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2014 | OriginalPaper | Chapter

8. Addressable Biological Functionalization of Inorganics: Materials-Selective Fusion Proteins in Bio-nanotechnology

Authors : Banu Taktak Karaca, Marketa Hnilova, Candan Tamerler

Published in: Bio-Inspired Nanotechnology

Publisher: Springer New York

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Abstract

Biological systems have developed a wide range of ingenious solutions, which serve as valuable sources for inspiration in designing new materials and systems. The evolutionary pathways through which biological systems have been formed build upon the biomolecular machinery bridging multiple length scales to exhibit a multitude of diverse outstanding properties. With a growing understanding of the molecular processes involved, biological principles are regularly revisited for developing new bio-enabled approaches to materials engineering. A number of biomolecules play important roles in biological systems by performing various tasks based on their functional specificity and their precise molecular recognition capability. Proteins are specifically involved in both collecting and transporting raw materials and interacting with ions. Proteins systematically undergo self- and co-assembly to yield short- and long-range ordered nuclei, substrates and other cellular organelles, as well as to catalyze reactions. The precise molecular recognition and the self-assembly exhibited in these interactions are an outcome of evolutionary process, where proteins have undergone cycles of structural fittings that lead to improved specific interactions. In the last decade, peptides have been utilized as critical building blocks to mimic biomolecular capabilities of proteins and to develop unique novel hybrid materials for a variety of practical applications. Here in, we summarize the inspirations that allow engineers to mimic biomolecular processes and the utility of combinatorial biology-based library systems to screen peptides for materials. Finally, we provide examples of addressable assembly on a variety of surfaces leading to self-organized hybrid systems that employ peptides fused to different functional proteins as building blocks for materials specificity.

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Literature
go back to reference Aizenberg J, Lambert G, Weiner S, Addadi L (2002) Factors involved in the formation of amorphous and crystalline calcium carbonate: a study of an ascidian skeleton. J Am Chem Soc 124 (1):32–39. doi: 10.​1021/​Ja016990l Aizenberg J, Lambert G, Weiner S, Addadi L (2002) Factors involved in the formation of amorphous and crystalline calcium carbonate: a study of an ascidian skeleton. J Am Chem Soc 124 (1):32–39. doi: 10.​1021/​Ja016990l
go back to reference Aizenberg J, Weaver JC, Thanawala MS, Sundar VC, Morse DE, Fratzl P (2005) Skeleton of euplectella sp.: structural hierarchy from the nanoscale to the macroscale. Science 309 (5732):275–278. doi: 10.​1126/​Science.​1112255 Aizenberg J, Weaver JC, Thanawala MS, Sundar VC, Morse DE, Fratzl P (2005) Skeleton of euplectella sp.: structural hierarchy from the nanoscale to the macroscale. Science 309 (5732):275–278. doi: 10.​1126/​Science.​1112255
go back to reference Akdim B, Pachter R, Kim SS, Naik RR, Walsh TR, Trohalaki S, Hong GY, Kuang ZF, Farmer BL (2013) Electronic properties of a graphene device with peptide adsorption: insight from simulation. Acs Appl Mater Interfaces 5(15):7470–7477. doi: 10.​1021/​am401731c Akdim B, Pachter R, Kim SS, Naik RR, Walsh TR, Trohalaki S, Hong GY, Kuang ZF, Farmer BL (2013) Electronic properties of a graphene device with peptide adsorption: insight from simulation. Acs Appl Mater Interfaces 5(15):7470–7477. doi: 10.​1021/​am401731c
go back to reference Alberts B (2002) Molecular biology of the cell, 4th edn. Garland Science, New York Alberts B (2002) Molecular biology of the cell, 4th edn. Garland Science, New York
go back to reference Alivisatos AP, Gu WW, Larabell C (2005) Quantum dots as cellular probes. Annu Rev Biomed Eng 7:55–76 Alivisatos AP, Gu WW, Larabell C (2005) Quantum dots as cellular probes. Annu Rev Biomed Eng 7:55–76
go back to reference Anker JN, Hall WP, Lyandres O, Shah NC, Zhao J, Van Duyne RP (2008) Biosensing with plasmonic nanosensors. Nat Mater 7(6):442–453. doi: 10.​1038/​Nmat2162 Anker JN, Hall WP, Lyandres O, Shah NC, Zhao J, Van Duyne RP (2008) Biosensing with plasmonic nanosensors. Nat Mater 7(6):442–453. doi: 10.​1038/​Nmat2162
go back to reference Avramescu A, Andreescu S, Noguer T, Bala C, Andreescu D, Marty JL (2002) Biosensors designed for environmental and food quality control based on screen-printed graphite electrodes with different configurations. Anal Bioanal Chem 374(1):25–32. doi: 10.​1007/​S00216-002-1312-0 Avramescu A, Andreescu S, Noguer T, Bala C, Andreescu D, Marty JL (2002) Biosensors designed for environmental and food quality control based on screen-printed graphite electrodes with different configurations. Anal Bioanal Chem 374(1):25–32. doi: 10.​1007/​S00216-002-1312-0
go back to reference Barton SC, Gallaway J, Atanassov P (2004) Enzymatic biofuel cells for implantable and microscale devices. Chem Rev 104(10):4867–4886. doi: 10.​1021/​Cr020719k Barton SC, Gallaway J, Atanassov P (2004) Enzymatic biofuel cells for implantable and microscale devices. Chem Rev 104(10):4867–4886. doi: 10.​1021/​Cr020719k
go back to reference Berman A, Addadi L, Weiner S (1988) Interactions of Sea-Urchin skeleton macromolecules with growing calcite crystals—a study of intracrystalline proteins. Nature 331(6156):546–548 Berman A, Addadi L, Weiner S (1988) Interactions of Sea-Urchin skeleton macromolecules with growing calcite crystals—a study of intracrystalline proteins. Nature 331(6156):546–548
go back to reference Boonekamp PM, Vanderweepals LJA, Vanwijkvanlennep MML, Thesing CW, Bijvoet OLM (1986) 2 Modes of action of bisphosphonates on osteoclastic resorption of mineralized matrix. J Bone Miner Res 1(1):27–39 Boonekamp PM, Vanderweepals LJA, Vanwijkvanlennep MML, Thesing CW, Bijvoet OLM (1986) 2 Modes of action of bisphosphonates on osteoclastic resorption of mineralized matrix. J Bone Miner Res 1(1):27–39
go back to reference Braux J, Guillaume C, Jallot E, Nedelec JM, Laurent-Maquin D, Laquerriere P (2009) Effect of strontium treatment on human primary osteoblasts. hydroxyapatite: a drug delivery system?. Int J Artif Organs 32 (7):458 Braux J, Guillaume C, Jallot E, Nedelec JM, Laurent-Maquin D, Laquerriere P (2009) Effect of strontium treatment on human primary osteoblasts. hydroxyapatite: a drug delivery system?. Int J Artif Organs 32 (7):458
go back to reference Brott LL, Naik RR, Pikas DJ, Kirkpatrick SM, Tomlin DW, Whitlock PW, Clarson SJ, Stone MO (2001) Ultrafast holographic nanopatterning of biocatalytically formed silica. Nature 413(6853):291–293. doi: 10.​1038/​35095031 Brott LL, Naik RR, Pikas DJ, Kirkpatrick SM, Tomlin DW, Whitlock PW, Clarson SJ, Stone MO (2001) Ultrafast holographic nanopatterning of biocatalytically formed silica. Nature 413(6853):291–293. doi: 10.​1038/​35095031
go back to reference Cariolou MA, Morse DE (1988) Purification and characterization of calcium-binding conchiolin shell peptides from the mollusc, Haliotis rufescens, as a function of development. Journal of Comparative Physiology B-Biochemical Systemic and Environmental. Physiology 157(6):717–729 Cariolou MA, Morse DE (1988) Purification and characterization of calcium-binding conchiolin shell peptides from the mollusc, Haliotis rufescens, as a function of development. Journal of Comparative Physiology B-Biochemical Systemic and Environmental. Physiology 157(6):717–729
go back to reference Cetinel S, Caliskan HB, Yucesoy DT, Donatan AS, Yuca E, Urgen M, Karaguler NG, Tamerler C (2013) Addressable self-immobilization of lactate dehydrogenase across multiple length scales. Biotechnol J 8(2):262–272. doi: 10.​1002/​Biot00502 Cetinel S, Caliskan HB, Yucesoy DT, Donatan AS, Yuca E, Urgen M, Karaguler NG, Tamerler C (2013) Addressable self-immobilization of lactate dehydrogenase across multiple length scales. Biotechnol J 8(2):262–272. doi: 10.​1002/​Biot00502
go back to reference Chaubey A, Gerard M, Singhal R, Singh VS, Malhotra BD (2000) Immobilization of lactate dehydrogenase on electrochemically prepared polypyrrole-polyvinylsulphonate composite films for application to lactate biosensors. Electrochim Acta 46(5):723–729 Chaubey A, Gerard M, Singhal R, Singh VS, Malhotra BD (2000) Immobilization of lactate dehydrogenase on electrochemically prepared polypyrrole-polyvinylsulphonate composite films for application to lactate biosensors. Electrochim Acta 46(5):723–729
go back to reference Chen Y, Munechika K, Ginger DS (2007) Dependence of fluorescence intensity on the spectral overlap between fluorophores and plasmon resonant single silver nanoparticles. Nano Lett 7(3):690–696. doi: 10.​1021/​Nl062795z Chen Y, Munechika K, Ginger DS (2007) Dependence of fluorescence intensity on the spectral overlap between fluorophores and plasmon resonant single silver nanoparticles. Nano Lett 7(3):690–696. doi: 10.​1021/​Nl062795z
go back to reference Coyle BL, Rolandi M, Baneyx F (2013) Carbon-Binding Designer Proteins that Discriminate between sp(2)- and sp(3)-Hybridized Carbon Surfaces. Langmuir 29(15):4839–4846. doi: 10.​1021/​la4000846 Coyle BL, Rolandi M, Baneyx F (2013) Carbon-Binding Designer Proteins that Discriminate between sp(2)- and sp(3)-Hybridized Carbon Surfaces. Langmuir 29(15):4839–4846. doi: 10.​1021/​la4000846
go back to reference Dai HX, Choe WS, Thai CK, Sarikaya M, Traxler BA, Baneyx F, Schwartz DT (2005) Nonequilibrium synthesis and assembly of hybrid inorganic-protein nanostructures using an engineered DNA binding protein. J Am Chem Soc 127(44):15637–15643. doi: 10.​1021/​ja055499h Dai HX, Choe WS, Thai CK, Sarikaya M, Traxler BA, Baneyx F, Schwartz DT (2005) Nonequilibrium synthesis and assembly of hybrid inorganic-protein nanostructures using an engineered DNA binding protein. J Am Chem Soc 127(44):15637–15643. doi: 10.​1021/​ja055499h
go back to reference Endo T, Kerman K, Nagatani N, Hiepa HM, Kim DK, Yonezawa Y, Nakano K, Tamiya E (2006) Multiple label-free detection of antigen-antibody reaction using localized surface plasmon resonance-based core-shell structured nanoparticle layer nanochip. Anal Chem 78(18):6465–6475. doi: 10.​1021/​Ac0608321 Endo T, Kerman K, Nagatani N, Hiepa HM, Kim DK, Yonezawa Y, Nakano K, Tamiya E (2006) Multiple label-free detection of antigen-antibody reaction using localized surface plasmon resonance-based core-shell structured nanoparticle layer nanochip. Anal Chem 78(18):6465–6475. doi: 10.​1021/​Ac0608321
go back to reference Endo T, Kerman K, Nagatani N, Takamura Y, Tamiya E (2005) Label-free detection of peptide nucleic acid-DNA hybridization using localized surface plasmon resonance based optical biosensor. Anal Chem 77(21):6976–6984. doi: 10.​1021/​Ac0513459 Endo T, Kerman K, Nagatani N, Takamura Y, Tamiya E (2005) Label-free detection of peptide nucleic acid-DNA hybridization using localized surface plasmon resonance based optical biosensor. Anal Chem 77(21):6976–6984. doi: 10.​1021/​Ac0513459
go back to reference Flynn NT, Tran TNT, Cima MJ, Langer R (2003) Long-term stability of self-assembled monolayers in biological media. Langmuir 19(26):10909–10915. doi: 10.​1021/​La035331e Flynn NT, Tran TNT, Cima MJ, Langer R (2003) Long-term stability of self-assembled monolayers in biological media. Langmuir 19(26):10909–10915. doi: 10.​1021/​La035331e
go back to reference Frascione N, Codina-Barrios A, Bassindale AR, Taylor PG (2013) Enhancing in vitro selection techniques to assist the discovery, understanding and use of inorganic binding peptides. Dalton Trans 42(28):10337–10346. doi: 10.​1039/​c3dt50541c Frascione N, Codina-Barrios A, Bassindale AR, Taylor PG (2013) Enhancing in vitro selection techniques to assist the discovery, understanding and use of inorganic binding peptides. Dalton Trans 42(28):10337–10346. doi: 10.​1039/​c3dt50541c
go back to reference Fujiwara K, Watarai H, Itoh H, Nakahama E, Ogawa N (2006) Measurement of antibody binding to protein immobilized on gold nanoparticles by localized surface plasmon spectroscopy. Anal Bioanal Chem 386(3):639–644. doi: 10.​1007/​s00216-006-0559-2 Fujiwara K, Watarai H, Itoh H, Nakahama E, Ogawa N (2006) Measurement of antibody binding to protein immobilized on gold nanoparticles by localized surface plasmon spectroscopy. Anal Bioanal Chem 386(3):639–644. doi: 10.​1007/​s00216-006-0559-2
go back to reference Gaskin DJH, Starck K, Vulfson EN (2000) Identification of inorganic crystal-specific sequences using phage display combinatorial library of short peptides: a feasibility study. Biotechnol Lett 22(15):1211–1216 Gaskin DJH, Starck K, Vulfson EN (2000) Identification of inorganic crystal-specific sequences using phage display combinatorial library of short peptides: a feasibility study. Biotechnol Lett 22(15):1211–1216
go back to reference Grosh CD, Schwartz DT, Baneyx F (2009) Protein-Based control of silver growth habit using electrochemical deposition. Cryst Growth Des 9(10):4401–4406. doi: 10.​1021/​Cg9004196 Grosh CD, Schwartz DT, Baneyx F (2009) Protein-Based control of silver growth habit using electrochemical deposition. Cryst Growth Des 9(10):4401–4406. doi: 10.​1021/​Cg9004196
go back to reference Gungormus M, Fong H, Kim IW, Evans JS, Tamerler C, Sarikaya M (2008) Regulation of in vitro calcium phosphate mineralization by combinatorially selected hydroxyapatite-binding peptides. Biomacromolecules 9(3):966–973. doi: 10.​1021/​bm701037x Gungormus M, Fong H, Kim IW, Evans JS, Tamerler C, Sarikaya M (2008) Regulation of in vitro calcium phosphate mineralization by combinatorially selected hydroxyapatite-binding peptides. Biomacromolecules 9(3):966–973. doi: 10.​1021/​bm701037x
go back to reference Haes AJ, Zou SL, Schatz GC, Van Duyne RP (2004) A nanoscale optical biosensor: the long range distance dependence of the localized surface plasmon resonance of noble metal nanoparticles. J Phys Chem B 108(1):109–116. doi: 10.​1021/​Jp0361327 Haes AJ, Zou SL, Schatz GC, Van Duyne RP (2004) A nanoscale optical biosensor: the long range distance dependence of the localized surface plasmon resonance of noble metal nanoparticles. J Phys Chem B 108(1):109–116. doi: 10.​1021/​Jp0361327
go back to reference Hanks SK, Quinn AM, T. H (1988) The protein kinase family: conserved features and deduced phylogeny of the catalytic domains. Science 241:42-52 Hanks SK, Quinn AM, T. H (1988) The protein kinase family: conserved features and deduced phylogeny of the catalytic domains. Science 241:42-52
go back to reference Hardman R (2006) A toxicologic review of quantum dots: toxicity depends on physicochemical and environmental factors. Environ Health Perspect 114(2):165–172 MathSciNet Hardman R (2006) A toxicologic review of quantum dots: toxicity depends on physicochemical and environmental factors. Environ Health Perspect 114(2):165–172 MathSciNet
go back to reference Hashimoto K, Yoshinari M, Matsuzaka K, Shiba K, Inoue T (2011) Identification of peptide motif that binds to the surface of zirconia. Dent Mater J 30(6):935–940. doi: 10.​4012/​dmj.​2011-161 Hashimoto K, Yoshinari M, Matsuzaka K, Shiba K, Inoue T (2011) Identification of peptide motif that binds to the surface of zirconia. Dent Mater J 30(6):935–940. doi: 10.​4012/​dmj.​2011-161
go back to reference Hnilova M, Karaca BT, Park J, Jia C, Wilson BR, Sarikaya M, Tamerler C (2012a) Fabrication of hierarchical hybrid structures using bio-enabled layer-by-layer self-assembly. Biotechnol Bioeng 109(5):1120–1130. doi: 10.​1002/​bit.​24405 Hnilova M, Karaca BT, Park J, Jia C, Wilson BR, Sarikaya M, Tamerler C (2012a) Fabrication of hierarchical hybrid structures using bio-enabled layer-by-layer self-assembly. Biotechnol Bioeng 109(5):1120–1130. doi: 10.​1002/​bit.​24405
go back to reference Hnilova M, Khatayevich D, Carlson A, Oren EE, Gresswell C, Zheng S, Ohuchi F, Sarikaya M, Tamerler C (2012b) Single-step fabrication of patterned gold film array by an engineered multi-functional peptide. J Colloid Interface Sci 365(1):97–102. doi: 10.​1016/​j.​jcis.​2011.​09.​006 Hnilova M, Khatayevich D, Carlson A, Oren EE, Gresswell C, Zheng S, Ohuchi F, Sarikaya M, Tamerler C (2012b) Single-step fabrication of patterned gold film array by an engineered multi-functional peptide. J Colloid Interface Sci 365(1):97–102. doi: 10.​1016/​j.​jcis.​2011.​09.​006
go back to reference Hnilova M, Liu X, Yuca E, Jia C, Wilson B, Karatas AY, Gresswell C, Ohuchi F, Kitamura K, Tamerler C (2012c) Multifunctional protein-enabled patterning on arrayed ferroelectric materials. Acs Appl Mater Inter 4(4):1865–1871. doi: 10.​1021/​Am300177t Hnilova M, Liu X, Yuca E, Jia C, Wilson B, Karatas AY, Gresswell C, Ohuchi F, Kitamura K, Tamerler C (2012c) Multifunctional protein-enabled patterning on arrayed ferroelectric materials. Acs Appl Mater Inter 4(4):1865–1871. doi: 10.​1021/​Am300177t
go back to reference Hnilova M, Oren EE, Seker UOS, Wilson BR, Collino S, Evans JS, Tamerler C, Sarikaya M (2008) Effect of molecular conformations on the adsorption behavior of gold-binding peptides. Langmuir 24(21):12440–12445. doi: 10.​1021/​La801468c Hnilova M, Oren EE, Seker UOS, Wilson BR, Collino S, Evans JS, Tamerler C, Sarikaya M (2008) Effect of molecular conformations on the adsorption behavior of gold-binding peptides. Langmuir 24(21):12440–12445. doi: 10.​1021/​La801468c
go back to reference Iipman HJ (1935) Staining the skeleton of cleared embryos with alizarin red S. Stain Technol 10(2):61–63 Iipman HJ (1935) Staining the skeleton of cleared embryos with alizarin red S. Stain Technol 10(2):61–63
