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Published in: Artificial Intelligence Review 4/2020

03-08-2019

A survey of feature extraction and fusion of deep learning for detection of abnormalities in video endoscopy of gastrointestinal-tract

Authors: Hussam Ali, Muhammad Sharif, Mussarat Yasmin, Mubashir Husain Rehmani, Farhan Riaz

Published in: Artificial Intelligence Review | Issue 4/2020

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Abstract

A standard screening procedure involves video endoscopy of the Gastrointestinal tract. It is a less invasive method which is practiced for early diagnosis of gastric diseases. Manual inspection of a large number of gastric frames is an exhaustive, time-consuming task, and requires expertise. Conversely, several computer-aided diagnosis systems have been proposed by researchers to cope with the dilemma of manual inspection of the massive volume of frames. This article gives an overview of different available alternatives for automated inspection, detection, and classification of various GI abnormalities. Also, this work elaborates techniques associated with content-based image retrieval and automated systems for summarizing endoscopic procedures. In this survey, we perform a comprehensive review of feature extraction techniques and deep learning methods which were specifically developed for automatic analysis of endoscopic videos. In addition, we categorize features extraction techniques according to image processing domains and further we classify them based on their visual descriptions. We also review hybrid feature extraction techniques which are developed by the fusion of different kind of basic descriptors. Moreover, this survey covers various endoscopy data-sets available for the bench-marking of vision based algorithms. On the basis of literature, we explain emerging trends in computerized analysis of endoscopy. We also survey important issues, challenges, and future research directions to the development of computer-assisted systems for detection of maladies and interactive surgery in the GI tract.

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Literature
go back to reference Adler S, Hassan C, Metzger Y, Sompolinsky Y, Spada C (2012) Accuracy of automatic detection of small-bowel mucosa by second-generation colon capsule endoscopy. Gastrointest Endosc 76(6):1170–1174 Adler S, Hassan C, Metzger Y, Sompolinsky Y, Spada C (2012) Accuracy of automatic detection of small-bowel mucosa by second-generation colon capsule endoscopy. Gastrointest Endosc 76(6):1170–1174
go back to reference Ahn J, Loc HN, Balan RK, Lee Y, Ko J (2018) Finding small-bowel lesions: challenges in endoscopy-image-based learning systems. Computer 51(5):68–76 Ahn J, Loc HN, Balan RK, Lee Y, Ko J (2018) Finding small-bowel lesions: challenges in endoscopy-image-based learning systems. Computer 51(5):68–76
go back to reference Albisser Z (2015) Computer-aided screening of capsule endoscopy videos. Ph.D. Dissertation, University of Oslo Albisser Z (2015) Computer-aided screening of capsule endoscopy videos. Ph.D. Dissertation, University of Oslo
go back to reference Alexandre L, Casteleiro J, Nobre N (2007) Polyp detection in endoscopic video using SVMs. In: 11th european conference on principles and practice of knowledge discovery in databases KPKDD, vol 4702, pp 358–365 Alexandre L, Casteleiro J, Nobre N (2007) Polyp detection in endoscopic video using SVMs. In: 11th european conference on principles and practice of knowledge discovery in databases KPKDD, vol 4702, pp 358–365
go back to reference Alexandre LA, Nobre N, Casteleiro J (2008) Color and position versus texture features for endoscopic polyp detection. In: 1st International conference on biomedical engineering and informatics: new development and the future, BMEI, vol 2, pp 38–42 Alexandre LA, Nobre N, Casteleiro J (2008) Color and position versus texture features for endoscopic polyp detection. In: 1st International conference on biomedical engineering and informatics: new development and the future, BMEI, vol 2, pp 38–42
go back to reference Ali H, Sharif M, Yasmin M, Rehmani MH (2017) Computer-based classification of chromoendoscopy images using homogeneous texture descriptors. Comput Biol Med 88:84–92 Ali H, Sharif M, Yasmin M, Rehmani MH (2017) Computer-based classification of chromoendoscopy images using homogeneous texture descriptors. Comput Biol Med 88:84–92
go back to reference Ameling S, Wirth S, Paulus D, Lacey G, Vilarino F (2009) Texture-based polyp detection in colonoscopy. In: Bildverarbeitung für die Medizin, pp 346–350 Ameling S, Wirth S, Paulus D, Lacey G, Vilarino F (2009) Texture-based polyp detection in colonoscopy. In: Bildverarbeitung für die Medizin, pp 346–350
go back to reference André B, Vercauteren T, Perchant A, Buchner AM, Wallace MB, Ayache N (2010) Introducing space and time in local feature-based endomicroscopic image retrieval, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 5853 LNC, pp 18–30 André B, Vercauteren T, Perchant A, Buchner AM, Wallace MB, Ayache N (2010) Introducing space and time in local feature-based endomicroscopic image retrieval, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 5853 LNC, pp 18–30
go back to reference Anselmi F, Evangelopoulos G, Rosasco L, Poggio T (2017) Symmetry regularization. CBMM Memo 063, June 2017 Anselmi F, Evangelopoulos G, Rosasco L, Poggio T (2017) Symmetry regularization. CBMM Memo 063, June 2017
go back to reference Arnab A, Zheng S, Jayasumana S, Romera-paredes B, Kirillov A, Savchynskyy B, Rother C, Kahl F, Torr P (2018) Conditional random fields meet deep neural networks for semantic segmentation XX(Xx):1–15 Arnab A, Zheng S, Jayasumana S, Romera-paredes B, Kirillov A, Savchynskyy B, Rother C, Kahl F, Torr P (2018) Conditional random fields meet deep neural networks for semantic segmentation XX(Xx):1–15
go back to reference Axon A (2008) Is diagnostic and therapeutic endoscopy currently appropriate? Suggestions for improvement. Best Pract Res Clin Gastroenterol 22(5):959–970 Axon A (2008) Is diagnostic and therapeutic endoscopy currently appropriate? Suggestions for improvement. Best Pract Res Clin Gastroenterol 22(5):959–970
go back to reference Badrinarayanan V, Kendall A, Cipolla R (2017) Segnet: a deep convolutional encoder-decoder architecture for image segmentation. IEEE Trans Pattern Anal Mach Intell 39(12):2481–2495 Badrinarayanan V, Kendall A, Cipolla R (2017) Segnet: a deep convolutional encoder-decoder architecture for image segmentation. IEEE Trans Pattern Anal Mach Intell 39(12):2481–2495
go back to reference Bao G, Pahlavan K, Mi L (2015) Hybrid localization of microrobotic endoscopic capsule inside small intestine by data fusion of vision and RF sensors. IEEE Sens J 15(5):2669–2678 Bao G, Pahlavan K, Mi L (2015) Hybrid localization of microrobotic endoscopic capsule inside small intestine by data fusion of vision and RF sensors. IEEE Sens J 15(5):2669–2678
go back to reference Barbosa D, Ramos J, Lima CS (2008) Detection of small bowel tumors in capsule endoscopy frames using texture analysis based on the discrete wavelet transform. In: Annual international conference of the IEEE engineering in medicine and biology society, EMBS, pp 3012–3015 Barbosa D, Ramos J, Lima CS (2008) Detection of small bowel tumors in capsule endoscopy frames using texture analysis based on the discrete wavelet transform. In: Annual international conference of the IEEE engineering in medicine and biology society, EMBS, pp 3012–3015
go back to reference Barbosa DJ, Ramos J, Correia JH, Lima CS (2009) Automatic detection of small bowel tumors in capsule endoscopy based on color curvelet covariance statistical texture descriptors. In: Annual international conference of the IEEE on engineering in medicine and biology society, pp 6683–6686 Barbosa DJ, Ramos J, Correia JH, Lima CS (2009) Automatic detection of small bowel tumors in capsule endoscopy based on color curvelet covariance statistical texture descriptors. In: Annual international conference of the IEEE on engineering in medicine and biology society, pp 6683–6686
go back to reference Beg S, Ragunath K (2015) Image-enhanced endoscopy technology in the gastrointestinal tract: What is available? Best Pract Res Clin Gastroenterol 29(4):627–638 Beg S, Ragunath K (2015) Image-enhanced endoscopy technology in the gastrointestinal tract: What is available? Best Pract Res Clin Gastroenterol 29(4):627–638
go back to reference Bejakovic S, Kumar R, Dassopoulos T, Mullin G, Hager G (2009) Analysis of Crohn’s disease lesions in capsule endoscopy images. In: IEEE international conference on robotics and automation, pp 2793–2798 Bejakovic S, Kumar R, Dassopoulos T, Mullin G, Hager G (2009) Analysis of Crohn’s disease lesions in capsule endoscopy images. In: IEEE international conference on robotics and automation, pp 2793–2798
go back to reference Bhat YM, Abu Dayyeh BK, Chauhan SS, Gottlieb KT, Hwang JH, Komanduri S, Konda V, Lo SK, Manfredi MA, Maple JT et al (2014) High-definition and high-magnification endoscopes. Gastrointest Endosc 80(6):919–927 Bhat YM, Abu Dayyeh BK, Chauhan SS, Gottlieb KT, Hwang JH, Komanduri S, Konda V, Lo SK, Manfredi MA, Maple JT et al (2014) High-definition and high-magnification endoscopes. Gastrointest Endosc 80(6):919–927
go back to reference Bonnel J, Khademi A, Krishnan S, Ioana C (2009) Small bowel image classification using cross-co-occurrence matrices on wavelet domain. Biomed Sig Process Control 4(1):7–15 Bonnel J, Khademi A, Krishnan S, Ioana C (2009) Small bowel image classification using cross-co-occurrence matrices on wavelet domain. Biomed Sig Process Control 4(1):7–15
go back to reference Boschetto D, Mirzaei H, Leong RWL, Tarroni G, Grisan E (2015) Semiautomatic detection of villi in confocal endoscopy for the evaluation of celiac disease. In: Annual international conference of the IEEE engineering in medicine and biology society, EMBS, pp 8143–8146 Boschetto D, Mirzaei H, Leong RWL, Tarroni G, Grisan E (2015) Semiautomatic detection of villi in confocal endoscopy for the evaluation of celiac disease. In: Annual international conference of the IEEE engineering in medicine and biology society, EMBS, pp 8143–8146
go back to reference Boschetto D, Di Claudio G, Mirzaei H, Leong R, Grisan E (2016) Automatic classification of small bowel mucosa alterations in celiac disease for confocal laser endomicroscopy. In: SPIE medical imaging, vol. 9788. International Society for Optics and Photonics, pp.978 809–978 809 Boschetto D, Di Claudio G, Mirzaei H, Leong R, Grisan E (2016) Automatic classification of small bowel mucosa alterations in celiac disease for confocal laser endomicroscopy. In: SPIE medical imaging, vol. 9788. International Society for Optics and Photonics, pp.978 809–978 809
go back to reference Buchner AM, Shahid MW, Heckman MG, Krishna M, Ghabril M, Hasan M, Crook JE, Gomez V, Raimondo M, Woodward T, Wolfsen HC, Wallace MB (2010) Comparison of Probe-Based Confocal Laser Endomicroscopy With Virtual Chromoendoscopy for Classification of Colon Polyps. Gastroenterology 138(3):834–842 Buchner AM, Shahid MW, Heckman MG, Krishna M, Ghabril M, Hasan M, Crook JE, Gomez V, Raimondo M, Woodward T, Wolfsen HC, Wallace MB (2010) Comparison of Probe-Based Confocal Laser Endomicroscopy With Virtual Chromoendoscopy for Classification of Colon Polyps. Gastroenterology 138(3):834–842
go back to reference Callacondo-Riva D, Ganoza-Salas A, Anicama-Lima W, Quispe-Mauricio A, Longacre TA (2009) Primary squamous cell carcinoma of the stomach with paraneoplastic leukocytosis: a case report and review of literature. Hum Pathol 40(10):1494–1498 Callacondo-Riva D, Ganoza-Salas A, Anicama-Lima W, Quispe-Mauricio A, Longacre TA (2009) Primary squamous cell carcinoma of the stomach with paraneoplastic leukocytosis: a case report and review of literature. Hum Pathol 40(10):1494–1498
go back to reference Carpi F, Kastelein N, Talcott M, Pappone C (2011) Magnetically controllable gastrointestinal steering of video capsules. IEEE Trans Biomed Eng 58(2):231–234 Carpi F, Kastelein N, Talcott M, Pappone C (2011) Magnetically controllable gastrointestinal steering of video capsules. IEEE Trans Biomed Eng 58(2):231–234
go back to reference Charisis V, Tsiligiri A, Hadjileontiadis LJ, Liatsos CN, Mavrogiannis CC, Sergiadis GD (2010) Ulcer detection in wireless capsule endoscopy images using bidimensional nonlinear analysis. In: Annual international conference of the IEEE on engineering in medicine and biology society (EMBC), pp 236–239 Charisis V, Tsiligiri A, Hadjileontiadis LJ, Liatsos CN, Mavrogiannis CC, Sergiadis GD (2010) Ulcer detection in wireless capsule endoscopy images using bidimensional nonlinear analysis. In: Annual international conference of the IEEE on engineering in medicine and biology society (EMBC), pp 236–239
go back to reference Cho WY, Jang JY, Lee DH (2011) Recent advances in image-enhanced endoscopy. Clin Endosc 44(2):65–75 Cho WY, Jang JY, Lee DH (2011) Recent advances in image-enhanced endoscopy. Clin Endosc 44(2):65–75
go back to reference Choi BI (2014) Radiology illustrated: gastrointestinal tract, vol 2. Springer, Berlin Choi BI (2014) Radiology illustrated: gastrointestinal tract, vol 2. Springer, Berlin
go back to reference Chu QD, Zibari GB, Gibbs JF (2015) Surgical oncology: a practical and comprehensive approach. Surgical Oncology a Practical and Comprehensive Approach, pp 3–678 Chu QD, Zibari GB, Gibbs JF (2015) Surgical oncology: a practical and comprehensive approach. Surgical Oncology a Practical and Comprehensive Approach, pp 3–678
go back to reference Ciaccio EJ, Tennyson CA, Lewis SK, Bhagat G, Green PH (2010) T1199 distinguishing patients with celiac disease by quantitative analysis of videocapsule endoscopy images. Gastroenterology 138(5):S510 Ciaccio EJ, Tennyson CA, Lewis SK, Bhagat G, Green PH (2010) T1199 distinguishing patients with celiac disease by quantitative analysis of videocapsule endoscopy images. Gastroenterology 138(5):S510
go back to reference Cobrin GM, Pittman RH, Lewis BS (2006) Increased diagnostic yield of small bowel tumors with capsule endoscopy. Cancer 107(1):22–27 Cobrin GM, Pittman RH, Lewis BS (2006) Increased diagnostic yield of small bowel tumors with capsule endoscopy. Cancer 107(1):22–27
go back to reference Coda S (2014) An investigation of the diagnostic potential of autofluorescence lifetime spectroscopy and imaging for label-free contrast of disease. Ph.D. dissertation, Thesis submitted for the award of Doctor of Philosophy (Ph.D.) Imperial College of Science, Technology and Medicine Coda S (2014) An investigation of the diagnostic potential of autofluorescence lifetime spectroscopy and imaging for label-free contrast of disease. Ph.D. dissertation, Thesis submitted for the award of Doctor of Philosophy (Ph.D.) Imperial College of Science, Technology and Medicine
go back to reference Cohen T, Welling M (2016) Group equivariant convolutional networks. in: International conference on machine learning, pp 2990–2999 Cohen T, Welling M (2016) Group equivariant convolutional networks. in: International conference on machine learning, pp 2990–2999
go back to reference Coimbra MT, Cunha JS (2006) MPEG-7 visual descriptors–contributions for automated feature extraction in capsule endoscopy. IEEE Trans Circuits Syst Video Technol 16(5):628–637 Coimbra MT, Cunha JS (2006) MPEG-7 visual descriptors–contributions for automated feature extraction in capsule endoscopy. IEEE Trans Circuits Syst Video Technol 16(5):628–637
go back to reference Coimbra M, Campos P, Cunha JS (2006) Topographic segmentation and transit time estimation for endoscopic capsule exams. In: IEEE international conference on acoustics, speech and signal processing, ICASSP, vol 2, pp II–II Coimbra M, Campos P, Cunha JS (2006) Topographic segmentation and transit time estimation for endoscopic capsule exams. In: IEEE international conference on acoustics, speech and signal processing, ICASSP, vol 2, pp II–II
go back to reference Cong Y, Wang S, Liu J, Cao J, Yang Y, Luo J (2015) Deep sparse feature selection for computer aided endoscopy diagnosis. Pattern Recognit 48:907–917 Cong Y, Wang S, Liu J, Cao J, Yang Y, Luo J (2015) Deep sparse feature selection for computer aided endoscopy diagnosis. Pattern Recognit 48:907–917
go back to reference Cong Y, Wang S, Fan B, Yang Y, Yu H (2016) UDSFS: Unsupervised deep sparse feature selection. Neurocomputing 196:150–158 Cong Y, Wang S, Fan B, Yang Y, Yu H (2016) UDSFS: Unsupervised deep sparse feature selection. Neurocomputing 196:150–158
go back to reference Constantinescu AF, Ionescu M, Rogoveanu I, Ciurea ME, Streba CT, Iovanescu VF, Artene SA, Vere CC (2015) Analysis of wireless capsule endoscopy images using local binary patterns. Appl Med Inf 36(2):31 Constantinescu AF, Ionescu M, Rogoveanu I, Ciurea ME, Streba CT, Iovanescu VF, Artene SA, Vere CC (2015) Analysis of wireless capsule endoscopy images using local binary patterns. Appl Med Inf 36(2):31
go back to reference Cui L, Hu C, Zou Y, Meng MQH (2010) Bleeding detection in wireless capsule endoscopy images by support vector classifier. In: IEEE International conference on information and automation, ICIA, pp 1746–1751 Cui L, Hu C, Zou Y, Meng MQH (2010) Bleeding detection in wireless capsule endoscopy images by support vector classifier. In: IEEE International conference on information and automation, ICIA, pp 1746–1751
go back to reference Dahal A, Oh J, Tavanapong W, Wong J, De Groen PC (2015) Detection of ulcerative colitis severity in colonoscopy video frames. In: International workshop on content-based multimedia indexing Dahal A, Oh J, Tavanapong W, Wong J, De Groen PC (2015) Detection of ulcerative colitis severity in colonoscopy video frames. In: International workshop on content-based multimedia indexing
go back to reference Dattamajumdar AK, Blount PL, Myers JA, Proctor AH, Goldman BH, Reid BJ, Martin RW (2001) A low-cost fiber-optic instrument to colorimetrically detect patients with Barrett’s esophagus for early detection of esophageal adenocarcinoma. IEEE Trans Biomed Eng 48(6):695–705 Dattamajumdar AK, Blount PL, Myers JA, Proctor AH, Goldman BH, Reid BJ, Martin RW (2001) A low-cost fiber-optic instrument to colorimetrically detect patients with Barrett’s esophagus for early detection of esophageal adenocarcinoma. IEEE Trans Biomed Eng 48(6):695–705
go back to reference Deng L, Yu D et al (2014) Deep learning: methods and applications, Foundations and trends®. Signal Process 7(3–4):197–387 Deng L, Yu D et al (2014) Deep learning: methods and applications, Foundations and trends®. Signal Process 7(3–4):197–387
go back to reference Dieleman S, De Fauw J, Kavukcuoglu K (2016) Exploiting cyclic symmetry in convolutional neural networks. arXiv preprint arXiv:1602.02660 Dieleman S, De Fauw J, Kavukcuoglu K (2016) Exploiting cyclic symmetry in convolutional neural networks. arXiv preprint arXiv:​1602.​02660
go back to reference Dong Y, Tao D, Li X (2015a) Nonnegative multiresolution representation-based texture image classification. ACM Tran Intell Syst Technol (TIST) 7(1):4 Dong Y, Tao D, Li X (2015a) Nonnegative multiresolution representation-based texture image classification. ACM Tran Intell Syst Technol (TIST) 7(1):4
go back to reference Dong Y, Tao D, Li X, Ma J, Pu J (2015b) Texture classification and retrieval using shearlets and linear regression. IEEE Trans Cybern 45(3):358–369 Dong Y, Tao D, Li X, Ma J, Pu J (2015b) Texture classification and retrieval using shearlets and linear regression. IEEE Trans Cybern 45(3):358–369
go back to reference Dong Y, Feng J, Liang L, Zheng L, Wu Q (2017) Multiscale sampling based texture image classification. IEEE Signal Process Lett 24(5):614–618 Dong Y, Feng J, Liang L, Zheng L, Wu Q (2017) Multiscale sampling based texture image classification. IEEE Signal Process Lett 24(5):614–618
go back to reference Dong Y, Feng J, Yang C, Wang X, Zheng L, Pu J (2018a) Multi-scale counting and difference representation for texture classification. Vis Comput 34(10):1315–1324 Dong Y, Feng J, Yang C, Wang X, Zheng L, Pu J (2018a) Multi-scale counting and difference representation for texture classification. Vis Comput 34(10):1315–1324
go back to reference Drozdzal M, Seguí S, Radeva P, Malagelada C, Azpiroz F, Vitrià J (2015) Motility bar: a new tool for motility analysis of endoluminal videos. Comput Biol Med 65:320–330 Drozdzal M, Seguí S, Radeva P, Malagelada C, Azpiroz F, Vitrià J (2015) Motility bar: a new tool for motility analysis of endoluminal videos. Comput Biol Med 65:320–330
go back to reference Dunaeva O, Edelsbrunner H, Lukyanov A, Machin M, Malkova D (2015) The classification of endoscopy images with persistent homology. In: 16th International symposium on symbolic and numeric algorithms for scientific computing, SYNASC. Elsevier, pp 565–570 Dunaeva O, Edelsbrunner H, Lukyanov A, Machin M, Malkova D (2015) The classification of endoscopy images with persistent homology. In: 16th International symposium on symbolic and numeric algorithms for scientific computing, SYNASC. Elsevier, pp 565–570
go back to reference Eberlein T, Reid B, Hawk E (2002) Report of the stomach/esophageal cancers progress review group. National Cancer Institute, Bethesda, MD Eberlein T, Reid B, Hawk E (2002) Report of the stomach/esophageal cancers progress review group. National Cancer Institute, Bethesda, MD
go back to reference Eliakim R (2004) Wireless capsule video endoscopy: three years of experience. World J Gastroenterol 10(9):1238–1239 Eliakim R (2004) Wireless capsule video endoscopy: three years of experience. World J Gastroenterol 10(9):1238–1239
go back to reference Emam AZ, Ali YA, Ben Ismail MM (2015) Adaptive features extraction for capsule endoscopy (CE) video summarization. In: International conference on computer vision and image analysis applications, ICCVIA Emam AZ, Ali YA, Ben Ismail MM (2015) Adaptive features extraction for capsule endoscopy (CE) video summarization. In: International conference on computer vision and image analysis applications, ICCVIA
go back to reference Figueiredo IN, Figueiredo PN, Stadler G, Ghattas O, Araujo A (2010) Variational image segmentation for endoscopic human colonic aberrant crypt foci. IEEE Trans Biomed Eng 29(4):998–1011 Figueiredo IN, Figueiredo PN, Stadler G, Ghattas O, Araujo A (2010) Variational image segmentation for endoscopic human colonic aberrant crypt foci. IEEE Trans Biomed Eng 29(4):998–1011
go back to reference Filip D, Yadid-Pecht O, Andrews CN, Mintchev MP (2011) Self-stabilizing colonic capsule endoscopy: pilot study of acute canine models. IEEE Trans Med Imaging 30(12):2115–2125 Filip D, Yadid-Pecht O, Andrews CN, Mintchev MP (2011) Self-stabilizing colonic capsule endoscopy: pilot study of acute canine models. IEEE Trans Med Imaging 30(12):2115–2125
go back to reference Francisco SIM, Sousa RG, Coimbra MT (2015) Recognition of Cancer using random forests as a bag-of-words approach for gastroenterology. Ph.D. Dissertation, Masters thesis, Universidade do Porto, 2015. (Cited on pages 77 and 78) Francisco SIM, Sousa RG, Coimbra MT (2015) Recognition of Cancer using random forests as a bag-of-words approach for gastroenterology. Ph.D. Dissertation, Masters thesis, Universidade do Porto, 2015. (Cited on pages 77 and 78)
go back to reference Gao M, Hu C, Chen Z, Liu S, Zhang H (2009) Finite-difference modeling of micromachine for use in gastrointestinal endoscopy. IEEE Trans Biomed Eng 56(10):2413–2419 Gao M, Hu C, Chen Z, Liu S, Zhang H (2009) Finite-difference modeling of micromachine for use in gastrointestinal endoscopy. IEEE Trans Biomed Eng 56(10):2413–2419
go back to reference Garcia E, Hermoza R, Castanon CB, Cano L, Castillo M, Castanñeda C (2017) Automatic lymphocyte detection on gastric cancer IHC images using deep learning. In: IEEE 30th international symposium on computer-based medical systems (CBMS). IEEE, pp 200–204 Garcia E, Hermoza R, Castanon CB, Cano L, Castillo M, Castanñeda C (2017) Automatic lymphocyte detection on gastric cancer IHC images using deep learning. In: IEEE 30th international symposium on computer-based medical systems (CBMS). IEEE, pp 200–204
go back to reference Gastelum A, Mata L, Brito-de-la Fuente E, Delmas P, Vicente W, Salinas-Vázquez M, Ascanio G, Marquez J (2015) Building a three-dimensional model of the upper gastrointestinal tract for computer simulations of swallowing. Med Biol Eng Comput 54:525–534 Gastelum A, Mata L, Brito-de-la Fuente E, Delmas P, Vicente W, Salinas-Vázquez M, Ascanio G, Marquez J (2015) Building a three-dimensional model of the upper gastrointestinal tract for computer simulations of swallowing. Med Biol Eng Comput 54:525–534
go back to reference Geng Y, Pahlavan K (2015) On the accuracy of RF and image processing based hybrid localization for wireless capsule endoscopy. In: IEEE wireless communications and networking conference (WCNC), pp 464–469 Geng Y, Pahlavan K (2015) On the accuracy of RF and image processing based hybrid localization for wireless capsule endoscopy. In: IEEE wireless communications and networking conference (WCNC), pp 464–469
go back to reference Gens R, Domingos PM (2014) Deep symmetry networks. In: Advances in neural information processing systems, pp. 2537–2545 Gens R, Domingos PM (2014) Deep symmetry networks. In: Advances in neural information processing systems, pp. 2537–2545
go back to reference Gholami S, Janson L, Worhunsky DJ, Tran TB, Squires MH, Jin LX, Spolverato G, Votanopoulos KI, Schmidt C, Weber SM, Bloomston M, Cho CS, Levine EA, Fields RC, Pawlik TM, Maithel SK, Efron B, Norton JA, Poultsides GA (2015) Number of lymph nodes removed and survival after gastric cancer resection: an analysis from the US Gastric Cancer Collaborative. J Am Coll Surg 221(2):291–299 Gholami S, Janson L, Worhunsky DJ, Tran TB, Squires MH, Jin LX, Spolverato G, Votanopoulos KI, Schmidt C, Weber SM, Bloomston M, Cho CS, Levine EA, Fields RC, Pawlik TM, Maithel SK, Efron B, Norton JA, Poultsides GA (2015) Number of lymph nodes removed and survival after gastric cancer resection: an analysis from the US Gastric Cancer Collaborative. J Am Coll Surg 221(2):291–299
