Skip to main content
Top
Published in: Neural Computing and Applications 10/2019

19-03-2018 | Original Article

Computational diagnosis of skin lesions from dermoscopic images using combined features

Authors: Roberta B. Oliveira, Aledir S. Pereira, João Manuel R. S. Tavares

Published in: Neural Computing and Applications | Issue 10/2019

Log in

Activate our intelligent search to find suitable subject content or patents.

search-config
loading …

Abstract

There has been an alarming increase in the number of skin cancer cases worldwide in recent years, which has raised interest in computational systems for automatic diagnosis to assist early diagnosis and prevention. Feature extraction to describe skin lesions is a challenging research area due to the difficulty in selecting meaningful features. The main objective of this work is to find the best combination of features, based on shape properties, colour variation and texture analysis, to be extracted using various feature extraction methods. Several colour spaces are used for the extraction of both colour- and texture-related features. Different categories of classifiers were adopted to evaluate the proposed feature extraction step, and several feature selection algorithms were compared for the classification of skin lesions. The developed skin lesion computational diagnosis system was applied to a set of 1104 dermoscopic images using a cross-validation procedure. The best results were obtained by an optimum-path forest classifier with very promising results. The proposed system achieved an accuracy of 92.3%, sensitivity of 87.5% and specificity of 97.1% when the full set of features was used. Furthermore, it achieved an accuracy of 91.6%, sensitivity of 87% and specificity of 96.2%, when 50 features were selected using a correlation-based feature selection algorithm.

Dont have a licence yet? Then find out more about our products and how to get one now:

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Literature
1.
go back to reference Scharcanski J, Celebi ME (2013) Computer vision techniques for the diagnosis of skin cancer. Springer, Berlin Scharcanski J, Celebi ME (2013) Computer vision techniques for the diagnosis of skin cancer. Springer, Berlin
13.
go back to reference Materka A, Strzelecki M (1998) Texture analysis methods: a review. COST B11 report. Technical University of Lodz, Brussels Materka A, Strzelecki M (1998) Texture analysis methods: a review. COST B11 report. Technical University of Lodz, Brussels
14.
go back to reference Iyatomi H, Norton K, Celebi ME, Schaefer G, Tanaka M, Ogawa K (2010) Classification of melanocytic skin lesions from non-melanocytic lesions. In: Annual international conference of the IEEE engineering in medicine and biology society buenos aires, Aug 31–Sept 4, 2010. IEEE, pp 5407–5410. https://doi.org/10.1109/iembs.2010.5626500 Iyatomi H, Norton K, Celebi ME, Schaefer G, Tanaka M, Ogawa K (2010) Classification of melanocytic skin lesions from non-melanocytic lesions. In: Annual international conference of the IEEE engineering in medicine and biology society buenos aires, Aug 31–Sept 4, 2010. IEEE, pp 5407–5410. https://​doi.​org/​10.​1109/​iembs.​2010.​5626500
17.
18.
go back to reference Yuan X, Yang Z, Zouridakis G, Mullani N (2006) SVM-based texture classification and application to early melanoma detection. In: 28th annual international conference of the IEEE engineering in medicine and biology society, New York, Aug 30–Sept 3, 2006. IEEE, pp 4775–4778. https://doi.org/10.1109/iembs.2006.260056 Yuan X, Yang Z, Zouridakis G, Mullani N (2006) SVM-based texture classification and application to early melanoma detection. In: 28th annual international conference of the IEEE engineering in medicine and biology society, New York, Aug 30–Sept 3, 2006. IEEE, pp 4775–4778. https://​doi.​org/​10.​1109/​iembs.​2006.​260056
19.
go back to reference Webb AR (2003) Statistical pattern recognition, 2nd edn. Wiley, EnglandMATH Webb AR (2003) Statistical pattern recognition, 2nd edn. Wiley, EnglandMATH
20.
go back to reference Japkowicz N, Shah M (2011) Evaluating learning algorithms: a classification perspective. Cambridge University Press, CambridgeCrossRef Japkowicz N, Shah M (2011) Evaluating learning algorithms: a classification perspective. Cambridge University Press, CambridgeCrossRef
21.
go back to reference Rahman MM, Bhattacharya P, Desai BC (2008) A multiple expert-based melanoma recognition system for dermoscopic images of pigmented skin lesions. In: 8th IEEE international conference on international conference on bioinformatics and bioengineering, Athens, October 8–10, 2008. IEEE, pp 1–6. https://doi.org/10.1109/bibe.2008.4696799 Rahman MM, Bhattacharya P, Desai BC (2008) A multiple expert-based melanoma recognition system for dermoscopic images of pigmented skin lesions. In: 8th IEEE international conference on international conference on bioinformatics and bioengineering, Athens, October 8–10, 2008. IEEE, pp 1–6. https://​doi.​org/​10.​1109/​bibe.​2008.​4696799
26.
go back to reference Costa LdF, Cesar Junior RM (2009) Shape classification and analysis: theory and practice, 2nd edn. CRC Press, Boca RatonCrossRef Costa LdF, Cesar Junior RM (2009) Shape classification and analysis: theory and practice, 2nd edn. CRC Press, Boca RatonCrossRef
27.
go back to reference Clawson KM, Morrow P, Scotney B, McKenna J, Dolan O (2009) Analysis of pigmented skin lesion border irregularity using the harmonic wavelet transform. In: 13th international machine vision and image processing conference Dublin, Sept 2–4, 2009. IEEE, pp 18–23 Clawson KM, Morrow P, Scotney B, McKenna J, Dolan O (2009) Analysis of pigmented skin lesion border irregularity using the harmonic wavelet transform. In: 13th international machine vision and image processing conference Dublin, Sept 2–4, 2009. IEEE, pp 18–23
34.
go back to reference Al-Akaidi M (2004) Fractal speech processing. Cambridge University Press, New YorkCrossRef Al-Akaidi M (2004) Fractal speech processing. Cambridge University Press, New YorkCrossRef
35.
go back to reference Scheunders P, Livens S, Van de Wouwer G, Vautrot P, Van Dyck D (1998) Wavelet-based texture analysis. Int J Comput Sci Inf Manag 1(2):22–34 Scheunders P, Livens S, Van de Wouwer G, Vautrot P, Van Dyck D (1998) Wavelet-based texture analysis. Int J Comput Sci Inf Manag 1(2):22–34
38.
go back to reference Abedini M, Chen Q, Codella NCF, Garnavi R, Sun X (2015) Accurate and scalable system for automatic detection of malignant melanoma. In: Celebi ME, Mendonca T, Marques JS (eds) Dermoscopy image analysis. CRC Press, Boca Raton, pp 293–343. https://doi.org/10.1201/b19107-11 CrossRef Abedini M, Chen Q, Codella NCF, Garnavi R, Sun X (2015) Accurate and scalable system for automatic detection of malignant melanoma. In: Celebi ME, Mendonca T, Marques JS (eds) Dermoscopy image analysis. CRC Press, Boca Raton, pp 293–343. https://​doi.​org/​10.​1201/​b19107-11 CrossRef
39.
go back to reference Witten IH, Frank E, Hall MA (2016) Data mining: practical machine learning tools and techniques, 4th edn. Morgan Kaufmann, San Francisco Witten IH, Frank E, Hall MA (2016) Data mining: practical machine learning tools and techniques, 4th edn. Morgan Kaufmann, San Francisco
41.
go back to reference Guyon I, Elisseeff A (2003) An introduction to variable and feature selection. J Mach Learn Res 3:1157–1182MATH Guyon I, Elisseeff A (2003) An introduction to variable and feature selection. J Mach Learn Res 3:1157–1182MATH
47.
go back to reference Hall MA (2000) Correlation-based feature selection for discrete and numeric class machine learning. In: Proceedings of the 17th international conference on machine learning, San Francisco, June 29–July 02, 2000. Morgan Kaufmann, 657793, pp 359–366 Hall MA (2000) Correlation-based feature selection for discrete and numeric class machine learning. In: Proceedings of the 17th international conference on machine learning, San Francisco, June 29–July 02, 2000. Morgan Kaufmann, 657793, pp 359–366
48.
go back to reference Hand D, Mannila H, Smyth P (2001) Principles of data mining. The MIT Press, London Hand D, Mannila H, Smyth P (2001) Principles of data mining. The MIT Press, London
49.
go back to reference Kohavi R (1995) A study of cross-validation and bootstrap for accuracy estimation and model selection. In: Proceedings of the 14th international joint conference on artificial intelligence, Quebec, Aug 20–25, 1995. Morgan Kaufmann, pp 1137–1145 Kohavi R (1995) A study of cross-validation and bootstrap for accuracy estimation and model selection. In: Proceedings of the 14th international joint conference on artificial intelligence, Quebec, Aug 20–25, 1995. Morgan Kaufmann, pp 1137–1145
50.
go back to reference Congdon P (2007) Bayesian statistical modelling, vol 704, 2nd edn. