Skip to main content
Top

2023 | OriginalPaper | Chapter

U-Shaped Xception-Residual Network for Polyps Region Segmentation

Authors : Pallabi Sharma, Bunil Kumar Balabantary, P. Rangababu

Published in: Proceedings of International Conference on Frontiers in Computing and Systems

Publisher: Springer Nature Singapore

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

Segmenting the region of interest helps gastroenterologists for removing polyps during the surgery in the gastrointestinal tract. We propose a segmentation system to segment the area of the polyp from the informative frames. Informative frames are the frames that contain at least a polyp in colonoscopy still frames. Our proposed U-shaped convolution neural network model utilizes the concept of residual connection and Xception as a backbone structure. We consider colonoscopy still frames as input to the segmentation model and achieved a Dice and Jaccard score of 86.3 and 79, respectively. It outperformed the conventional U-net with a 3.7% performance gain with respect to Dice score. This proposed method can be used as a reliable alternative system to identify a region of polyps during colonoscopy analysis.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literature
1.
go back to reference Chollet F (2017) Xception: deep learning with depthwise separable convolutions. In: Proceedings of the IEEE conference on computer vision and pattern recognition, pp 1251–1258 Chollet F (2017) Xception: deep learning with depthwise separable convolutions. In: Proceedings of the IEEE conference on computer vision and pattern recognition, pp 1251–1258
3.
go back to reference Deng J, Dong W, Socher R, Li L-J, Li K, Fei-Fei L (2009) Imagenet: a large-scale hierarchical image database. In: 2009 IEEE conference on computer vision and pattern recognition. IEEE, pp 248–255 Deng J, Dong W, Socher R, Li L-J, Li K, Fei-Fei L (2009) Imagenet: a large-scale hierarchical image database. In: 2009 IEEE conference on computer vision and pattern recognition. IEEE, pp 248–255
4.
go back to reference Graham S, Chen H, Gamper J, Dou Q, Heng P-A, Snead D, Tsang YW, Rajpoot N (2019) Mild-net: minimal information loss dilated network for gland instance segmentation in colon histology images. Med Image Anal 52:199–211CrossRef Graham S, Chen H, Gamper J, Dou Q, Heng P-A, Snead D, Tsang YW, Rajpoot N (2019) Mild-net: minimal information loss dilated network for gland instance segmentation in colon histology images. Med Image Anal 52:199–211CrossRef
5.
go back to reference Sornapudi S, Meng F, Yi S (2019) Region-based automated localization of colonoscopy and wireless capsule endoscopy polyps. Appl Sci 9(12):2404CrossRef Sornapudi S, Meng F, Yi S (2019) Region-based automated localization of colonoscopy and wireless capsule endoscopy polyps. Appl Sci 9(12):2404CrossRef
6.
go back to reference Mahmud T, Paul B, Fattah SA (2021) Polypsegnet: A modified encoder-decoder architecture for automated polyp segmentation from colonoscopy images. Comput Biol Med 128:104119CrossRef Mahmud T, Paul B, Fattah SA (2021) Polypsegnet: A modified encoder-decoder architecture for automated polyp segmentation from colonoscopy images. Comput Biol Med 128:104119CrossRef
7.
go back to reference Zhang L, Dolwani S, Ye X (2017) Automated polyp segmentation in colonoscopy frames using fully convolutional neural network and Textons. In: Annual conference on medical image understanding and analysis. Springer, pp 707–717 Zhang L, Dolwani S, Ye X (2017) Automated polyp segmentation in colonoscopy frames using fully convolutional neural network and Textons. In: Annual conference on medical image understanding and analysis. Springer, pp 707–717
8.
go back to reference Kang J, Gwak J (2019) Ensemble of instance segmentation models for polyp segmentation in colonoscopy images. IEEE Access 7:26440–26447CrossRef Kang J, Gwak J (2019) Ensemble of instance segmentation models for polyp segmentation in colonoscopy images. IEEE Access 7:26440–26447CrossRef
9.