go back to reference Ghosh T, Fattah S, Shahnaz C, Kundu A, Rizve M (2015) Block based histogram feature extraction method for bleeding detection in wireless capsule endoscopy. In: IEEE eegion 10 conference TENCON. IEEE, pp 1–4 Ghosh T, Fattah S, Shahnaz C, Kundu A, Rizve M (2015) Block based histogram feature extraction method for bleeding detection in wireless capsule endoscopy. In: IEEE eegion 10 conference TENCON. IEEE, pp 1–4
go back to reference Ghosh T, Fattah SA, Wahid KA (2017) CHOBS: color histogram of block statistics for automatic bleeding detection in wireless capsule endoscopy video. IEEE J Transl Eng Health Med 6:1–12 Ghosh T, Fattah SA, Wahid KA (2017) CHOBS: color histogram of block statistics for automatic bleeding detection in wireless capsule endoscopy video. IEEE J Transl Eng Health Med 6:1–12
go back to reference Gibson E, Giganti F, Hu Y, Bonmati E, Bandula S, Gurusamy K, Davidson B, Pereira SP, Clarkson MJ, Barratt DC (2018) Automatic multi-organ segmentation on abdominal CT with dense v-networks. IEEE Trans Med Imaging 37(8):1822–1834 Gibson E, Giganti F, Hu Y, Bonmati E, Bandula S, Gurusamy K, Davidson B, Pereira SP, Clarkson MJ, Barratt DC (2018) Automatic multi-organ segmentation on abdominal CT with dense v-networks. IEEE Trans Med Imaging 37(8):1822–1834
go back to reference Girgis HZ, Mitchell BR, Dassopoulos T, Mullin G, Hager G (2010) An intelligent system to detect Crohn’s disease inflammation in wireless capsule endoscopy videos. In: 7th IEEE international symposium on biomedical imaging: from nano to macro, ISBI, pp 1373–1376 Girgis HZ, Mitchell BR, Dassopoulos T, Mullin G, Hager G (2010) An intelligent system to detect Crohn’s disease inflammation in wireless capsule endoscopy videos. In: 7th IEEE international symposium on biomedical imaging: from nano to macro, ISBI, pp 1373–1376
go back to reference Giritharan B, Yuan X, Liu J, Buckles B, Oh J, Tang SJ (2008) Bleeding detection from capsule endoscopy videos. In: 30th Annual international conference of the IEEE in engineering in medicine and biology society, EMBS, pp 4780–4783 Giritharan B, Yuan X, Liu J, Buckles B, Oh J, Tang SJ (2008) Bleeding detection from capsule endoscopy videos. In: 30th Annual international conference of the IEEE in engineering in medicine and biology society, EMBS, pp 4780–4783
go back to reference Goetz M, Malek NP, Kiesslich R (2013) Microscopic imaging in endoscopy: endomicroscopy and endocytoscopy. Nat Rev Gastroenterol Hepatol 11(1):11–18 Goetz M, Malek NP, Kiesslich R (2013) Microscopic imaging in endoscopy: endomicroscopy and endocytoscopy. Nat Rev Gastroenterol Hepatol 11(1):11–18
go back to reference Gómez V, Buchner AM, Dekker E, Van Den Broek FJC, Meining A, Shahid MW, Ghabril MS, Fockens P, Heckman MG, Wallace MB (2010) Interobserver agreement and accuracy among international experts with probe-based confocal laser endomicroscopy in predicting colorectal neoplasia. Endoscopy 42(4):286–291 Gómez V, Buchner AM, Dekker E, Van Den Broek FJC, Meining A, Shahid MW, Ghabril MS, Fockens P, Heckman MG, Wallace MB (2010) Interobserver agreement and accuracy among international experts with probe-based confocal laser endomicroscopy in predicting colorectal neoplasia. Endoscopy 42(4):286–291
go back to reference Gono K, Obi T, Yamaguchi M, Ohyama N, Machida H, Sano Y, Yoshida S, Hamamoto Y, Endo T (2004) Appearance of enhanced tissue features in narrow-band endoscopic imaging. J Biomed Opt 9(3):568 Gono K, Obi T, Yamaguchi M, Ohyama N, Machida H, Sano Y, Yoshida S, Hamamoto Y, Endo T (2004) Appearance of enhanced tissue features in narrow-band endoscopic imaging. J Biomed Opt 9(3):568
go back to reference Gotoda T, Uedo N, Yoshinaga S, Tanuma T, Morita Y, Doyama H, Aso A, Hirasawa T, Yano T, Uchita K et al (2016) Basic principles and practice of gastric cancer screening using high-definition white-light gastroscopy: eyes can only see what the brain knows. Dig Endosc 28(S1):2–15 Gotoda T, Uedo N, Yoshinaga S, Tanuma T, Morita Y, Doyama H, Aso A, Hirasawa T, Yano T, Uchita K et al (2016) Basic principles and practice of gastric cancer screening using high-definition white-light gastroscopy: eyes can only see what the brain knows. Dig Endosc 28(S1):2–15
go back to reference Gross S, Stehle T, Behrens A, Auer R, Aach T, Winograd R, Trautwein C, Tischendorf J (2009) A comparison of blood vessel features and local binary patterns for colorectal polyp classification. In: SPIE medical imaging. International Society for Optics and Photonics, pp 72 602Q–72 602Q Gross S, Stehle T, Behrens A, Auer R, Aach T, Winograd R, Trautwein C, Tischendorf J (2009) A comparison of blood vessel features and local binary patterns for colorectal polyp classification. In: SPIE medical imaging. International Society for Optics and Photonics, pp 72 602Q–72 602Q
go back to reference Gschwandtner M, Liedlgruber M, Uhl A, Vecsei A (2010) Experimental study on the impact of endoscope distortion correction on computer-assisted celiac disease diagnosis. In: 10th IEEE international conference on information technology and applications in biomedicine, ITAB, pp 1–6 Gschwandtner M, Liedlgruber M, Uhl A, Vecsei A (2010) Experimental study on the impact of endoscope distortion correction on computer-assisted celiac disease diagnosis. In: 10th IEEE international conference on information technology and applications in biomedicine, ITAB, pp 1–6
go back to reference Gu Y, Xie X, Li G, Sun T, Wang D, Yin Z, Zhang P, Wang Z (2015) Design of endoscopic capsule with multiple cameras. IEEE Trans Biomed Circuits Syst 9(4):590–602 Gu Y, Xie X, Li G, Sun T, Wang D, Yin Z, Zhang P, Wang Z (2015) Design of endoscopic capsule with multiple cameras. IEEE Trans Biomed Circuits Syst 9(4):590–602
go back to reference Gueye L, Yildirim-Yayilgan S, Cheikh FA, Balasingham I (2015) Automatic detection of colonoscopic anomalies using capsule endoscopy. In: IEEE International conference on image processing (ICIP), pp 1061–1064 Gueye L, Yildirim-Yayilgan S, Cheikh FA, Balasingham I (2015) Automatic detection of colonoscopic anomalies using capsule endoscopy. In: IEEE International conference on image processing (ICIP), pp 1061–1064
go back to reference Guo Y, Liu Y, Georgiou T, Lew MS (2017) A review of semantic segmentation using deep neural networks. Int J Multimed Inf Retr 7(2):87–93 Guo Y, Liu Y, Georgiou T, Lew MS (2017) A review of semantic segmentation using deep neural networks. Int J Multimed Inf Retr 7(2):87–93
go back to reference Häfner M, Kendlbacher C, Mann W, Taferl W, Wrba F, Gangl A, Vécsei A, Uhl A (2007) PIT pattern classification of zoom-endoscopic colon images using histogram techniques. In: 7th nordic signal processing symposium, NORSIG 2006, pp 58–61 Häfner M, Kendlbacher C, Mann W, Taferl W, Wrba F, Gangl A, Vécsei A, Uhl A (2007) PIT pattern classification of zoom-endoscopic colon images using histogram techniques. In: 7th nordic signal processing symposium, NORSIG 2006, pp 58–61
go back to reference Häfner M, Kwitt R, Wrba F, Gangl A, Uhl A (2008) One-against-one classification for zoom-endoscopy images. In: 4th IET international conference on advances in medical, signal and information processing, (MEDSIP), pp 4–7 Häfner M, Kwitt R, Wrba F, Gangl A, Uhl A (2008) One-against-one classification for zoom-endoscopy images. In: 4th IET international conference on advances in medical, signal and information processing, (MEDSIP), pp 4–7
go back to reference Häfner M, Gangl A, Liedlgruber M, Uhl A, Vécsei A, Wrba F (2009a) Combining Gaussian Markov random fields with the discrete wavelet transform for endoscopic image classification. In: 16th International conference on digital signal processing, DSP, pp 1–6 Häfner M, Gangl A, Liedlgruber M, Uhl A, Vécsei A, Wrba F (2009a) Combining Gaussian Markov random fields with the discrete wavelet transform for endoscopic image classification. In: 16th International conference on digital signal processing, DSP, pp 1–6
go back to reference Häfner M, Kwitt R, Uhl A, Gangl A, Wrba F, Vécsei A (2009b) Feature extraction from multi-directional multi-resolution image transformations for the classification of zoom-endoscopy images. Pattern Anal Appl 12(4):407–413MathSciNet Häfner M, Kwitt R, Uhl A, Gangl A, Wrba F, Vécsei A (2009b) Feature extraction from multi-directional multi-resolution image transformations for the classification of zoom-endoscopy images. Pattern Anal Appl 12(4):407–413MathSciNet
go back to reference Häfner M, Kwitt R, Uhl A, Wrba F, Gangl A, Vécsei A (2009c) Computer-assisted pit-pattern classification in different wavelet domains for supporting dignity assessment of colonic polyps. Pattern Recognit 42(6):1180–1191 Häfner M, Kwitt R, Uhl A, Wrba F, Gangl A, Vécsei A (2009c) Computer-assisted pit-pattern classification in different wavelet domains for supporting dignity assessment of colonic polyps. Pattern Recognit 42(6):1180–1191
go back to reference Hafner M, Brunauer L, Payer H, Resch R, Gangl A, Uhl A, Wrba F, Vécsei A (2010a) Computer-aided classification of zoom-endoscopical images using fourier filters. IEEE Trans Inf Technol Biomed 14(4):958–970 Hafner M, Brunauer L, Payer H, Resch R, Gangl A, Uhl A, Wrba F, Vécsei A (2010a) Computer-aided classification of zoom-endoscopical images using fourier filters. IEEE Trans Inf Technol Biomed 14(4):958–970
go back to reference Hafner M, Uhl A, Vecsei A, Wimmer G, Wrba F (2010b) Complex wavelet transform variants and discrete cosine transform for scale invariance in magnification-endoscopy image classification. In: 10th IEEE international conference on information technology and applications in biomedicine, pp 1–5 Hafner M, Uhl A, Vecsei A, Wimmer G, Wrba F (2010b) Complex wavelet transform variants and discrete cosine transform for scale invariance in magnification-endoscopy image classification. In: 10th IEEE international conference on information technology and applications in biomedicine, pp 1–5
go back to reference Häfner M, Tamaki T, Tanaka S, Uhl A, Wimmer G, Yoshida S (2015) Local fractal dimension based approaches for colonic polyp classification. Med Image Anal 26(1):92–107 Häfner M, Tamaki T, Tanaka S, Uhl A, Wimmer G, Yoshida S (2015) Local fractal dimension based approaches for colonic polyp classification. Med Image Anal 26(1):92–107
go back to reference Hamashima C, Shabana M, Okada K, Okamoto M, Osaki Y (2015) Mortality reduction from gastric cancer by endoscopic and radiographic screening. Cancer Sci 106(12):1744–1749 Hamashima C, Shabana M, Okada K, Okamoto M, Osaki Y (2015) Mortality reduction from gastric cancer by endoscopic and radiographic screening. Cancer Sci 106(12):1744–1749
go back to reference Hassan AR, Haque MA (2015) Computer-aided gastrointestinal hemorrhage detection in wireless capsule endoscopy videos. Comput Methods Programs Biomed 122(3):341–353 Hassan AR, Haque MA (2015) Computer-aided gastrointestinal hemorrhage detection in wireless capsule endoscopy videos. Comput Methods Programs Biomed 122(3):341–353
go back to reference Hazewinkel Y, López-Cerón M, East JE, Rastogi A, Pellisé M, Nakajima T, Van Eeden S, Tytgat KMAJ, Fockens P, Dekker E (2013) Endoscopic features of sessile serrated adenomas: validation by international experts using high-resolution white-light endoscopy and narrow-band imaging. Gastrointest Endosc 77(6):916–924 Hazewinkel Y, López-Cerón M, East JE, Rastogi A, Pellisé M, Nakajima T, Van Eeden S, Tytgat KMAJ, Fockens P, Dekker E (2013) Endoscopic features of sessile serrated adenomas: validation by international experts using high-resolution white-light endoscopy and narrow-band imaging. Gastrointest Endosc 77(6):916–924
go back to reference He J-Y, Wu X, Jiang Y-G, Peng Q, Jain R (2018) Hookworm detection in wireless capsule endoscopy images with deep learning. IEEE Trans Image Process 27(5):1MathSciNetMATH He J-Y, Wu X, Jiang Y-G, Peng Q, Jain R (2018) Hookworm detection in wireless capsule endoscopy images with deep learning. IEEE Trans Image Process 27(5):1MathSciNetMATH
go back to reference Hegenbart S, Uhl A, Vécsei A (2015) Survey on computer aided decision support for diagnosis of celiac disease. Comput Biol Med 65:348–358 Hegenbart S, Uhl A, Vécsei A (2015) Survey on computer aided decision support for diagnosis of celiac disease. Comput Biol Med 65:348–358
go back to reference Hirasawa T, Aoyama K, Tanimoto T, Ishihara S, Shichijo S, Ozawa T, Ohnishi T, Fujishiro M, Matsuo K, Fujisaki J et al (2018) Application of artificial intelligence using a convolutional neural network for detecting gastric cancer in endoscopic images. Gastric Cancer 21(4):653–660 Hirasawa T, Aoyama K, Tanimoto T, Ishihara S, Shichijo S, Ozawa T, Ohnishi T, Fujishiro M, Matsuo K, Fujisaki J et al (2018) Application of artificial intelligence using a convolutional neural network for detecting gastric cancer in endoscopic images. Gastric Cancer 21(4):653–660
go back to reference Huang C-R, Chung P-C, Sheu B-S, Kuo H-J (2008) Helicobacter pylori-related gastric histology classification using support-vector-machine-based feature selection. IEEE Trans Inf Technol Biomed 12(4):523–531 Huang C-R, Chung P-C, Sheu B-S, Kuo H-J (2008) Helicobacter pylori-related gastric histology classification using support-vector-machine-based feature selection. IEEE Trans Inf Technol Biomed 12(4):523–531
go back to reference Huang C-R, Chen Y-T, Chen W-Y, Cheng H-C, Sheu B-S (2015) Gastroesophageal reflux disease diagnosis using hierarchical heterogeneous descriptor fusion support vector machine. IEEE Trans Biomed Eng PP(99):1 Huang C-R, Chen Y-T, Chen W-Y, Cheng H-C, Sheu B-S (2015) Gastroesophageal reflux disease diagnosis using hierarchical heterogeneous descriptor fusion support vector machine. IEEE Trans Biomed Eng PP(99):1
go back to reference Hurlstone DP, Cross SS, Adam I, Shorthouse AJ, Brown S, Sanders DS, Lobo AJ (2004) Efficacy of high magnification chromoscopic colonoscopy for the diagnosis of neoplasia in flat and depressed lesions of the colorectum: a prospective analysis. Gut 53(2):284–90 Hurlstone DP, Cross SS, Adam I, Shorthouse AJ, Brown S, Sanders DS, Lobo AJ (2004) Efficacy of high magnification chromoscopic colonoscopy for the diagnosis of neoplasia in flat and depressed lesions of the colorectum: a prospective analysis. Gut 53(2):284–90
go back to reference Hu Z, Tang J, Wang Z, Zhang K, Zhang L, Sun Q (2018) Deep learning for image-based cancer detection and diagnosis—a survey. Pattern Recognit 83:134–149 Hu Z, Tang J, Wang Z, Zhang K, Zhang L, Sun Q (2018) Deep learning for image-based cancer detection and diagnosis—a survey. Pattern Recognit 83:134–149
go back to reference Hwang S, Celebi ME (2010) Polyp detection in wireless capsule endoscopy video based on image segmentations and geometric feature. In: IEEE international conference on acoustics speech and signal processing, (ICASSP), vol 7, pp 678–681 Hwang S, Celebi ME (2010) Polyp detection in wireless capsule endoscopy video based on image segmentations and geometric feature. In: IEEE international conference on acoustics speech and signal processing, (ICASSP), vol 7, pp 678–681
go back to reference Hwang S, Oh J, Tavanapong W, Wong J, De Groen PC (2007) Polyp detection in colonoscopy video using elliptical shape feature. In: International conference on image processing, ICIP, vol 2, pp 465–468 Hwang S, Oh J, Tavanapong W, Wong J, De Groen PC (2007) Polyp detection in colonoscopy video using elliptical shape feature. In: International conference on image processing, ICIP, vol 2, pp 465–468
go back to reference Iakovidis DK, Maroulis DE, Karkanis SA, Brokos A (2005) A comparative study of texture features for the discrimination of gastric polyps in endoscopic video. In: IEEE Symposium on computer-based medical systems, pp 575–580 Iakovidis DK, Maroulis DE, Karkanis SA, Brokos A (2005) A comparative study of texture features for the discrimination of gastric polyps in endoscopic video. In: IEEE Symposium on computer-based medical systems, pp 575–580
go back to reference Iakovidis DK, Maroulis DE, Karkanis SA (2006) An intelligent system for automatic detection of gastrointestinal adenomas in video endoscopy. Comput Biol Med 36(10):1084–1103 Iakovidis DK, Maroulis DE, Karkanis SA (2006) An intelligent system for automatic detection of gastrointestinal adenomas in video endoscopy. Comput Biol Med 36(10):1084–1103
go back to reference Iakovidis DK, Chatzis D, Chrysanthopoulos P, Koulaouzidis A (2015) Blood detection in wireless capsule endoscope images based on salient superpixels. In: Annual international conference of the IEEE engineering in medicine and biology society (EMBS), pp 731–734 Iakovidis DK, Chatzis D, Chrysanthopoulos P, Koulaouzidis A (2015) Blood detection in wireless capsule endoscope images based on salient superpixels. In: Annual international conference of the IEEE engineering in medicine and biology society (EMBS), pp 731–734
go back to reference Iakovidis DK, Georgakopoulos SV, Vasilakakis M, Koulaouzidis A, Plagianakos VP (2018) Detecting and locating gastrointestinal anomalies using deep learning and iterative cluster unification. IEEE Trans Med Imaging 37(10):2196–2210 Iakovidis DK, Georgakopoulos SV, Vasilakakis M, Koulaouzidis A, Plagianakos VP (2018) Detecting and locating gastrointestinal anomalies using deep learning and iterative cluster unification. IEEE Trans Med Imaging 37(10):2196–2210
go back to reference Ishihara K, Ogawa T, Haseyama M (2016) Helicobacter pylori infection detection from gastric X-ray images using KLFDA-based decision fusion. In: IEEE 4th global conference on consumer electronics, GCCE, pp 204–205 Ishihara K, Ogawa T, Haseyama M (2016) Helicobacter pylori infection detection from gastric X-ray images using KLFDA-based decision fusion. In: IEEE 4th global conference on consumer electronics, GCCE, pp 204–205
go back to reference Janse MHA, van der Sommen F, Zinger S, Schoon EJ, de With PHN (2016) Early esophageal cancer detection using RF classifiers. In: Proceedings of SPIE 9785, vol 9785, pp 97 851D-1–8 Janse MHA, van der Sommen F, Zinger S, Schoon EJ, de With PHN (2016) Early esophageal cancer detection using RF classifiers. In: Proceedings of SPIE 9785, vol 9785, pp 97 851D-1–8
go back to reference Jensen DM, Ohning GV, Kovacs TOG, Ghassemi KA, Jutabha R, Dulai GS, Machicado GA (2016) Doppler endoscopic probe as a guide to risk stratification and definitive hemostasis of peptic ulcer bleeding. Gastrointest Endosc 83:129–136 Jensen DM, Ohning GV, Kovacs TOG, Ghassemi KA, Jutabha R, Dulai GS, Machicado GA (2016) Doppler endoscopic probe as a guide to risk stratification and definitive hemostasis of peptic ulcer bleeding. Gastrointest Endosc 83:129–136
go back to reference Jung YS, Kim YH, Lee DH, Kim JH (2008) Active blood detection in a high resolution capsule endoscopy using color spectrum transformation. In: International conference on biomedical engineering and informatics: new development and the future, BMEI 2008, vol 1, pp 859–862 Jung YS, Kim YH, Lee DH, Kim JH (2008) Active blood detection in a high resolution capsule endoscopy using color spectrum transformation. In: International conference on biomedical engineering and informatics: new development and the future, BMEI 2008, vol 1, pp 859–862
go back to reference Kainuma M, Furusyo N, Urita Y, Nagata M, Ihara T, Oji T (2015) The association between objective tongue color and endoscopic findings: results from the Kyushu and Okinawa population study (KOPS). BMC Complement Altern Med 15:372–379 Kainuma M, Furusyo N, Urita Y, Nagata M, Ihara T, Oji T (2015) The association between objective tongue color and endoscopic findings: results from the Kyushu and Okinawa population study (KOPS). BMC Complement Altern Med 15:372–379
go back to reference Kainz P, Pfeiffer M, Urschler M (2017) Segmentation and classification of colon glands with deep convolutional neural networks and total variation regularization. PeerJ 5:e3874 Kainz P, Pfeiffer M, Urschler M (2017) Segmentation and classification of colon glands with deep convolutional neural networks and total variation regularization. PeerJ 5:e3874
go back to reference Kaltenbach T, Sano Y, Friedland S, Soetikno R (2008) American gastroenterological association (AGA) institute technology assessment on image-enhanced endoscopy. Gastroenterology 134(1):327–340 Kaltenbach T, Sano Y, Friedland S, Soetikno R (2008) American gastroenterological association (AGA) institute technology assessment on image-enhanced endoscopy. Gastroenterology 134(1):327–340
go back to reference Kang J, Doraiswami R (2003) Real-time image processing system for endoscopic applications. In: Canadian conference on electrical and computer engineering CCECE, toward a caring and humane technology, vol 3, pp 1469–1472 Kang J, Doraiswami R (2003) Real-time image processing system for endoscopic applications. In: Canadian conference on electrical and computer engineering CCECE, toward a caring and humane technology, vol 3, pp 1469–1472
go back to reference Karargyris A, Bourbakis N (2009a) Identification of polyps in wireless capsule endoscopy videos using Log Gabor filters. In: IEEE/NIH life science systems and applications workshop, LiSSA, pp 143–147 Karargyris A, Bourbakis N (2009a) Identification of polyps in wireless capsule endoscopy videos using Log Gabor filters. In: IEEE/NIH life science systems and applications workshop, LiSSA, pp 143–147
go back to reference Karargyris A, Bourbakis N (2009b) Identification of ulcers in wireless capsule endoscopy videos. In: IEEE international symposium on biomedical imaging: from nano to macro, ISBI, no. 3, pp 554–557 Karargyris A, Bourbakis N (2009b) Identification of ulcers in wireless capsule endoscopy videos. In: IEEE international symposium on biomedical imaging: from nano to macro, ISBI, no. 3, pp 554–557
go back to reference Karkanis SA, Iakovidis DK, Karras D, Maroulis D (2001) Detection of lesions in endoscopic video using textural descriptors on wavelet domain supported by artificial neural network architectures. IEEE Int Conf Image Process 2:833–836 Karkanis SA, Iakovidis DK, Karras D, Maroulis D (2001) Detection of lesions in endoscopic video using textural descriptors on wavelet domain supported by artificial neural network architectures. IEEE Int Conf Image Process 2:833–836
go back to reference Kato M, Kaise M, Yonezawa J, Toyoizumi H, Yoshimura N, Yoshida Y, Kawamura M, Tajiri H (2010) Magnifying endoscopy with narrow-band imaging achieves superior accuracy in the differential diagnosis of superficial gastric lesions identified with white-light endoscopy: a prospective study. Gastrointest Endosc 72(3):523–529 Kato M, Kaise M, Yonezawa J, Toyoizumi H, Yoshimura N, Yoshida Y, Kawamura M, Tajiri H (2010) Magnifying endoscopy with narrow-band imaging achieves superior accuracy in the differential diagnosis of superficial gastric lesions identified with white-light endoscopy: a prospective study. Gastrointest Endosc 72(3):523–529
go back to reference Kelley JR, Duggan JM (2003) Gastric cancer epidemiology and risk factors. J Clin Epidemiol 56(1):1–9 Kelley JR, Duggan JM (2003) Gastric cancer epidemiology and risk factors. J Clin Epidemiol 56(1):1–9
go back to reference Keuchel M, Kurniawan N, Baltes P, Bandorski D, Koulaouzidis A (2015) Quantitative measurements in capsule endoscopy. Comput Biol Med 65:333–347 Keuchel M, Kurniawan N, Baltes P, Bandorski D, Koulaouzidis A (2015) Quantitative measurements in capsule endoscopy. Comput Biol Med 65:333–347
go back to reference Khan TH, Wahid KA (2014) White and narrow band image compressor based on a new color space for capsule endoscopy. Signal Process Image Commun 29(3):345–360 Khan TH, Wahid KA (2014) White and narrow band image compressor based on a new color space for capsule endoscopy. Signal Process Image Commun 29(3):345–360
go back to reference Khashab MA, El Zein M, Kumbhari V, Besharati S, Ngamruengphong S, Messallam A, Abdelgalil A, Saxena P, Tieu AH, Raja S, Stein E, Dhalla S, Garcia P, Singh VK, Pasricha PJ, Kalloo AN, Clarke JO (2016) Comprehensive analysis of efficacy and safety of peroral endoscopic myotomy performed by a gastroenterologist in the endoscopy unit: a single-center experience. Gastrointest Endosc 83(1):117–125 Khashab MA, El Zein M, Kumbhari V, Besharati S, Ngamruengphong S, Messallam A, Abdelgalil A, Saxena P, Tieu AH, Raja S, Stein E, Dhalla S, Garcia P, Singh VK, Pasricha PJ, Kalloo AN, Clarke JO (2016) Comprehensive analysis of efficacy and safety of peroral endoscopic myotomy performed by a gastroenterologist in the endoscopy unit: a single-center experience. Gastrointest Endosc 83(1):117–125
go back to reference Kiesslich R, Neurath MF (2007) Endomicroscopy is born-do we still need the pathologist? Gastrointest Endosc 66(1):150–153 Kiesslich R, Neurath MF (2007) Endomicroscopy is born-do we still need the pathologist? Gastrointest Endosc 66(1):150–153
go back to reference Kim B, Lee S, Park JH, Park J-O (2005) Design and fabrication of a locomotive mechanism for capsule-type endoscopes using shape memory alloys (SMAs). IEEE/ASME Trans Mechatron 10(1):77–86 Kim B, Lee S, Park JH, Park J-O (2005) Design and fabrication of a locomotive mechanism for capsule-type endoscopes using shape memory alloys (SMAs). IEEE/ASME Trans Mechatron 10(1):77–86
go back to reference Kodashima S, Fujishiro M, Ono S, Niimi K, Mochizuki S, Asada-Hirayama I, Konno-Shimizu M, Matsuda R, Minatsuki C, Nakayama C, Takahashi Y, Sakaguchi Y, Yamamichi N, Tanaka C, Koike K (2014) Evaluation of a new image-enhanced endoscopic technology using band-limited light for detection of esophageal squamous cell carcinoma. Dig Endosc 26(2):164–171 Kodashima S, Fujishiro M, Ono S, Niimi K, Mochizuki S, Asada-Hirayama I, Konno-Shimizu M, Matsuda R, Minatsuki C, Nakayama C, Takahashi Y, Sakaguchi Y, Yamamichi N, Tanaka C, Koike K (2014) Evaluation of a new image-enhanced endoscopic technology using band-limited light for detection of esophageal squamous cell carcinoma. Dig Endosc 26(2):164–171
go back to reference Kodogiannis VS, Lygouras JN (2008) Neuro-fuzzy classification system for wireless-capsule endoscopic images. Eng Technol pp 620–628 Kodogiannis VS, Lygouras JN (2008) Neuro-fuzzy classification system for wireless-capsule endoscopic images. Eng Technol pp 620–628
go back to reference Kodogiannis VS, Boulougoura M, Lygouras JN, Petrounias I (2007) A neuro-fuzzy-based system for detecting abnormal patterns in wireless-capsule endoscopic images. Neurocomputing 70(4–6):704–717 Kodogiannis VS, Boulougoura M, Lygouras JN, Petrounias I (2007) A neuro-fuzzy-based system for detecting abnormal patterns in wireless-capsule endoscopic images. Neurocomputing 70(4–6):704–717
go back to reference Kondor IR (2008) Group theoretical methods in machine learning. Columbia University, New York Kondor IR (2008) Group theoretical methods in machine learning. Columbia University, New York
go back to reference Korngold E (2011) GISTs—gastrointestinal stromal tumors, Elisabetta AM de Lutio di Castelguidone, Ed. Springer, vol. 42, no. 3 Korngold E (2011) GISTs—gastrointestinal stromal tumors, Elisabetta AM de Lutio di Castelguidone, Ed. Springer, vol. 42, no. 3
go back to reference Koshy NE, Gopi VP (2015) A new method for ulcer detection in endoscopic images. In: 2nd international conference on electronics and communication systems (ICECS). IEEE, pp 1725–1729 Koshy NE, Gopi VP (2015) A new method for ulcer detection in endoscopic images. In: 2nd international conference on electronics and communication systems (ICECS). IEEE, pp 1725–1729
go back to reference Krishnan S, Goh P (1997) Quantitative parametrization of colonoscopic images by applying fuzzy technique. In: 19th Annual international conference of the IEEE on engineering in medicine and biology society, vol 3, pp 1121–1123 Krishnan S, Goh P (1997) Quantitative parametrization of colonoscopic images by applying fuzzy technique. In: 19th Annual international conference of the IEEE on engineering in medicine and biology society, vol 3, pp 1121–1123
go back to reference Krishnan S, Goh P (1999) Region labeling of colonoscopic images using fuzzy logic. In: Proceedings of the first joint BMES/EMBS conference, vol 2, p 1149 Krishnan S, Goh P (1999) Region labeling of colonoscopic images using fuzzy logic. In: Proceedings of the first joint BMES/EMBS conference, vol 2, p 1149
go back to reference Krishnan S, Yang X, Chan K, Kumar S, Goh P (1998a) Intestinal abnormality detection from endoscopic images. In: 20th Annual international conference of the IEEE engineering in medicine and biology society biomedical engineering towards the year 2000 and beyond vol 2, no. 2, pp 895–898 Krishnan S, Yang X, Chan K, Kumar S, Goh P (1998a) Intestinal abnormality detection from endoscopic images. In: 20th Annual international conference of the IEEE engineering in medicine and biology society biomedical engineering towards the year 2000 and beyond vol 2, no. 2, pp 895–898
go back to reference Krishnan S, Yap C, Asari K, Goh P (1998b) Neural network based approaches for the classification of colonoscopic images. In: 20th annual international conference of the IEEE on engineering in medicine and biology society, vol 3, pp 1678–1680 Krishnan S, Yap C, Asari K, Goh P (1998b) Neural network based approaches for the classification of colonoscopic images. In: 20th annual international conference of the IEEE on engineering in medicine and biology society, vol 3, pp 1678–1680
go back to reference Krizhevsky A, Sutskever I, Hinton GE (2012) Imagenet classification with deep convolutional neural networks. In Advances in neural information processing systems, pp 1097–1105 Krizhevsky A, Sutskever I, Hinton GE (2012) Imagenet classification with deep convolutional neural networks. In Advances in neural information processing systems, pp 1097–1105
go back to reference Kwitt R, Uhl A (2008) Color eigen-subband features for endoscopy image classification. In: IEEE international conference on acoustics, speech and signal processing, pp 589–592 Kwitt R, Uhl A (2008) Color eigen-subband features for endoscopy image classification. In: IEEE international conference on acoustics, speech and signal processing, pp 589–592
go back to reference Kwitt R, Uhl A, Häfner M, Gangl A, Wrba F, Vécsei A (2010) Predicting the histology of colorectal lesions in a probabilistic framework. In: IEEE computer society conference on computer vision and pattern recognition workshops (CVPRW), pp 103–110 Kwitt R, Uhl A, Häfner M, Gangl A, Wrba F, Vécsei A (2010) Predicting the histology of colorectal lesions in a probabilistic framework. In: IEEE computer society conference on computer vision and pattern recognition workshops (CVPRW), pp 103–110
go back to reference Lau PY, Correia PL (2007) Detection of bleeding patterns in WCE video using multiple features. In: Annual international conference of the IEEE engineering in medicine and biology, pp 5601–5604 Lau PY, Correia PL (2007) Detection of bleeding patterns in WCE video using multiple features. In: Annual international conference of the IEEE engineering in medicine and biology, pp 5601–5604
go back to reference LeCun Y, Bengio Y, Hinton G (2015) Deep learning. Nature 521(7553):436 LeCun Y, Bengio Y, Hinton G (2015) Deep learning. Nature 521(7553):436
go back to reference Lee J, Oh J, Shah SK, Yuan X, Tang SJ (2007) Automatic classification of digestive organs in wireless capsule endoscopy videos. In: ACM symposium on applied computing, SAC, pp 1041–1045 Lee J, Oh J, Shah SK, Yuan X, Tang SJ (2007) Automatic classification of digestive organs in wireless capsule endoscopy videos. In: ACM symposium on applied computing, SAC, pp 1041–1045
go back to reference Lee T-C, Lin Y-H, Uedo N, Wang H-P, Chang H-T, Hung C-W (2013) Computer-aided diagnosis in endoscopy: a novel application toward automatic detection of abnormal lesions on magnifying narrow-band imaging endoscopy in the stomach. In: 35th annual international conference of the IEEE in engineering in medicine and biology society, EMBC, pp 4430–4433 Lee T-C, Lin Y-H, Uedo N, Wang H-P, Chang H-T, Hung C-W (2013) Computer-aided diagnosis in endoscopy: a novel application toward automatic detection of abnormal lesions on magnifying narrow-band imaging endoscopy in the stomach. In: 35th annual international conference of the IEEE in engineering in medicine and biology society, EMBC, pp 4430–4433
go back to reference Leggett CL, Iyer PG (2015) Mucosal imaging advanced technologies in the gastrointestinal tract. Tech Gastrointest Endosc 17(4):161–170 Leggett CL, Iyer PG (2015) Mucosal imaging advanced technologies in the gastrointestinal tract. Tech Gastrointest Endosc 17(4):161–170
go back to reference Lehmann TM, Gönner C, Spitzer K (1999) Survey: interpolation methods in medical image processing. IEEE Trans Biomed Eng 18(11):1049–1075 Lehmann TM, Gönner C, Spitzer K (1999) Survey: interpolation methods in medical image processing. IEEE Trans Biomed Eng 18(11):1049–1075
go back to reference Leodolter A, Alonso S, González B, Ebert MP, Vieth M, Röcken C, Wex T, Peitz U, Malfertheiner P, Perucho M (2015) Somatic DNA hypomethylation in H. pylori-associated high-risk gastritis and gastric cancer: enhanced somatic hypomethylation associates with advanced stage cancer. Clin Transl Gastroenterol 6(4):e85 Leodolter A, Alonso S, González B, Ebert MP, Vieth M, Röcken C, Wex T, Peitz U, Malfertheiner P, Perucho M (2015) Somatic DNA hypomethylation in H. pylori-associated high-risk gastritis and gastric cancer: enhanced somatic hypomethylation associates with advanced stage cancer. Clin Transl Gastroenterol 6(4):e85
go back to reference Letter N (2007) News Letter. Am J Physiol 18(24):3–4 Letter N (2007) News Letter. Am J Physiol 18(24):3–4
go back to reference Lewis BS (2003) The utility of capsule endoscopy in obscure gastrointestinal bleeding. Tech Gastrointest Endosc 5(3):115–120 Lewis BS (2003) The utility of capsule endoscopy in obscure gastrointestinal bleeding. Tech Gastrointest Endosc 5(3):115–120
go back to reference Li B, Meng MQH (2007) Analysis of the gastrointestinal status from wireless capsule endoscopy images using local color feature. In: Proceedings of the international conference on information acquisition, ICIA, pp 553–557 Li B, Meng MQH (2007) Analysis of the gastrointestinal status from wireless capsule endoscopy images using local color feature. In: Proceedings of the international conference on information acquisition, ICIA, pp 553–557
go back to reference Li B, Meng MQH (2009a) Computer-based detection of bleeding and ulcer in wireless capsule endoscopy images by chromaticity moments. Comput Biol Med 39(2):141–147 Li B, Meng MQH (2009a) Computer-based detection of bleeding and ulcer in wireless capsule endoscopy images by chromaticity moments. Comput Biol Med 39(2):141–147
go back to reference Li B, Meng MQH (2009b) Computer-aided detection of bleeding regions for capsule endoscopy images. IEEE Trans Biomed Eng 56(4):1032–1039MathSciNet Li B, Meng MQH (2009b) Computer-aided detection of bleeding regions for capsule endoscopy images. IEEE Trans Biomed Eng 56(4):1032–1039MathSciNet
go back to reference Li B, Meng MQH (2009c) Texture analysis for ulcer detection in capsule endoscopy images. Image Vis Comput 27(9):1336–1342 Li B, Meng MQH (2009c) Texture analysis for ulcer detection in capsule endoscopy images. Image Vis Comput 27(9):1336–1342
go back to reference Li B, Meng MQ (2009d) Small bowel tumor detection for wireless capsule endoscopy images using textural features and support vector machine. In: IEEE/RSJ international conference on intelligent robots and systems, IROS, pp 498–503 Li B, Meng MQ (2009d) Small bowel tumor detection for wireless capsule endoscopy images using textural features and support vector machine. In: IEEE/RSJ international conference on intelligent robots and systems, IROS, pp 498–503
go back to reference Li B, Meng MQH (2010a) Tumor CE image classification using SVM-based feature selection. In: IEEE/RSJ international conference on intelligent robots and systems, IROS, pp 1322–1327 Li B, Meng MQH (2010a) Tumor CE image classification using SVM-based feature selection. In: IEEE/RSJ international conference on intelligent robots and systems, IROS, pp 1322–1327
go back to reference Li B, Meng MQH (2010b) Capsule endoscopy images classification by color texture and support vector machine. In: IEEE international conference on automation and logistics, ICAL, pp 126–131 Li B, Meng MQH (2010b) Capsule endoscopy images classification by color texture and support vector machine. In: IEEE international conference on automation and logistics, ICAL, pp 126–131
go back to reference Li B, Meng MQH (2012) Tumor recognition in wireless capsule endoscopy images using textural features and SVM-based feature selection. IEEE Trans Inf Technol Biomed 16(3):323–329 Li B, Meng MQH (2012) Tumor recognition in wireless capsule endoscopy images using textural features and SVM-based feature selection. IEEE Trans Inf Technol Biomed 16(3):323–329
go back to reference Li P, Chan KL, Krishnan SM, Gao Y (2004) Detecting abnormal regions in colonoscopic images by patch-based classifier ensemble. Int Conf Pattern Recognit 3:774–777 Li P, Chan KL, Krishnan SM, Gao Y (2004) Detecting abnormal regions in colonoscopic images by patch-based classifier ensemble. Int Conf Pattern Recognit 3:774–777
go back to reference Li B, Meng MQ-H, Lau JY (2011) Computer-aided small bowel tumor detection for capsule endoscopy. Artif Intell Med 52(1):11–16 Li B, Meng MQ-H, Lau JY (2011) Computer-aided small bowel tumor detection for capsule endoscopy. Artif Intell Med 52(1):11–16
go back to reference Li B, Jin H, Yang C, Xu G (2015) A novel color textural feature towards capsule endoscopy video summary. In: IEEE international conference on information and automation, ICIA, pp 766–769 Li B, Jin H, Yang C, Xu G (2015) A novel color textural feature towards capsule endoscopy video summary. In: IEEE international conference on information and automation, ICIA, pp 766–769
go back to reference Liedlgruber M, Uhl A (2011) Computer-aided decision support systems for endoscopy in the gastrointestinal tract: a review. IEEE Rev Biomed Eng 4:73–88 Liedlgruber M, Uhl A (2011) Computer-aided decision support systems for endoscopy in the gastrointestinal tract: a review. IEEE Rev Biomed Eng 4:73–88
go back to reference Liedlgruber M, Supervisor T (2011) Computer-aided classification of endoscopic images from the gastrointestinal tract. Ph.D. Dissertation, Faculty of Natural Sciences, University of Salzburg Liedlgruber M, Supervisor T (2011) Computer-aided classification of endoscopic images from the gastrointestinal tract. Ph.D. Dissertation, Faculty of Natural Sciences, University of Salzburg
