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2017 | OriginalPaper | Chapter

Mass Spectrometry Analysis Using MALDIquant

Authors : Sebastian Gibb, Korbinian Strimmer

Published in: Statistical Analysis of Proteomics, Metabolomics, and Lipidomics Data Using Mass Spectrometry

Publisher: Springer International Publishing

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Abstract

MALDIquant and associated R packages provide a versatile and completely free open-source platform for analyzing 2D mass spectrometry data as generated, for instance, by MALDI and SELDI instruments. We first describe the various methods and algorithms available in MALDIquant. Subsequently, we illustrate a typical analysis workflow using MALDIquant by investigating an experimental cancer data set, starting from raw mass spectrometry measurements and ending at multivariate classification.

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Title: Mass Spectrometry Analysis Using MALDIquant
Authors: Sebastian Gibb
Korbinian Strimmer
Publisher: Springer International Publishing
Book: Statistical Analysis of Proteomics, Metabolomics, and Lipidomics Data Using Mass Spectrometry
Print ISBN: 978-3-319-45807-6

Electronic ISBN: 978-3-319-45809-0

Copyright Year: 2017
DOI: https://doi.org/10.1007/978-3-319-45809-0_6

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