go back to reference Ishikawa K, Yamada K, Kumagai S, Sano KI, Shiba K, Yamashita I, Kobayashi M (2008) Adsorption properties of a gold-binding peptide assessed by its attachment to a recombinant apoferritin molecule. Appl Phys Express 1 (3): 034006-1–034006-3. doi: 10.​1143/​Apex.​1.​034006 Ishikawa K, Yamada K, Kumagai S, Sano KI, Shiba K, Yamashita I, Kobayashi M (2008) Adsorption properties of a gold-binding peptide assessed by its attachment to a recombinant apoferritin molecule. Appl Phys Express 1 (3): 034006-1–034006-3. doi: 10.​1143/​Apex.​1.​034006
go back to reference Kacar T, Ray J, Gungormus M, Oren EE, Tamerler C, Sarikaya M (2009a) Quartz binding peptides as molecular linkers towards fabricating multifunctional micropatterned substrates. Adv Mater 21(3):295–299. doi: 10.​1002/​Adma01877 Kacar T, Ray J, Gungormus M, Oren EE, Tamerler C, Sarikaya M (2009a) Quartz binding peptides as molecular linkers towards fabricating multifunctional micropatterned substrates. Adv Mater 21(3):295–299. doi: 10.​1002/​Adma01877
go back to reference Kacar T, Zin MT, So C, Wilson B, Ma H, Gul-Karaguler N, Jen AKY, Sarikaya M, Tamerler C (2009b) Directed self-immobilization of alkaline phosphatase on micro-patterned substrates via genetically fused metal-binding peptide. Biotechnol Bioeng 103(4):696–705. doi: 10.​1002/​bit.​22282 Kacar T, Zin MT, So C, Wilson B, Ma H, Gul-Karaguler N, Jen AKY, Sarikaya M, Tamerler C (2009b) Directed self-immobilization of alkaline phosphatase on micro-patterned substrates via genetically fused metal-binding peptide. Biotechnol Bioeng 103(4):696–705. doi: 10.​1002/​bit.​22282
go back to reference Kasaj A, Willershausen B, Reichert C, Gortan-Kasaj A, Zafiropoulos GG (2008) Schmidt M (2008) Human periodontal fibroblast response to a nanostructured hydroxyapatite bone replacement graft in vitro. Arch Oral Biol 53(7):683–689. doi: 10.​1016/​J.​Archoralbio.​01.​009 Kasaj A, Willershausen B, Reichert C, Gortan-Kasaj A, Zafiropoulos GG (2008) Schmidt M (2008) Human periodontal fibroblast response to a nanostructured hydroxyapatite bone replacement graft in vitro. Arch Oral Biol 53(7):683–689. doi: 10.​1016/​J.​Archoralbio.​01.​009
go back to reference Krauland EM, Peelle BR, Wittrup KD, Belcher AM (2007) Peptide tags for enhanced cellular and protein adhesion to single-crystal line sapphire. Biotechnol Bioeng 97(5):1009–1020. doi: 10.​1002/​bit.​21341 Krauland EM, Peelle BR, Wittrup KD, Belcher AM (2007) Peptide tags for enhanced cellular and protein adhesion to single-crystal line sapphire. Biotechnol Bioeng 97(5):1009–1020. doi: 10.​1002/​bit.​21341
go back to reference Lee SW, Mao CB, Flynn CE, Belcher AM (2002) Ordering of quantum dots using genetically engineered viruses. Science 296(5569):892–895 Lee SW, Mao CB, Flynn CE, Belcher AM (2002) Ordering of quantum dots using genetically engineered viruses. Science 296(5569):892–895
go back to reference Levy R, Thanh NTK, Doty RC, Hussain I, Nichols RJ, Schiffrin DJ, Brust M, Fernig DG (2004) Rational and combinatorial design of peptide capping ligands for gold nanoparticles. J Am Chem Soc 126(32):10076–10084. doi: 10.​1021/​Ja0487269 Levy R, Thanh NTK, Doty RC, Hussain I, Nichols RJ, Schiffrin DJ, Brust M, Fernig DG (2004) Rational and combinatorial design of peptide capping ligands for gold nanoparticles. J Am Chem Soc 126(32):10076–10084. doi: 10.​1021/​Ja0487269
go back to reference Lowenstam HA, Weiner S (1989) On biomineralization. Oxford University Press, New York Lowenstam HA, Weiner S (1989) On biomineralization. Oxford University Press, New York
go back to reference Lu ZJ, Murray KS, Vancleave V, Lavallie ER, Stahl ML, Mccoy JM (1995) Expression of thioredoxin random peptide libraries on the escherichia-coli cell-surface as functional fusions to flagellin—a system designed for exploring protein-protein interactions. Bio-Technol 13(4):366–372. doi: 10.​1038/​Nbt0495-366 Lu ZJ, Murray KS, Vancleave V, Lavallie ER, Stahl ML, Mccoy JM (1995) Expression of thioredoxin random peptide libraries on the escherichia-coli cell-surface as functional fusions to flagellin—a system designed for exploring protein-protein interactions. Bio-Technol 13(4):366–372. doi: 10.​1038/​Nbt0495-366
go back to reference Ma MY, Zhu YJ, Li L, Cao SW (2008) Nanostructured porous hollow ellipsoidal capsules of hydroxyapatite and calcium silicate: preparation and application in drug delivery. J Mater Chem 18(23):2722–2727. doi: 10.​1039/​B800389k Ma MY, Zhu YJ, Li L, Cao SW (2008) Nanostructured porous hollow ellipsoidal capsules of hydroxyapatite and calcium silicate: preparation and application in drug delivery. J Mater Chem 18(23):2722–2727. doi: 10.​1039/​B800389k
go back to reference Mann S (1996) Biomimetic materials chemistry. VCH, New York Mann S (1996) Biomimetic materials chemistry. VCH, New York
go back to reference Marzouk SAM, Cosofret VV, Buck RP, Yang H, Cascio WE, Hassan SSM (1997) A conducting salt-based amperometric biosensor for measurement of extracellular lactate accumulation in ischemic myocardium. Anal Chem 69(14):2646–2652. doi: 10.​1021/​Ac970020s Marzouk SAM, Cosofret VV, Buck RP, Yang H, Cascio WE, Hassan SSM (1997) A conducting salt-based amperometric biosensor for measurement of extracellular lactate accumulation in ischemic myocardium. Anal Chem 69(14):2646–2652. doi: 10.​1021/​Ac970020s
go back to reference Matmor M, Ashkenasy N (2012) Modulating semiconductor surface electronic properties by inorganic peptide-binders sequence Design. J Am Chem Soc 134(50):20403–20411. doi: 10.​1021/​ja3078494 Matmor M, Ashkenasy N (2012) Modulating semiconductor surface electronic properties by inorganic peptide-binders sequence Design. J Am Chem Soc 134(50):20403–20411. doi: 10.​1021/​ja3078494
go back to reference Myers LE, Miller GD, Eckardt RC, Fejer MM, Byer RL (1995) Quasi-Phase-Matched 1.064-Mu-M-Pumped optical parametric oscillator in bulk periodically poled Linbo3. Opt Lett 20(1):52–54 Myers LE, Miller GD, Eckardt RC, Fejer MM, Byer RL (1995) Quasi-Phase-Matched 1.064-Mu-M-Pumped optical parametric oscillator in bulk periodically poled Linbo3. Opt Lett 20(1):52–54
go back to reference Naik RR, Stringer SJ, Agarwal G, Jones SE, Stone MO (2002) Biomimetic synthesis and patterning of silver nanoparticles. Nat Mater 1(3):169–172. doi: 10.​1038/​Nmat758 Naik RR, Stringer SJ, Agarwal G, Jones SE, Stone MO (2002) Biomimetic synthesis and patterning of silver nanoparticles. Nat Mater 1(3):169–172. doi: 10.​1038/​Nmat758
go back to reference Nath N, Chilkoti A (2002) A colorimetric gold nanoparticle sensor to interrogate biomolecular interactions in real time on a surface. Anal Chem 74(3):504–509. doi: 10.​1021/​Ac015657x Nath N, Chilkoti A (2002) A colorimetric gold nanoparticle sensor to interrogate biomolecular interactions in real time on a surface. Anal Chem 74(3):504–509. doi: 10.​1021/​Ac015657x
go back to reference Nath N, Chilkoti A (2004) Label-free biosensing by surface plasmon resonance of nanoparticles on glass: optimization of nanoparticle size. Anal Chem 76(18):5370–5378. doi: 10.​1021/​Ac049741z Nath N, Chilkoti A (2004) Label-free biosensing by surface plasmon resonance of nanoparticles on glass: optimization of nanoparticle size. Anal Chem 76(18):5370–5378. doi: 10.​1021/​Ac049741z
go back to reference Notman R, Oren EE, Tamerler C, Sarikaya M, Samudrala R, Walsh TR (2010) Solution study of engineered quartz binding peptides using replica exchange molecular dynamics. Biomacromolecules 11(12):3266–3274. doi: 10.​1021/​bm100646z Notman R, Oren EE, Tamerler C, Sarikaya M, Samudrala R, Walsh TR (2010) Solution study of engineered quartz binding peptides using replica exchange molecular dynamics. Biomacromolecules 11(12):3266–3274. doi: 10.​1021/​bm100646z
go back to reference Nykypanchuk D, Maye MM, van der Lelie D, Gang O (2008) DNA-guided crystallization of colloidal nanoparticles. Nature 451(7178):549–552. doi: 10.​1038/​Nature06560 Nykypanchuk D, Maye MM, van der Lelie D, Gang O (2008) DNA-guided crystallization of colloidal nanoparticles. Nature 451(7178):549–552. doi: 10.​1038/​Nature06560
go back to reference Oren EE, Notman R, Kim IW, Evans JS, Walsh TR, Samudrala R, Tamerler C, Sarikaya M (2010) Probing the molecular mechanisms of quartz-binding peptides. Langmuir 26(13):11003–11009. doi: 10.​1021/​la100049s Oren EE, Notman R, Kim IW, Evans JS, Walsh TR, Samudrala R, Tamerler C, Sarikaya M (2010) Probing the molecular mechanisms of quartz-binding peptides. Langmuir 26(13):11003–11009. doi: 10.​1021/​la100049s
go back to reference Ostuni E, Yan L, Whitesides GM (1999) The interaction of proteins and cells with self-assembled monolayers of alkanethiolates on gold and silver. Colloid Surface B 15(1):3–30. doi: 10.​1016/​S0927-7765(99)00004-1 Ostuni E, Yan L, Whitesides GM (1999) The interaction of proteins and cells with self-assembled monolayers of alkanethiolates on gold and silver. Colloid Surface B 15(1):3–30. doi: 10.​1016/​S0927-7765(99)00004-1
go back to reference Palmisano F, Rizzi R, Centonze D, Zambonin PG (2000) Simultaneous monitoring of glucose and lactate by an interference and cross-talk free dual electrode amperometric biosensor based on electropolymerized thin films. Biosens Bioelectron 15(9–10):531–539. doi: 10.​1016/​S0956-5663(00)00107-X Palmisano F, Rizzi R, Centonze D, Zambonin PG (2000) Simultaneous monitoring of glucose and lactate by an interference and cross-talk free dual electrode amperometric biosensor based on electropolymerized thin films. Biosens Bioelectron 15(9–10):531–539. doi: 10.​1016/​S0956-5663(00)00107-X
go back to reference Park MH, Ofir Y, Samanta B, Arumugam P, Miranda OR, Rotello VM (2008a) Nanoparticle immobilization on surfaces via activatable heterobifunctional dithiocarbamate bond formation. Adv Mater 20 (21):4185–4188. doi: 10.​1002/​Adma.​200801155 Park MH, Ofir Y, Samanta B, Arumugam P, Miranda OR, Rotello VM (2008a) Nanoparticle immobilization on surfaces via activatable heterobifunctional dithiocarbamate bond formation. Adv Mater 20 (21):4185–4188. doi: 10.​1002/​Adma.​200801155
go back to reference Park SY, Lytton-Jean AKR, Lee B, Weigand S, Schatz GC, Mirkin CA (2008b) DNA-programmable nanoparticle crystallization. Nature 451(7178):553–556. doi: 10.​1038/​Nature06508 Park SY, Lytton-Jean AKR, Lee B, Weigand S, Schatz GC, Mirkin CA (2008b) DNA-programmable nanoparticle crystallization. Nature 451(7178):553–556. doi: 10.​1038/​Nature06508
go back to reference Park TJ, Lee SY, Lee SJ, Park JP, Yang KS, Lee KB, Ko S, Park JB, Kim T, Kim SK, Shin YB, Chung BH, Ku SJ, Kim DH, Choi IS (2006) Protein nanopatterns and biosensors using gold binding polypeptide as a fusion partner. Anal Chem 78(20):7197–7205. doi: 10.​1021/​Ac060976f Park TJ, Lee SY, Lee SJ, Park JP, Yang KS, Lee KB, Ko S, Park JB, Kim T, Kim SK, Shin YB, Chung BH, Ku SJ, Kim DH, Choi IS (2006) Protein nanopatterns and biosensors using gold binding polypeptide as a fusion partner. Anal Chem 78(20):7197–7205. doi: 10.​1021/​Ac060976f
go back to reference Prodan E, Nordlander P, Halas NJ (2003) Effects of dielectric screening on the optical properties of metallic nanoshells. Chem Phys Lett 368 (1-2):94-101. [Pii] S0009-2614(02)01828-6. doi: 10.​1016/​S0009-2614(02)01828-6 Prodan E, Nordlander P, Halas NJ (2003) Effects of dielectric screening on the optical properties of metallic nanoshells. Chem Phys Lett 368 (1-2):94-101. [Pii] S0009-2614(02)01828-6. doi: 10.​1016/​S0009-2614(02)01828-6
go back to reference Puddu V, Slocik JM, Naik RR, Perry CC (2013) Titania binding peptides as templates in the biomimetic synthesis of stable titania nanosols: insight into the role of buffers in peptide-mediated mineralization. Langmuir 29(30):9464–9472. doi: 10.​1021/​la401777x Puddu V, Slocik JM, Naik RR, Perry CC (2013) Titania binding peptides as templates in the biomimetic synthesis of stable titania nanosols: insight into the role of buffers in peptide-mediated mineralization. Langmuir 29(30):9464–9472. doi: 10.​1021/​la401777x
go back to reference Rasmussen BA, Bush K, Tally FP (1993) Antimicrobial resistance in bacteroides. Clin Infect Dis 16:S390–S400 Rasmussen BA, Bush K, Tally FP (1993) Antimicrobial resistance in bacteroides. Clin Infect Dis 16:S390–S400
go back to reference Rothenstein D, Claasen B, Omiecienski B, Lammel P, Bill J (2012) Isolation of ZnO-Binding 12-mer peptides and determination of their binding epitopes by nmr spectroscopy. J Am Chem Soc 134(30):12547–12556. doi: 10.​1021/​ja302211w Rothenstein D, Claasen B, Omiecienski B, Lammel P, Bill J (2012) Isolation of ZnO-Binding 12-mer peptides and determination of their binding epitopes by nmr spectroscopy. J Am Chem Soc 134(30):12547–12556. doi: 10.​1021/​ja302211w
go back to reference Sanchez C, Arribart H, Guille MMG (2005) Biomimetism and bioinspiration as tools for the design of innovative materials and systems. Nat Mater 4(4):277–288. doi: 10.​1038/​Nmat1339 Sanchez C, Arribart H, Guille MMG (2005) Biomimetism and bioinspiration as tools for the design of innovative materials and systems. Nat Mater 4(4):277–288. doi: 10.​1038/​Nmat1339
go back to reference Sano KI, Sasaki H, Shiba K (2005) Specificity and biomineralization activities of Ti-binding peptide-1 (TBP-1). Langmuir 21(7):3090–3095. doi: 10.​1021/​La047428m Sano KI, Sasaki H, Shiba K (2005) Specificity and biomineralization activities of Ti-binding peptide-1 (TBP-1). Langmuir 21(7):3090–3095. doi: 10.​1021/​La047428m
go back to reference Sarikaya M, Aksay IA (1995) Biomimetics: design and processing of materials. IP Press, Woodbury Sarikaya M, Aksay IA (1995) Biomimetics: design and processing of materials. IP Press, Woodbury
go back to reference Sarikaya M, Tamerler C, Jen AKY, Schulten K, Baneyx F (2003) Molecular biomimetics: nanotechnology through biology. Nat Mater 2(9):577–585. doi: 10.​1038/​Nmat964 Sarikaya M, Tamerler C, Jen AKY, Schulten K, Baneyx F (2003) Molecular biomimetics: nanotechnology through biology. Nat Mater 2(9):577–585. doi: 10.​1038/​Nmat964
go back to reference Schultzelam S, Harauz G, Beveridge TJ (1992) Participation of a cyanobacterial S layer in fine-grain mineral formation. J Bacteriol 174(24):7971–7981 Schultzelam S, Harauz G, Beveridge TJ (1992) Participation of a cyanobacterial S layer in fine-grain mineral formation. J Bacteriol 174(24):7971–7981
go back to reference Sedlak RH, Hnilova M, Gachelet E, Przybyla L, Dranow D, Gonen T, Sarikaya M, Tamerler C, Traxler B (2010) An engineered DNA-Binding protein self-assembles metallic nanostructures. ChemBioChem 11(15):2108–2112. doi: 10.​1002/​Cbic00407 Sedlak RH, Hnilova M, Gachelet E, Przybyla L, Dranow D, Gonen T, Sarikaya M, Tamerler C, Traxler B (2010) An engineered DNA-Binding protein self-assembles metallic nanostructures. ChemBioChem 11(15):2108–2112. doi: 10.​1002/​Cbic00407
go back to reference Sedlak RH, Hnilova M, Grosh C, Fong H, Baneyx F, Schwartz D, Sarikaya M, Tamerler C, Traxler B (2012) Engineered escherichia coli silver-binding periplasmic protein that promotes silver tolerance. Appl Environ Microbiol 78(7):2289–2296. doi: 10.​1128/​aem.​06823-11 Sedlak RH, Hnilova M, Grosh C, Fong H, Baneyx F, Schwartz D, Sarikaya M, Tamerler C, Traxler B (2012) Engineered escherichia coli silver-binding periplasmic protein that promotes silver tolerance. Appl Environ Microbiol 78(7):2289–2296. doi: 10.​1128/​aem.​06823-11
go back to reference Seker UOS, Wilson B, Dincer S, Kim IW, Oren EE, Evans JS, Tamerler C, Sarikaya M (2007) Adsorption behavior of linear and cyclic genetically engineered platinum binding peptides. Langmuir 23(15):7895–7900. doi: 10.​1021/​la700446g Seker UOS, Wilson B, Dincer S, Kim IW, Oren EE, Evans JS, Tamerler C, Sarikaya M (2007) Adsorption behavior of linear and cyclic genetically engineered platinum binding peptides. Langmuir 23(15):7895–7900. doi: 10.​1021/​la700446g
go back to reference Sengupta A, Thai CK, Sastry MSR, Matthaei JF, Schwartz DT, Davis EJ, Baneyx F (2008) A genetic approach for controlling the binding and orientation of proteins on nanoparticles. Langmuir 24(5):2000–2008. doi: 10.​1021/​La702079e Sengupta A, Thai CK, Sastry MSR, Matthaei JF, Schwartz DT, Davis EJ, Baneyx F (2008) A genetic approach for controlling the binding and orientation of proteins on nanoparticles. Langmuir 24(5):2000–2008. doi: 10.​1021/​La702079e
go back to reference Slocik JM, Naik RR, Stone MO, Wright DW (2005a) Viral templates for gold nanoparticle synthesis. J Mater Chem 15(7):749–753. doi: 10.​1039/​B413074j Slocik JM, Naik RR, Stone MO, Wright DW (2005a) Viral templates for gold nanoparticle synthesis. J Mater Chem 15(7):749–753. doi: 10.​1039/​B413074j
go back to reference So CR, Hayamizu Y, Yazici H, Gresswell C, Khatayevich D, Tamerler C, Sarikaya M (2012) Controlling self-assembly of engineered peptides on graphite by rational mutation. ACS Nano 6(2):1648–1656. doi: 10.​1021/​nn204631x So CR, Hayamizu Y, Yazici H, Gresswell C, Khatayevich D, Tamerler C, Sarikaya M (2012) Controlling self-assembly of engineered peptides on graphite by rational mutation. ACS Nano 6(2):1648–1656. doi: 10.​1021/​nn204631x
go back to reference So CR, Kulp JL, Oren EE, Zareie H, Tamerler C, Evans JS, Sarikaya M (2009) Molecular recognition and supramolecular self-assembly of a genetically engineered gold binding peptide on Au{111}. ACS Nano 3(6):1525–1531. doi: 10.​1021/​Nn900171s So CR, Kulp JL, Oren EE, Zareie H, Tamerler C, Evans JS, Sarikaya M (2009) Molecular recognition and supramolecular self-assembly of a genetically engineered gold binding peptide on Au{111}. ACS Nano 3(6):1525–1531. doi: 10.​1021/​Nn900171s
go back to reference Suman S, Singhal R, Sharma AL, Malthotra BD, Pundir CS (2005) Development of a lactate biosensor based on conducting copolymer bound lactate oxidase. Sensor Actuat B-Chem 107(2):768–772. doi: 10.​1016/​J.​Snb.​12.​016 Suman S, Singhal R, Sharma AL, Malthotra BD, Pundir CS (2005) Development of a lactate biosensor based on conducting copolymer bound lactate oxidase. Sensor Actuat B-Chem 107(2):768–772. doi: 10.​1016/​J.​Snb.​12.​016
go back to reference Tamerler C, Duman M, Oren EE, Gungormus M, Xiong XR, Kacar T, Parviz BA, Sarikaya M (2006a) Materials specificity and directed assembly of a gold-binding peptide. Small 2(11):1372–1378. doi: 10.​1002/​Smll00070 Tamerler C, Duman M, Oren EE, Gungormus M, Xiong XR, Kacar T, Parviz BA, Sarikaya M (2006a) Materials specificity and directed assembly of a gold-binding peptide. Small 2(11):1372–1378. doi: 10.​1002/​Smll00070
go back to reference Tamerler C, Khatayevich D, Gungormus M, Kacar T, Oren EE, Hnilova M, Sarikaya M (2010) Molecular biomimetics: gepi-based biological routes to technology. Biopolymers 94(1):78–94. doi: 10.​1002/​Bip.​21368 Tamerler C, Khatayevich D, Gungormus M, Kacar T, Oren EE, Hnilova M, Sarikaya M (2010) Molecular biomimetics: gepi-based biological routes to technology. Biopolymers 94(1):78–94. doi: 10.​1002/​Bip.​21368
go back to reference Tamerler C, Oren EE, Duman M, Venkatasubramanian E, Sarikaya M (2006b) Adsorption kinetics of an engineered gold binding peptide by surface plasmon resonance spectroscopy and a quartz crystal microbalance. Langmuir 22(18):7712–7718. doi: 10.​1021/​La0606897 Tamerler C, Oren EE, Duman M, Venkatasubramanian E, Sarikaya M (2006b) Adsorption kinetics of an engineered gold binding peptide by surface plasmon resonance spectroscopy and a quartz crystal microbalance. Langmuir 22(18):7712–7718. doi: 10.​1021/​La0606897
go back to reference Tamerler C, Sarikaya M (2008) Molecular biomimetics: genetic synthesis, assembly, and formation of materials using peptides. MRS Bull 33(5):504–510. doi: 10.​1557/​Mrs2008.​102 Tamerler C, Sarikaya M (2008) Molecular biomimetics: genetic synthesis, assembly, and formation of materials using peptides. MRS Bull 33(5):504–510. doi: 10.​1557/​Mrs2008.​102
go back to reference Tamerler C, Sarikaya M (2009) Molecular biomimetics: nanotechnology and bionanotechnology using genetically engineered peptides. Philos T R Soc A 367(1894):1705–1726. doi: 10.​1098/​Rsta.​0018 Tamerler C, Sarikaya M (2009) Molecular biomimetics: nanotechnology and bionanotechnology using genetically engineered peptides. Philos T R Soc A 367(1894):1705–1726. doi: 10.​1098/​Rsta.​0018
go back to reference Tan K, Cheang P, Ho IAW, Lam PYP, Hui KM (2007) Nanosized bioceramic particles could function as efficient gene delivery vehicles with target specificity for the spleen. Gene Ther 14(10):828–835. doi: 10.​1038/​Sj.​Gt.​3302937 Tan K, Cheang P, Ho IAW, Lam PYP, Hui KM (2007) Nanosized bioceramic particles could function as efficient gene delivery vehicles with target specificity for the spleen. Gene Ther 14(10):828–835. doi: 10.​1038/​Sj.​Gt.​3302937
go back to reference Tao K, Wang JQ, Li YP, Xia DH, Shan HH, Xu H, Lu JR (2013) Short peptide-directed synthesis of one-dimensional platinum nanostructures with controllable morphologies. Scientific Reports 3. doi:256510.1038/srep02565 Tao K, Wang JQ, Li YP, Xia DH, Shan HH, Xu H, Lu JR (2013) Short peptide-directed synthesis of one-dimensional platinum nanostructures with controllable morphologies. Scientific Reports 3. doi:256510.1038/srep02565
go back to reference Thai CK, Dai HX, Sastry MSR, Sarikaya M, Schwartz DT Baneyx F (2004) Identification and characterization of Cu2O- and ZnO-binding polypeptides by escherichia coli cell surface display: toward an understanding of metal oxide binding. Biotechnol Bioeng 87(2):129–137. doi: 10.​1002/​Bit9 Thai CK, Dai HX, Sastry MSR, Sarikaya M, Schwartz DT Baneyx F (2004) Identification and characterization of Cu2O- and ZnO-binding polypeptides by escherichia coli cell surface display: toward an understanding of metal oxide binding. Biotechnol Bioeng 87(2):129–137. doi: 10.​1002/​Bit9
go back to reference Thompson DAW (1917) On growth and form. Cambridge University Press, Cambridge Thompson DAW (1917) On growth and form. Cambridge University Press, Cambridge
go back to reference Tirrell D (1994) Hierarchical structures in biology as a guide for new materials technology. Nmab, vol 464. National Academy Press, Washington Tirrell D (1994) Hierarchical structures in biology as a guide for new materials technology. Nmab, vol 464. National Academy Press, Washington
go back to reference Vincent JFV (1990) Structural biomaterials, Rev edn. Princeton University Press, Princeton Vincent JFV (1990) Structural biomaterials, Rev edn. Princeton University Press, Princeton
go back to reference Wainwright SA (1976) Mechanical design in organisms. Edward Arnold, London Wainwright SA (1976) Mechanical design in organisms. Edward Arnold, London
go back to reference Wang Y, Tang ZY, Correa-Duarte MA, Liz-Marzan LM, Kotov NA (2003) Multicolor luminescence patterning by photoactivation of semiconductor nanoparticle films. J Am Chem Soc 125(10):2830–2831. doi: 10.​1021/​Ja029231r Wang Y, Tang ZY, Correa-Duarte MA, Liz-Marzan LM, Kotov NA (2003) Multicolor luminescence patterning by photoactivation of semiconductor nanoparticle films. J Am Chem Soc 125(10):2830–2831. doi: 10.​1021/​Ja029231r
go back to reference Wang Z, Levy R, Fernig DG, Brust M (2005) The peptide route to multifunctional gold nanoparticles. Bioconjugate Chem 16(3):497–500. doi: 10.​1021/​Bc0500471 Wang Z, Levy R, Fernig DG, Brust M (2005) The peptide route to multifunctional gold nanoparticles. Bioconjugate Chem 16(3):497–500. doi: 10.​1021/​Bc0500471
go back to reference Westcott SL, Oldenburg SJ, Lee TR, Halas NJ (1998) Formation and adsorption of clusters of gold nanoparticles onto functionalized silica nanoparticle surfaces. Langmuir 14(19):5396–5401. doi: 10.​1021/​La980380q Westcott SL, Oldenburg SJ, Lee TR, Halas NJ (1998) Formation and adsorption of clusters of gold nanoparticles onto functionalized silica nanoparticle surfaces. Langmuir 14(19):5396–5401. doi: 10.​1021/​La980380q
go back to reference Weinstein RS, Roberson PK, Manolagas SC (2009) Giant osteoclast formation and long-term oral bisphosphonate therapy. N Engl J Med 360(1):53–62 Weinstein RS, Roberson PK, Manolagas SC (2009) Giant osteoclast formation and long-term oral bisphosphonate therapy. N Engl J Med 360(1):53–62
go back to reference Whaley SR, English DS, Hu EL, Barbara PF, Belcher AM (2000) Selection of peptides with semiconductor binding specificity for directed nanocrystal assembly. Nature 405(6787):665–668 Whaley SR, English DS, Hu EL, Barbara PF, Belcher AM (2000) Selection of peptides with semiconductor binding specificity for directed nanocrystal assembly. Nature 405(6787):665–668
go back to reference Willey TM, Vance AL, van Buuren T, Bostedt C, Terminello LJ Fadley CS (2005) Rapid degradation of alkanethiol-based self-assembled monolayers on gold in ambient laboratory conditions. Surf Sci 576(1–3):188–196. doi: 10.​1016/​J.​Susc.​12.​022 Willey TM, Vance AL, van Buuren T, Bostedt C, Terminello LJ Fadley CS (2005) Rapid degradation of alkanethiol-based self-assembled monolayers on gold in ambient laboratory conditions. Surf Sci 576(1–3):188–196. doi: 10.​1016/​J.​Susc.​12.​022
go back to reference Woodbury RG, Wendin C, Clendenning J, Melendez J, Elkind J, Bartholomew D, Brown S, Furlong CE (1998) Construction of biosensors using a gold-binding polypeptide and a miniature integrated surface plasmon resonance sensor. Biosens Bioelectron 13(10):1117–1126. doi: 10.​1016/​S0956-5663(98)00060-8 Woodbury RG, Wendin C, Clendenning J, Melendez J, Elkind J, Bartholomew D, Brown S, Furlong CE (1998) Construction of biosensors using a gold-binding polypeptide and a miniature integrated surface plasmon resonance sensor. Biosens Bioelectron 13(10):1117–1126. doi: 10.​1016/​S0956-5663(98)00060-8
go back to reference Xu H, Hong R, Wang XY, Arvizo R, You CC, Samanta B, Patra D, Tuominen MT, Rotello VM (2007) Controlled formation of patterned gold films via site-selective deposition of nanoparticles onto polymer-templated surfaces. Adv Mater 19 (10):1383–1386. doi: 10.​1002/​Adma.​200700124 Xu H, Hong R, Wang XY, Arvizo R, You CC, Samanta B, Patra D, Tuominen MT, Rotello VM (2007) Controlled formation of patterned gold films via site-selective deposition of nanoparticles onto polymer-templated surfaces. Adv Mater 19 (10):1383–1386. doi: 10.​1002/​Adma.​200700124
go back to reference Yang X, Kang CM, Brody M, Price CW (1996) Opposing pairs of serine protein kinases and phosphatases transmit signals of environmental stress to activate a bacterial transcription factor. Genes Dev 10(18):2265–2275 Yang X, Kang CM, Brody M, Price CW (1996) Opposing pairs of serine protein kinases and phosphatases transmit signals of environmental stress to activate a bacterial transcription factor. Genes Dev 10(18):2265–2275
go back to reference Yazici H, Fong H, Wilson B, Oren EE, Amos FA, Zhang H, Evans JS, Snead ML, Sarikaya M, Tamerler C (2013) Biological response on a titanium implant-grade surface functionalized with modular peptides. Acta Biomater 9(2):5341–5352. doi: 10.​1016/​j.​actbio.​2012.​11.​004 Yazici H, Fong H, Wilson B, Oren EE, Amos FA, Zhang H, Evans JS, Snead ML, Sarikaya M, Tamerler C (2013) Biological response on a titanium implant-grade surface functionalized with modular peptides. Acta Biomater 9(2):5341–5352. doi: 10.​1016/​j.​actbio.​2012.​11.​004
go back to reference Yuca E, Karatas AY, Seker UOS, Gungormus M, Dinler-Doganay G, Sarikaya M, Tamerler C (2011) In vitro labeling of hydroxyapatite minerals by an engineered protein. Biotechnol Bioeng 108(5):1021–1030. doi: 10.​1002/​Bit.​23041 Yuca E, Karatas AY, Seker UOS, Gungormus M, Dinler-Doganay G, Sarikaya M, Tamerler C (2011) In vitro labeling of hydroxyapatite minerals by an engineered protein. Biotechnol Bioeng 108(5):1021–1030. doi: 10.​1002/​Bit.​23041
go back to reference Zayats M, Willner B, Willner (2008) Design of amperometric biosensors and biofuel cells by the reconstitution of electrically contacted enzyme electrodes. Electroanal 20(6):583–601. doi: 10.​1002/​Elan04128 Zayats M, Willner B, Willner (2008) Design of amperometric biosensors and biofuel cells by the reconstitution of electrically contacted enzyme electrodes. Electroanal 20(6):583–601. doi: 10.​1002/​Elan04128
go back to reference Zhen GL, Falconnet D, Kuennemann E, Voros J, Spencer ND, Textor M Zurcher S (2006) Nitrilotriacetic acid functionalized graft copolymers: a polymeric interface for selective and reversible binding of histidine-tagged proteins. Adv Funct Mater 16(2):243–251. doi: 10.​1002/​Adfm00232 Zhen GL, Falconnet D, Kuennemann E, Voros J, Spencer ND, Textor M Zurcher S (2006) Nitrilotriacetic acid functionalized graft copolymers: a polymeric interface for selective and reversible binding of histidine-tagged proteins. Adv Funct Mater 16(2):243–251. doi: 10.​1002/​Adfm00232
go back to reference Zhou W, Schwartz DT, Baneyx F (2010) Single-Pot biofabrication of zinc sulfide immuno-quantum dots. J Am Chem Soc 132(13):4731–4738. doi: 10.​1021/​ja909406n Zhou W, Schwartz DT, Baneyx F (2010) Single-Pot biofabrication of zinc sulfide immuno-quantum dots. J Am Chem Soc 132(13):4731–4738. doi: 10.​1021/​ja909406n
go back to reference Zimmer M (2002) Green fluorescent protein (GFP): Applications, structure and related photophysical behavior. Chem Rev 102(3):759–781. doi: 10.​1021/​cr010142r Zimmer M (2002) Green fluorescent protein (GFP): Applications, structure and related photophysical behavior. Chem Rev 102(3):759–781. doi: 10.​1021/​cr010142r
go back to reference Zin MT, Munro AM, Gungormus M, Wong NY, Ma H, Tamerler C, Ginger DS, Sarikaya M, Jen AKY (2007) Peptide-mediated surface-immobilized quantum dot hybrid nanoassemblies with controlled photoluminescence. J Mater Chem 17(9):866–872. doi: 10.​1039/​B615010a Zin MT, Munro AM, Gungormus M, Wong NY, Ma H, Tamerler C, Ginger DS, Sarikaya M, Jen AKY (2007) Peptide-mediated surface-immobilized quantum dot hybrid nanoassemblies with controlled photoluminescence. J Mater Chem 17(9):866–872. doi: 10.​1039/​B615010a
Metadata
Title
Addressable Biological Functionalization of Inorganics: Materials-Selective Fusion Proteins in Bio-nanotechnology
Authors
Banu Taktak Karaca
Marketa Hnilova
Candan Tamerler
Copyright Year
2014
Publisher
Springer New York
DOI
https://doi.org/10.1007/978-1-4614-9446-1_8