go back to reference Brandao P, Mazomenos E, Ciuti G, Caliò R, Bianchi F, Menciassi A, Dario P, Koulaouzidis A, Arezzo A, Stoyanov D (2017) Fully convolutional neural networks for polyp segmentation in colonoscopy. In: Medical imaging 2017: computer-aided diagnosis, vol 10134. International Society for Optics and Photonics, p 101340F Brandao P, Mazomenos E, Ciuti G, Caliò R, Bianchi F, Menciassi A, Dario P, Koulaouzidis A, Arezzo A, Stoyanov D (2017) Fully convolutional neural networks for polyp segmentation in colonoscopy. In: Medical imaging 2017: computer-aided diagnosis, vol 10134. International Society for Optics and Photonics, p 101340F
10.
go back to reference Ronneberger O, Fischer P, Brox T (2015) U-net: convolutional networks for biomedical image segmentation. In: International conference on medical image computing and computer-assisted intervention. Springer, pp 234–241 Ronneberger O, Fischer P, Brox T (2015) U-net: convolutional networks for biomedical image segmentation. In: International conference on medical image computing and computer-assisted intervention. Springer, pp 234–241
11.
go back to reference Jha D, Smedsrud PH, Riegler MA, Halvorsen P, de Lange T, Johansen D, Johansen HD (202) Kvasir-seg: a segmented polyp dataset. In: International conference on multimedia modeling. Springer, pp 451–462 Jha D, Smedsrud PH, Riegler MA, Halvorsen P, de Lange T, Johansen D, Johansen HD (202) Kvasir-seg: a segmented polyp dataset. In: International conference on multimedia modeling. Springer, pp 451–462
12.
go back to reference Kasugai K, Balabantaray BK, Sharma P, Bora K (2020) Two stage classification with CNN for colorectal cancer detection. Oncologie 22(3):129–145CrossRef Kasugai K, Balabantaray BK, Sharma P, Bora K (2020) Two stage classification with CNN for colorectal cancer detection. Oncologie 22(3):129–145CrossRef
14.
go back to reference Jha D, Smedsrud PH, Johansen D, de Lange T, Johansen HD, Halvorsen P, Riegler MA (2021) A comprehensive study on colorectal polyp segmentation with resunet++, conditional random field and test-time augmentation. IEEE J Biomed Health Inform 25(6):2029–2040CrossRef Jha D, Smedsrud PH, Johansen D, de Lange T, Johansen HD, Halvorsen P, Riegler MA (2021) A comprehensive study on colorectal polyp segmentation with resunet++, conditional random field and test-time augmentation. IEEE J Biomed Health Inform 25(6):2029–2040CrossRef
15.
go back to reference Jha D, Ali S, Tomar NK, Johansen HD, Johansen D, Rittscher J, Riegler MA, Halvorsen P (2021) Real-time polyp detection, localization and segmentation in colonoscopy using deep learning. IEEE Access 9:40496–40510CrossRef Jha D, Ali S, Tomar NK, Johansen HD, Johansen D, Rittscher J, Riegler MA, Halvorsen P (2021) Real-time polyp detection, localization and segmentation in colonoscopy using deep learning. IEEE Access 9:40496–40510CrossRef
16.
go back to reference Akbari M, Mohrekesh M, Nasr-Esfahani E, Soroushmehr SR, Karimi N, Samavi S, Najarian K (2018) Polyp segmentation in colonoscopy images using fully convolutional network. In: 2018 40th annual international conference of the IEEE engineering in medicine and biology society (EMBC). IEEE, pp 69–72 Akbari M, Mohrekesh M, Nasr-Esfahani E, Soroushmehr SR, Karimi N, Samavi S, Najarian K (2018) Polyp segmentation in colonoscopy images using fully convolutional network. In: 2018 40th annual international conference of the IEEE engineering in medicine and biology society (EMBC). IEEE, pp 69–72
17.
go back to reference Zhou Z, Siddiquee MMR, Tajbakhsh N, Liang J (2019) Unet++: redesigning skip connections to exploit multiscale features in image segmentation. IEEE Trans Med Imaging 39(6):1856–1867CrossRef Zhou Z, Siddiquee MMR, Tajbakhsh N, Liang J (2019) Unet++: redesigning skip connections to exploit multiscale features in image segmentation. IEEE Trans Med Imaging 39(6):1856–1867CrossRef
Metadata
Title
U-Shaped Xception-Residual Network for Polyps Region Segmentation
Authors
Pallabi Sharma
Bunil Kumar Balabantary
P. Rangababu
Copyright Year
2023
Publisher
Springer Nature Singapore
DOI
https://doi.org/10.1007/978-981-19-0105-8_25