go back to reference Lima C, Barbosa D, Ramos J, Tavares A, Monteiro L, Carvalho L (2008) Classification of endoscopic capsule images by using color wavelet features, higher order statistics and radial basis functions. In: 30th Annual international conference of the IEEE on engineering in medicine and biology society, EMBS, pp 1242–1245 Lima C, Barbosa D, Ramos J, Tavares A, Monteiro L, Carvalho L (2008) Classification of endoscopic capsule images by using color wavelet features, higher order statistics and radial basis functions. In: 30th Annual international conference of the IEEE on engineering in medicine and biology society, EMBS, pp 1242–1245
go back to reference Liu DY, Gan T, Rao NN, Xu GG, Zeng B, Li HL (2015) Automatic detection of early gastrointestinal cancer lesions based on optimal feature extraction from gastroscopic images. J Med Imaging Health Inf 5:296–302 Liu DY, Gan T, Rao NN, Xu GG, Zeng B, Li HL (2015) Automatic detection of early gastrointestinal cancer lesions based on optimal feature extraction from gastroscopic images. J Med Imaging Health Inf 5:296–302
go back to reference Lopez-Ceron M, Van Den Broek FJC, Mathus-Vliegen EM, Boparai KS, Van Eeden S, Fockens P, Dekker E (2013) The role of high-resolution endoscopy and narrow-band imaging in the evaluation of upper GI neoplasia in familial adenomatous polyposis. Gastrointest Endosc 77(4):542–550 Lopez-Ceron M, Van Den Broek FJC, Mathus-Vliegen EM, Boparai KS, Van Eeden S, Fockens P, Dekker E (2013) The role of high-resolution endoscopy and narrow-band imaging in the evaluation of upper GI neoplasia in familial adenomatous polyposis. Gastrointest Endosc 77(4):542–550
go back to reference Lucas A, Iliadis M, Molina R, Katsaggelos AK (2018) Using deep neural networks for inverse problems in imaging. IEEE Signal Process Mag 35(1):20–36 Lucas A, Iliadis M, Molina R, Katsaggelos AK (2018) Using deep neural networks for inverse problems in imaging. IEEE Signal Process Mag 35(1):20–36
go back to reference Maghsoudi OH (2017) Superpixels based segmentation and SVM based classification method to distinguish five diseases from normal regions in wireless capsule endoscopy. arXiv preprint arXiv:1711.06616 Maghsoudi OH (2017) Superpixels based segmentation and SVM based classification method to distinguish five diseases from normal regions in wireless capsule endoscopy. arXiv preprint arXiv:​1711.​06616
go back to reference Magoulas GD, Plagianakos VP, Vrahatis MN (2004) Neural network-based colonoscopic diagnosis using on-line learning and differential evolution. Appl Soft Comput 4(4):369–379 Magoulas GD, Plagianakos VP, Vrahatis MN (2004) Neural network-based colonoscopic diagnosis using on-line learning and differential evolution. Appl Soft Comput 4(4):369–379
go back to reference Mahmood F, Chen R, Durr NJ (2018) Unsupervised reverse domain adaptation for synthetic medical images via adversarial training. IEEE Trans Med Imaging 37(12):2572–2581 Mahmood F, Chen R, Durr NJ (2018) Unsupervised reverse domain adaptation for synthetic medical images via adversarial training. IEEE Trans Med Imaging 37(12):2572–2581
go back to reference Mallat S (2016) Understanding deep convolutional networks. Philos Trans R Soc A Math Phys Eng Sci 374(2065):20150203 Mallat S (2016) Understanding deep convolutional networks. Philos Trans R Soc A Math Phys Eng Sci 374(2065):20150203
go back to reference Maroulis DE, Iakovidis DK, Karkanis SA, Karras DA, Maroulis DE, Iakovidis DK, Karkanis SA, Karras DA (2003) Cold: a versatile detection system for colorectal lesions in endoscopy video-frames. Comput Methods Programs Biomed 70(2):151–166 Maroulis DE, Iakovidis DK, Karkanis SA, Karras DA, Maroulis DE, Iakovidis DK, Karkanis SA, Karras DA (2003) Cold: a versatile detection system for colorectal lesions in endoscopy video-frames. Comput Methods Programs Biomed 70(2):151–166
go back to reference Martinez-Herrera SE, Benezeth Y, Boffety M, Emile JF, Marzani F, Lamarque D, Goudail F (2016) Identification of precancerous lesions by multispectral gastroendoscopy. Signal Image Video Process 10(3):455–462 Martinez-Herrera SE, Benezeth Y, Boffety M, Emile JF, Marzani F, Lamarque D, Goudail F (2016) Identification of precancerous lesions by multispectral gastroendoscopy. Signal Image Video Process 10(3):455–462
go back to reference Martins MM, Barbosa DJ, Ramos J, Lima CS (2010) Small bowel tumors detection in capsule endoscopy by Gaussian modeling of color curvelet covariance coefficients. In: Annual international conference of the IEEE engineering in medicine and biology society, EMBC, pp 5557–5560 Martins MM, Barbosa DJ, Ramos J, Lima CS (2010) Small bowel tumors detection in capsule endoscopy by Gaussian modeling of color curvelet covariance coefficients. In: Annual international conference of the IEEE engineering in medicine and biology society, EMBC, pp 5557–5560
go back to reference Mathew M, Gopi VP (2015) Transform based bleeding detection technique for endoscopic images. In: 2nd international conference on electronics and communication systems, ICECS, pp 1730–1734 Mathew M, Gopi VP (2015) Transform based bleeding detection technique for endoscopic images. In: 2nd international conference on electronics and communication systems, ICECS, pp 1730–1734
go back to reference Miyahara R, Niwa Y, Matsuura T, Maeda O, Ando T, Ohmiya N, Itoh A, Hirooka Y, Goto H (2007) Prevalence and prognosis of gastric cancer detected by screening in a large Japanese population: data from a single institute over 30 years. J Gastroenterol Hepatol (Aust) 22(9):1435–1442 Miyahara R, Niwa Y, Matsuura T, Maeda O, Ando T, Ohmiya N, Itoh A, Hirooka Y, Goto H (2007) Prevalence and prognosis of gastric cancer detected by screening in a large Japanese population: data from a single institute over 30 years. J Gastroenterol Hepatol (Aust) 22(9):1435–1442
go back to reference Miyaki R, Yoshida S, Tanaka S, Kominami Y, Sanomura Y, Matsuo T, Oka S, Raytchev B, Tamaki T, Koide T, Kaneda K, Yoshihara M, Chayama K (2015) A computer system to be used with laser-based endoscopy for quantitative diagnosis of early gastric cancer. J Clin Gastroenterol 49(2):108–115 Miyaki R, Yoshida S, Tanaka S, Kominami Y, Sanomura Y, Matsuo T, Oka S, Raytchev B, Tamaki T, Koide T, Kaneda K, Yoshihara M, Chayama K (2015) A computer system to be used with laser-based endoscopy for quantitative diagnosis of early gastric cancer. J Clin Gastroenterol 49(2):108–115
go back to reference Mountford RA, Brown P, Salmon PR, Alvarenga C, Neumann CS, Read AE (1980) Gastric cancer detection in gastric ulcer disease. Gut 21(1):9–17 Mountford RA, Brown P, Salmon PR, Alvarenga C, Neumann CS, Read AE (1980) Gastric cancer detection in gastric ulcer disease. Gut 21(1):9–17
go back to reference Muto M, Yao K, Kaise M, Kato M, Uedo N, Yagi K, Tajiri H (2016) Magnifying endoscopy simple diagnostic algorithm for early gastric cancer (MESDA-G). Dig Endosc 28(4):379–393 Muto M, Yao K, Kaise M, Kato M, Uedo N, Yagi K, Tajiri H (2016) Magnifying endoscopy simple diagnostic algorithm for early gastric cancer (MESDA-G). Dig Endosc 28(4):379–393
go back to reference Namikawa T, Kobayashi M, Okabayashi T, Ozaki S, Nakamura S, Yamashita K, Ueta H, Miyazaki J, Tamura S, Ohtsuki Y (2005) Primary gastric small cell carcinoma: report of a case and review of the literature. Med Mol Morphol 38(4):256–261 Namikawa T, Kobayashi M, Okabayashi T, Ozaki S, Nakamura S, Yamashita K, Ueta H, Miyazaki J, Tamura S, Ohtsuki Y (2005) Primary gastric small cell carcinoma: report of a case and review of the literature. Med Mol Morphol 38(4):256–261
go back to reference Nawarathna R, Oh J, Muthukudage J, Tavanapong W, Wong J, de Groen PC, Tang SJ (2014) Abnormal image detection in endoscopy videos using a filter bank and local binary patterns. Neurocomputing 144:70–91 Nawarathna R, Oh J, Muthukudage J, Tavanapong W, Wong J, de Groen PC, Tang SJ (2014) Abnormal image detection in endoscopy videos using a filter bank and local binary patterns. Neurocomputing 144:70–91
go back to reference Nishimura J, Nishikawa J, Nakamura M, Goto A, Hamabe K, Hashimoto S, Okamoto T, Suenaga M, Fujita Y, Hamamoto Y, Sakaida I (2014) Efficacy of i-scan imaging for the detection and diagnosis of early gastric carcinomas. Gastroenterol Res Pract Nishimura J, Nishikawa J, Nakamura M, Goto A, Hamabe K, Hashimoto S, Okamoto T, Suenaga M, Fujita Y, Hamamoto Y, Sakaida I (2014) Efficacy of i-scan imaging for the detection and diagnosis of early gastric carcinomas. Gastroenterol Res Pract
go back to reference Nosato H, Sakanashi H, Takahashi E, Murakawa M (2015) Method of retrieving multi-scale objects from optical colonoscopy images based on image-recognition techniques. In: IEEE biomedical circuits and systems conference: engineering for healthy minds and able bodies, (BioCAS), pp 1–4 Nosato H, Sakanashi H, Takahashi E, Murakawa M (2015) Method of retrieving multi-scale objects from optical colonoscopy images based on image-recognition techniques. In: IEEE biomedical circuits and systems conference: engineering for healthy minds and able bodies, (BioCAS), pp 1–4
go back to reference Ogoveanu IR, Iurea MEC, Treba CTS, Ovanescu VFI, Ere CCV, Constantinescu AF, Ionescu M, Rogoveanu I, Ciurea ME, Streba CT, Iovanescu VF, Vere CC (2015) Wireless capsule endoscopy in correlation with software application in gastrointestinal diseases. Current Health Sci J 41(2):89–94 Ogoveanu IR, Iurea MEC, Treba CTS, Ovanescu VFI, Ere CCV, Constantinescu AF, Ionescu M, Rogoveanu I, Ciurea ME, Streba CT, Iovanescu VF, Vere CC (2015) Wireless capsule endoscopy in correlation with software application in gastrointestinal diseases. Current Health Sci J 41(2):89–94
go back to reference Owens SR, Appelman HD (2014a) Atlas of Esophagus and stomach pathology. Springer, Berlin Owens SR, Appelman HD (2014a) Atlas of Esophagus and stomach pathology. Springer, Berlin
go back to reference Owens SR, Appelman HD (2014b) Carcinoid tumor of the stomach. Springer, Berlin Owens SR, Appelman HD (2014b) Carcinoid tumor of the stomach. Springer, Berlin
go back to reference Pan G, Yan G, Qiu X, Cui J (2011) Bleeding detection in wireless capsule endoscopy based on probabilistic neural network. J Med Syst 35:1477–1484 Pan G, Yan G, Qiu X, Cui J (2011) Bleeding detection in wireless capsule endoscopy based on probabilistic neural network. J Med Syst 35:1477–1484
go back to reference Peljto M, Milici AJ, Lange H, Krueger J, Aeffner F, Young GD, Martin NT (2016) Digital image analysis of inflammatory cells and mediators of inflammation. U.S. Patent 9,298,968 Peljto M, Milici AJ, Lange H, Krueger J, Aeffner F, Young GD, Martin NT (2016) Digital image analysis of inflammatory cells and mediators of inflammation. U.S. Patent 9,298,968
go back to reference Pennazio M (2006) Capsule endoscopy: Where are we after 6 years of clinical use? Dig Liver Dis 38(12):867–878 Pennazio M (2006) Capsule endoscopy: Where are we after 6 years of clinical use? Dig Liver Dis 38(12):867–878
go back to reference Penny HA, Mooney PD, Burden M, Patel N, Johnston AJ, Wong SH, Teare J, Sanders DS (2016) High definition endoscopy with or without I-scan increases the detection of celiac disease during routine endoscopy. Dig Liver Dis 48(6):644–649 Penny HA, Mooney PD, Burden M, Patel N, Johnston AJ, Wong SH, Teare J, Sanders DS (2016) High definition endoscopy with or without I-scan increases the detection of celiac disease during routine endoscopy. Dig Liver Dis 48(6):644–649
go back to reference Pogorelov K, Riegler M, Halvorsen P, Griwodz C, Lange T, Randel K, Eskeland S, Dang-Nguyen D-T, Ostroukhova O, Lux M, Spampinato C (2017) A comparison of deep learning with global features for gastrointestinal disease detection. In: CEUR workshop proceedings, vol 1984, pp 8–10 Pogorelov K, Riegler M, Halvorsen P, Griwodz C, Lange T, Randel K, Eskeland S, Dang-Nguyen D-T, Ostroukhova O, Lux M, Spampinato C (2017) A comparison of deep learning with global features for gastrointestinal disease detection. In: CEUR workshop proceedings, vol 1984, pp 8–10
go back to reference Poh CK, Htwe TM, Li L, Shen W, Liu J, Lim JH, Chan KL, Tan PC (2010) Multi-level local feature classification for bleeding detection in wireless capsule endoscopy images. In: IEEE conference on cybernetics and intelligent systems, CIS, pp 76–81 Poh CK, Htwe TM, Li L, Shen W, Liu J, Lim JH, Chan KL, Tan PC (2010) Multi-level local feature classification for bleeding detection in wireless capsule endoscopy images. In: IEEE conference on cybernetics and intelligent systems, CIS, pp 76–81
go back to reference Qi X (2008) Computer-aided diagnosis of early cancers in the gastrointestinal tract using optical coherence tomography. Ph.D. Dissertation, Case Western Reserve University Qi X (2008) Computer-aided diagnosis of early cancers in the gastrointestinal tract using optical coherence tomography. Ph.D. Dissertation, Case Western Reserve University
go back to reference Rajivegandhi C, Shree ND, Khan S, Abinaya B (2015) Detection Of peptic ulcers based on thresholding and watershed segmentation. In: 3rd international conference on signal processing, communication and networking (ICSCN). IEEE, pp 1–5 Rajivegandhi C, Shree ND, Khan S, Abinaya B (2015) Detection Of peptic ulcers based on thresholding and watershed segmentation. In: 3rd international conference on signal processing, communication and networking (ICSCN). IEEE, pp 1–5
go back to reference Razzak MI, Naz S, Zaib A (2018) Deep learning for medical image processing: overview, challenges and the future. In: Classification in bioapps. Springer, Cham, pp. 323–350 Razzak MI, Naz S, Zaib A (2018) Deep learning for medical image processing: overview, challenges and the future. In: Classification in bioapps. Springer, Cham, pp. 323–350
go back to reference Report C (1990) Small cell carcinoma of the stomach case report and review of the literature. Dig Dis Sci 35(4):513–518 Report C (1990) Small cell carcinoma of the stomach case report and review of the literature. Dig Dis Sci 35(4):513–518
go back to reference Riaz F, Ribeiro MD, Coimbra MT (2009) Quantitative comparison of segmentation methods for in-body images. In: 31st Annual international conference of the IEEE engineering in medicine and biology society: engineering the future of biomedicine, EMBC, pp 5785–5788 Riaz F, Ribeiro MD, Coimbra MT (2009) Quantitative comparison of segmentation methods for in-body images. In: 31st Annual international conference of the IEEE engineering in medicine and biology society: engineering the future of biomedicine, EMBC, pp 5785–5788
go back to reference Riaz F, Areia M, Silva FB, Dinis-Ribeiro M, Nunes PP, Coimbra M (2011) Gabor textons for classification of gastroenterology images. In: ieee international symposium on biomedical imaging: from nano to macro. IEEE, pp 117–120 Riaz F, Areia M, Silva FB, Dinis-Ribeiro M, Nunes PP, Coimbra M (2011) Gabor textons for classification of gastroenterology images. In: ieee international symposium on biomedical imaging: from nano to macro. IEEE, pp 117–120
go back to reference Riaz F, Silva FB, Ribeiro MD, Coimbra MT (2012) Invariant gabor texture descriptors for classification of gastroenterology images. IEEE Trans Biomed Eng 59(10):2893–2904 Riaz F, Silva FB, Ribeiro MD, Coimbra MT (2012) Invariant gabor texture descriptors for classification of gastroenterology images. IEEE Trans Biomed Eng 59(10):2893–2904
go back to reference Riaz F, Silva FB, Ribeiro MD, Coimbra MT (2013) Impact of visual features on the segmentation of gastroenterology images using normalized cuts. IEEE Trans Biomed Eng 60(5):1191–1201 Riaz F, Silva FB, Ribeiro MD, Coimbra MT (2013) Impact of visual features on the segmentation of gastroenterology images using normalized cuts. IEEE Trans Biomed Eng 60(5):1191–1201
go back to reference Riaz F, Hassan A, Nisar R, Dinis-Ribeiro M, Coimbra MT (2017) Content-adaptive region-based color texture descriptors for medical images. IEEE J Biomed Health Inf 21(1):162–171 Riaz F, Hassan A, Nisar R, Dinis-Ribeiro M, Coimbra MT (2017) Content-adaptive region-based color texture descriptors for medical images. IEEE J Biomed Health Inf 21(1):162–171
go back to reference Ribeiro M (2005) Clinical endoscopic and laboratorial assessment of patients with associated lesions to gastric adenocarcinoma,. Ph.D. Dissertation, Faculdade de Medicina da Universidade do Porto, Ph.D. thesis Ribeiro M (2005) Clinical endoscopic and laboratorial assessment of patients with associated lesions to gastric adenocarcinoma,. Ph.D. Dissertation, Faculdade de Medicina da Universidade do Porto, Ph.D. thesis
go back to reference Rogy MA, Bünger MA (2015) The historical perspective of gastric cancer. In: Gastric cancer. Springer, pp 3–21 Rogy MA, Bünger MA (2015) The historical perspective of gastric cancer. In: Gastric cancer. Springer, pp 3–21
go back to reference Roukos DH, Agnantis NJ, Fatouros M, Kappas AM (2002) Gastric cancer: introduction, pathology, epidemiology. Gastric Breast Cancer 1(1):1–3 Roukos DH, Agnantis NJ, Fatouros M, Kappas AM (2002) Gastric cancer: introduction, pathology, epidemiology. Gastric Breast Cancer 1(1):1–3
go back to reference Sainju S, Bui FM, Wahid KA (2014) Automated bleeding detection in capsule endoscopy videos using statistical features and region growing. J Med Syst 38(4):25 Sainju S, Bui FM, Wahid KA (2014) Automated bleeding detection in capsule endoscopy videos using statistical features and region growing. J Med Syst 38(4):25
go back to reference Sarwar SS, Panda P, Roy K (2017) Gabor filter assisted energy efficient fast learning convolutional neural networks. In: 2017 IEEE/ACM international symposium on low power electronics and design (ISLPED), IEEE, pp 1–6 Sarwar SS, Panda P, Roy K (2017) Gabor filter assisted energy efficient fast learning convolutional neural networks. In: 2017 IEEE/ACM international symposium on low power electronics and design (ISLPED), IEEE, pp 1–6
go back to reference Schlag C, Menzel C, Nennstiel S, Neu B, Phillip V, Schuster T, Schmid RM, Von Delius S (2015) Emergency video capsule endoscopy in patients with acute severe GI bleeding and negative upper endoscopy results. Gastrointest Endosc 81(4):889–895 Schlag C, Menzel C, Nennstiel S, Neu B, Phillip V, Schuster T, Schmid RM, Von Delius S (2015) Emergency video capsule endoscopy in patients with acute severe GI bleeding and negative upper endoscopy results. Gastrointest Endosc 81(4):889–895
go back to reference Schmidhuber J (2015) Deep learning in neural networks: an overview. Neural Netw 61:85–117 Schmidhuber J (2015) Deep learning in neural networks: an overview. Neural Netw 61:85–117
go back to reference Seidel R, Burdick JS (1998) Gastric leiomyosarcoma presenting as a gastric wall abscess. Am J Gastroenterol 93(11):2241–2244 Seidel R, Burdick JS (1998) Gastric leiomyosarcoma presenting as a gastric wall abscess. Am J Gastroenterol 93(11):2241–2244
go back to reference Serpa-Andrade L, Robles-Bykbaev V, Gonzalez-Delgado L, Moreno JL (2016) An approach based on Fourier descriptors and decision trees to perform presumptive diagnosis of esophagitis for educational purposes. In: 2015 IEEE International autumn meeting on power, electronics and computing (ROPEC). IEEE Serpa-Andrade L, Robles-Bykbaev V, Gonzalez-Delgado L, Moreno JL (2016) An approach based on Fourier descriptors and decision trees to perform presumptive diagnosis of esophagitis for educational purposes. In: 2015 IEEE International autumn meeting on power, electronics and computing (ROPEC). IEEE
go back to reference Ševo I, Avramović A, Balasingham I, Elle OJ, Bergsland J, Aabakken L (2016) Edge density based automatic detection of inflammation in colonoscopy videos. Comput Biol Med 72:138–150 Ševo I, Avramović A, Balasingham I, Elle OJ, Bergsland J, Aabakken L (2016) Edge density based automatic detection of inflammation in colonoscopy videos. Comput Biol Med 72:138–150
go back to reference Sharma H, Zerbe N, Klempert I, Hellwich O, Hufnagl P (2017) Deep convolutional neural networks for automatic classification of gastric carcinoma using whole slide images in digital histopathology. Comput Med Imaging Gr 61:2–13 Sharma H, Zerbe N, Klempert I, Hellwich O, Hufnagl P (2017) Deep convolutional neural networks for automatic classification of gastric carcinoma using whole slide images in digital histopathology. Comput Med Imaging Gr 61:2–13
go back to reference Shichijo S, Nomura S, Aoyama K, Nishikawa Y, Miura M, Shinagawa T, Takiyama H, Tanimoto T, Ishihara S, Matsuo K et al (2017) Application of convolutional neural networks in the diagnosis of helicobacter pylori infection based on endoscopic images. EBioMedicine 25:106–111 Shichijo S, Nomura S, Aoyama K, Nishikawa Y, Miura M, Shinagawa T, Takiyama H, Tanimoto T, Ishihara S, Matsuo K et al (2017) Application of convolutional neural networks in the diagnosis of helicobacter pylori infection based on endoscopic images. EBioMedicine 25:106–111
go back to reference Shin D, Lee MH, Polydorides AD, Pierce MC, Vila PM, Parikh ND, Rosen DG, Anandasabapathy S, Richards-Kortum RR (2016) Quantitative analysis of high-resolution microendoscopic images for diagnosis of neoplasia in patients with Barrett’s esophagus. Gastrointest Endosc 83(1):107–114 Shin D, Lee MH, Polydorides AD, Pierce MC, Vila PM, Parikh ND, Rosen DG, Anandasabapathy S, Richards-Kortum RR (2016) Quantitative analysis of high-resolution microendoscopic images for diagnosis of neoplasia in patients with Barrett’s esophagus. Gastrointest Endosc 83(1):107–114
go back to reference Siegel RL, Miller KD, Jemal A (2015) Cancer statistics, 2015. CA A Cancer J Clin 65(1):5–29 Siegel RL, Miller KD, Jemal A (2015) Cancer statistics, 2015. CA A Cancer J Clin 65(1):5–29
go back to reference Sobri Z, Amylia H, Sakim M (2012) Texture color fusion based features extraction for endoscopic gastritis images classification. Int J Comput Electr Eng 4(5):674–678 Sobri Z, Amylia H, Sakim M (2012) Texture color fusion based features extraction for endoscopic gastritis images classification. Int J Comput Electr Eng 4(5):674–678
go back to reference Song M, Ang TL (2014) Early detection of early gastric cancer using image-enhanced endoscopy: current trends. Gastrointest Interv 3(1):1–7 Song M, Ang TL (2014) Early detection of early gastric cancer using image-enhanced endoscopy: current trends. Gastrointest Interv 3(1):1–7
go back to reference Sousa D-RMAM, André, Coimbra M (2009) Identifying cancer regions in vital-stained magnification endoscopy images using adapted color histograms. In: 16th IEEE international conference on image processing (ICIP), pp 681–684 Sousa D-RMAM, André, Coimbra M (2009) Identifying cancer regions in vital-stained magnification endoscopy images using adapted color histograms. In: 16th IEEE international conference on image processing (ICIP), pp 681–684
go back to reference Spyridonos P, Vilariño F, Vitrià J, Azpiroz F, Radeva P (2006) Anisotropic feature extraction from endoluminal images for detection of intestinal contractions. In: International conference on medical image computing and computer-assisted intervention, MICCAI, vol 9, pp 161–168 Spyridonos P, Vilariño F, Vitrià J, Azpiroz F, Radeva P (2006) Anisotropic feature extraction from endoluminal images for detection of intestinal contractions. In: International conference on medical image computing and computer-assisted intervention, MICCAI, vol 9, pp 161–168
go back to reference Swannell R (2010) World Cancer Report 2014, The Globe, no. 1, pp 6–7 Swannell R (2010) World Cancer Report 2014, The Globe, no. 1, pp 6–7
go back to reference Szczypiński P, Klepaczko A (2009) Selecting texture discriminative descriptors of capsule endpscopy images. In: 6th international symposium on image and signal processing and analysis, ISPA, pp 701–706 Szczypiński P, Klepaczko A (2009) Selecting texture discriminative descriptors of capsule endpscopy images. In: 6th international symposium on image and signal processing and analysis, ISPA, pp 701–706
go back to reference Szczypiński P, Klepaczko A, Pazurek M, Daniel P (2014) Texture and color based image segmentation and pathology detection in capsule endoscopy videos. Comput Methods Programs Biomed 113(1):396–411 Szczypiński P, Klepaczko A, Pazurek M, Daniel P (2014) Texture and color based image segmentation and pathology detection in capsule endoscopy videos. Comput Methods Programs Biomed 113(1):396–411
go back to reference Takita J, Kato H, Miyazaki T, Nakajima M, Fukai Y, Masuda N, Manda R, Fukuchi M, Kuwano H (2005) Primary squamous cell carcinoma of the stomach: a case report with immunohistochemical and molecular biologic studies. Hepatogastroenterology 52(63):969–974 Takita J, Kato H, Miyazaki T, Nakajima M, Fukai Y, Masuda N, Manda R, Fukuchi M, Kuwano H (2005) Primary squamous cell carcinoma of the stomach: a case report with immunohistochemical and molecular biologic studies. Hepatogastroenterology 52(63):969–974
go back to reference Thekkek N, Lee MH, Polydorides AD, Rosen DG, Anandasabapathy S, Richards-Kortum R (2015) Quantitative evaluation of in vivo vital-dye fluorescence endoscopic imaging for the detection of Barrett’s-associated neoplasia. J Biomed Opt 20(5):056002 Thekkek N, Lee MH, Polydorides AD, Rosen DG, Anandasabapathy S, Richards-Kortum R (2015) Quantitative evaluation of in vivo vital-dye fluorescence endoscopic imaging for the detection of Barrett’s-associated neoplasia. J Biomed Opt 20(5):056002
go back to reference Tischendorf JJW, Gross S, Winograd R, Hecker H, Auer R, Behrens A, Trautwein C, Aach T, Stehle T (2010) Computer-aided classification of colorectal polyps based on vascular patterns: a pilot study. Endoscopy 42(3):203–207 Tischendorf JJW, Gross S, Winograd R, Hecker H, Auer R, Behrens A, Trautwein C, Aach T, Stehle T (2010) Computer-aided classification of colorectal polyps based on vascular patterns: a pilot study. Endoscopy 42(3):203–207
