sarmento, R.M., Tavares, J.M.R., de Albuquerque, V.H.C.: Analysis of human tissue densities: a new approach to extract features from medical images. Pattern Recogn. Lett. 94, 211–218 (2017)
23.
go back to reference Rebouças Filho, P.P., et al.: Automatic histologically-closer classification of skin lesions. Comput. Med. Imaging Graph. 68, 40–54 (2018) Rebouças Filho, P.P., et al.: Automatic histologically-closer classification of skin lesions. Comput. Med. Imaging Graph. 68, 40–54 (2018)
24.
go back to reference Rokach, L., Maimon, O.: Top-down induction of decision trees classifiers-a survey. IEEE Trans. Syst. Man Cybern. Part C (Appl. Rev.) 35(4), 476–487 (2005) Rokach, L., Maimon, O.: Top-down induction of decision trees classifiers-a survey. IEEE Trans. Syst. Man Cybern. Part C (Appl. Rev.) 35(4), 476–487 (2005)
25.
go back to reference dos Santos, L.F.S., Neves, L.A., Rozendo, G.B., Ribeiro, M.G., do Nascimento, M.Z., Tosta, T.A.A.: Multidimensional and fuzzy sample entropy (SampEn Mf) for quantifying h&e histological images of colorectal cancer. Comput. Biol. Med. 103, 148–160 (2018) dos Santos, L.F.S., Neves, L.A., Rozendo, G.B., Ribeiro, M.G., do Nascimento, M.Z., Tosta, T.A.A.: Multidimensional and fuzzy sample entropy (SampEn Mf) for quantifying h&e histological images of colorectal cancer. Comput. Biol. Med. 103, 148–160 (2018)
26.
go back to reference Society, A.C.: Colorectal Cancer Facts & Figures 2017–2019. American Cancer Society, Atlanta (2017) Society, A.C.: Colorectal Cancer Facts & Figures 2017–2019. American Cancer Society, Atlanta (2017)
27.
go back to reference Tamura, H., Mori, S., Yamawaki, T.: Textural features corresponding to visual perception. IEEE Trans. Syst. Man Cybern. 8(6), 460–473 (1978)CrossRef Tamura, H., Mori, S., Yamawaki, T.: Textural features corresponding to visual perception. IEEE Trans. Syst. Man Cybern. 8(6), 460–473 (1978)CrossRef
28.
go back to reference Wang, C., Shi, J., Zhang, Q., Ying, S.: Histopathological image classification with bilinear convolutional neural networks. In: 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), pp. 4050–4053. IEEE (2017) Wang, C., Shi, J., Zhang, Q., Ying, S.: Histopathological image classification with bilinear convolutional neural networks. In: 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), pp. 4050–4053. IEEE (2017)
29.
go back to reference Wang, L., He, D.C.: Texture classification using texture spectrum. Pattern Recogn. 23(8), 905–910 (1990)CrossRef Wang, L., He, D.C.: Texture classification using texture spectrum. Pattern Recogn. 23(8), 905–910 (1990)CrossRef
Metadata
Title
Texture Analysis Based on Structural Co-occurrence Matrix Improves the Colorectal Tissue Characterization
Authors
Elias P. Medeiros
Daniel S. Ferreira
Geraldo L. B. Ramalho
Copyright Year
2020
DOI
https://doi.org/10.1007/978-3-030-61377-8_23

Premium Partner