go back to reference Tjoa MP, Krishnan SM, Doraiswami R (2002) Automated diagnosis for segmentation of colonoscopic images using chromatic features. In: IEEE Canadian conference on electrical and computer engineering, CCECE, vol 2, pp 1177–1180 Tjoa MP, Krishnan SM, Doraiswami R (2002) Automated diagnosis for segmentation of colonoscopic images using chromatic features. In: IEEE Canadian conference on electrical and computer engineering, CCECE, vol 2, pp 1177–1180
go back to reference Turcza P, Duplaga M (2011) Low power FPGA-based image processing core for wireless capsule endoscopy. Sens Actuators A Phys 172(2):552–560 Turcza P, Duplaga M (2011) Low power FPGA-based image processing core for wireless capsule endoscopy. Sens Actuators A Phys 172(2):552–560
go back to reference Ueo T, Yonemasu H, Yada N, Yano S, Ishida T, Urabe M, Takahashi K, Nagamatsu H, Narita R, Yao K, Daa T, Yokoyama S (2013) White opaque substance represents an intracytoplasmic accumulation of lipid droplets: immunohistochemical and immunoelectron microscopic investigation of 26 cases. Dig Endosc 25(2):147–155 Ueo T, Yonemasu H, Yada N, Yano S, Ishida T, Urabe M, Takahashi K, Nagamatsu H, Narita R, Yao K, Daa T, Yokoyama S (2013) White opaque substance represents an intracytoplasmic accumulation of lipid droplets: immunohistochemical and immunoelectron microscopic investigation of 26 cases. Dig Endosc 25(2):147–155
go back to reference van der Sommen F, Zinger S, Schoon EJ, de With PHN (2014) Supportive automatic annotation of early esophageal cancer using local gabor and color features. Neurocomputing 144:92–106 van der Sommen F, Zinger S, Schoon EJ, de With PHN (2014) Supportive automatic annotation of early esophageal cancer using local gabor and color features. Neurocomputing 144:92–106
go back to reference Van Gossum A (2015) Image-enhanced capsule endoscopy for characterization of small bowel lesions. Best Pract Res Clin Gastroenterol 29(4):525–531 Van Gossum A (2015) Image-enhanced capsule endoscopy for characterization of small bowel lesions. Best Pract Res Clin Gastroenterol 29(4):525–531
go back to reference Vécsei A, Fuhrmann T, Uhl A (2008) Towards automated diagnosis of celiac disease by computer-assisted classification of duodenal imagery. In: 4th IET international conference on advances in medical, signal and information processing, MEDSIP. IET, pp 1–4 Vécsei A, Fuhrmann T, Uhl A (2008) Towards automated diagnosis of celiac disease by computer-assisted classification of duodenal imagery. In: 4th IET international conference on advances in medical, signal and information processing, MEDSIP. IET, pp 1–4
go back to reference Vécsei A, Fuhrmann T, Liedlgruber M, Brunauer L, Payer H, Uhl A (2009) Automated classification of duodenal imagery in celiac disease using evolved Fourier feature vectors. Comput Methods Programs Biomed 95(2):S68–S78 Vécsei A, Fuhrmann T, Liedlgruber M, Brunauer L, Payer H, Uhl A (2009) Automated classification of duodenal imagery in celiac disease using evolved Fourier feature vectors. Comput Methods Programs Biomed 95(2):S68–S78
go back to reference Vieira PM, Ramos J, Lima CS (2015) Automatic detection of small bowel tumors in endoscopic capsule images by ROI selection based on discarded lightness information. In: 37th Annual international conference of the IEEE on engineering in medicine and biology society (EMBC), pp 3025–3028 Vieira PM, Ramos J, Lima CS (2015) Automatic detection of small bowel tumors in endoscopic capsule images by ROI selection based on discarded lightness information. In: 37th Annual international conference of the IEEE on engineering in medicine and biology society (EMBC), pp 3025–3028
go back to reference Wallace MB, Keisslich R (2010) Advances in endoscopic imaging of colorectal neoplasia. Gastroenterology 138(6):2140–2150 Wallace MB, Keisslich R (2010) Advances in endoscopic imaging of colorectal neoplasia. Gastroenterology 138(6):2140–2150
go back to reference Wang S, Cong Y, Fan H, Liu L, Li X, Yang Y, Tang Y, Zhao H, Yu H (2016a) Computer-aided endoscopic diagnosis without human specific labeling. IEEE Trans Biomed Eng 9294:1 Wang S, Cong Y, Fan H, Liu L, Li X, Yang Y, Tang Y, Zhao H, Yu H (2016a) Computer-aided endoscopic diagnosis without human specific labeling. IEEE Trans Biomed Eng 9294:1
go back to reference Wang S, Cong Y, Cao J, Yang Y, Tang Y, Zhao H, Yu H (2016b) Scalable gastroscopic video summarization via similar-inhibition dictionary selection. Artif Intell Med 66:1–13 Wang S, Cong Y, Cao J, Yang Y, Tang Y, Zhao H, Yu H (2016b) Scalable gastroscopic video summarization via similar-inhibition dictionary selection. Artif Intell Med 66:1–13
go back to reference Wang G, Li W, Zuluaga MA, Pratt R, Patel PA, Aertsen M, Doel T, David AL, Deprest J, Ourselin S, Vercauteren T (2018a) Interactive medical image segmentation using deep learning with image-specific fine-tuning. IEEE Trans Med Imaging 37(7):1562–1573 Wang G, Li W, Zuluaga MA, Pratt R, Patel PA, Aertsen M, Doel T, David AL, Deprest J, Ourselin S, Vercauteren T (2018a) Interactive medical image segmentation using deep learning with image-specific fine-tuning. IEEE Trans Med Imaging 37(7):1562–1573
go back to reference Wang T, Dong Y, Yang C, Wang L, Liang L, Zheng L, Pu J (2018b) Jumping and refined local pattern for texture classification. IEEE Access 6:64416–64426 Wang T, Dong Y, Yang C, Wang L, Liang L, Zheng L, Pu J (2018b) Jumping and refined local pattern for texture classification. IEEE Access 6:64416–64426
go back to reference Wong Kee Song LM, Adler DG, Chand B, Conway JD, Croffie JMB, DiSario JA, Mishkin DS, Shah RJ, Somogyi L, Tierney WM, Petersen BT (2007) Chromoendoscopy. Gastrointest Endosc 66(4):639–649 Wong Kee Song LM, Adler DG, Chand B, Conway JD, Croffie JMB, DiSario JA, Mishkin DS, Shah RJ, Somogyi L, Tierney WM, Petersen BT (2007) Chromoendoscopy. Gastrointest Endosc 66(4):639–649
go back to reference Wu X, Chen H, Gan T, Chen J, Ngo C-W, Peng Q (2016) Automatic hookworm detection in wireless capsule endoscopy images. IEEE Trans Med Imaging 35(7):1741–1752 Wu X, Chen H, Gan T, Chen J, Ngo C-W, Peng Q (2016) Automatic hookworm detection in wireless capsule endoscopy images. IEEE Trans Med Imaging 35(7):1741–1752
go back to reference Yamaguchi J, Yoneyama A, Minamoto T (2015)Automatic detection of early esophageal cancer from endoscope image using fractal dimension and discrete wavelet transform. In: 12th International conference on information technology-new generations, (ITNG). IEEE, pp 317–322 Yamaguchi J, Yoneyama A, Minamoto T (2015)Automatic detection of early esophageal cancer from endoscope image using fractal dimension and discrete wavelet transform. In: 12th International conference on information technology-new generations, (ITNG). IEEE, pp 317–322
go back to reference Yan R, Park J-H, Choi Y, Heo C-J, Yang S-M, Lee LP, Yang P (2012) Nanowire-based single-cell endoscopy. Nat Nanotechnol 7(3):191–196 Yan R, Park J-H, Choi Y, Heo C-J, Yang S-M, Lee LP, Yang P (2012) Nanowire-based single-cell endoscopy. Nat Nanotechnol 7(3):191–196
go back to reference Yang X, Ye X, Slabaugh G (2015) Multilabel region classification and semantic linking for colon segmentation in CT colonography. IEEE Trans Biomed Eng 62(3):948–959 Yang X, Ye X, Slabaugh G (2015) Multilabel region classification and semantic linking for colon segmentation in CT colonography. IEEE Trans Biomed Eng 62(3):948–959
go back to reference Yao R, Zhang S, Yang W, Cheng S, Chen Y (2010) Abnormality detection on gastroscopic images using patches assembled by local weights. In: 2010 International conference on medical image analysis and clinical application, MIACA 2010, pp 38–41 Yao R, Zhang S, Yang W, Cheng S, Chen Y (2010) Abnormality detection on gastroscopic images using patches assembled by local weights. In: 2010 International conference on medical image analysis and clinical application, MIACA 2010, pp 38–41
go back to reference Yu J-S, Chen J, Xiang Z, Zou Y-X (2015) A hybrid convolutional neural networks with extreme learning machine for wce image classification. In: IEEE international conference on robotics and biomimetics (ROBIO), pp 1822–1827 Yu J-S, Chen J, Xiang Z, Zou Y-X (2015) A hybrid convolutional neural networks with extreme learning machine for wce image classification. In: IEEE international conference on robotics and biomimetics (ROBIO), pp 1822–1827
go back to reference Yuan Y, Meng M-H (2015) Automatic bleeding frame detection in the wireless capsule endoscopy images. In: IEEE international conference on robotics and automation, ICRA, pp 1310–1315 Yuan Y, Meng M-H (2015) Automatic bleeding frame detection in the wireless capsule endoscopy images. In: IEEE international conference on robotics and automation, ICRA, pp 1310–1315
go back to reference Yuan Y, Li B, Meng Q (2015a) Bleeding frame and region detection in the wireless capsule endoscopy video. IEEE J Biomed Health Inf 2194:1–1 Yuan Y, Li B, Meng Q (2015a) Bleeding frame and region detection in the wireless capsule endoscopy video. IEEE J Biomed Health Inf 2194:1–1
go back to reference Yuan Y, Wang J, Li B, Meng MQH (2015b) Saliency based ulcer detection for wireless capsule endoscopy diagnosis. IEEE Trans Med Imaging 34(10):2046–2057 Yuan Y, Wang J, Li B, Meng MQH (2015b) Saliency based ulcer detection for wireless capsule endoscopy diagnosis. IEEE Trans Med Imaging 34(10):2046–2057
go back to reference Yuan Z, IzadyYazdanabadi M, Mokkapati D, Panvalkar R, Shin JY, Tajbakhsh N, Gurudu S, Liang J (2017a) Automatic polyp detection in colonoscopy videos. In: Medical imaging 2017: image processing, vol. 10133. International Society for Optics and Photonics, p 101332K Yuan Z, IzadyYazdanabadi M, Mokkapati D, Panvalkar R, Shin JY, Tajbakhsh N, Gurudu S, Liang J (2017a) Automatic polyp detection in colonoscopy videos. In: Medical imaging 2017: image processing, vol. 10133. International Society for Optics and Photonics, p 101332K
go back to reference Yuan Y, Yao X, Han J, Guo L, Meng MQH (2017b) Discriminative joint-feature topic model with dual constraints for WCE classification. IEEE Trans Cybern 48(7):2074–2085 Yuan Y, Yao X, Han J, Guo L, Meng MQH (2017b) Discriminative joint-feature topic model with dual constraints for WCE classification. IEEE Trans Cybern 48(7):2074–2085
go back to reference Zhang S, Yang W, Wu YL, Yao R, Cheng SD (2009) Abnormal region detection in gastroscopic images by combining classifiers on neighboring patches. In: International conference on machine learning and cybernetics vol 4, pp 2374–2379 Zhang S, Yang W, Wu YL, Yao R, Cheng SD (2009) Abnormal region detection in gastroscopic images by combining classifiers on neighboring patches. In: International conference on machine learning and cybernetics vol 4, pp 2374–2379
go back to reference Zhang Z, Bai L, Ren P, Hancock ER (2016) High-order graph matching kernel for early carcinoma EUS image classification. Multimed Tools Appl 75(7):3993–4012 Zhang Z, Bai L, Ren P, Hancock ER (2016) High-order graph matching kernel for early carcinoma EUS image classification. Multimed Tools Appl 75(7):3993–4012
go back to reference Zhang R, Zheng Y, Mak TWC, Yu R, Wong SH, Lau JY, Poon CC (2017) Automatic detection and classification of colorectal polyps by transferring low-level CNN features from nonmedical domain. IEEE J Biomed Health Inf 21(1):41–47 Zhang R, Zheng Y, Mak TWC, Yu R, Wong SH, Lau JY, Poon CC (2017) Automatic detection and classification of colorectal polyps by transferring low-level CNN features from nonmedical domain. IEEE J Biomed Health Inf 21(1):41–47
go back to reference Zhao Q, Mullin GE, Meng MQ-H, Dassopoulos T, Kumar R (2015) A general framework for wireless capsule endoscopy study synopsis. Comput Med Imaging Gr 41:108–16 Zhao Q, Mullin GE, Meng MQ-H, Dassopoulos T, Kumar R (2015) A general framework for wireless capsule endoscopy study synopsis. Comput Med Imaging Gr 41:108–16
go back to reference Zou Y, Li L, Wang Y, Yu J, Li Y, Deng WJ (2015) Classifying digestive organs in wireless capsule endoscopy images based on deep convolutional neural network. In: IEEE international conference on digital signal processing (DSP), pp 1274–1278 Zou Y, Li L, Wang Y, Yu J, Li Y, Deng WJ (2015) Classifying digestive organs in wireless capsule endoscopy images based on deep convolutional neural network. In: IEEE international conference on digital signal processing (DSP), pp 1274–1278
Metadata
Title
A survey of feature extraction and fusion of deep learning for detection of abnormalities in video endoscopy of gastrointestinal-tract
Authors
Hussam Ali
Muhammad Sharif
Mussarat Yasmin
Mubashir Husain Rehmani
Farhan Riaz
Publication date
03-08-2019
Publisher
Springer Netherlands
Published in
Artificial Intelligence Review / Issue 4/2020
Print ISSN: 0269-2821
Electronic ISSN: 1573-7462
DOI
https://doi.org/10.1007/s10462-019-09743-2

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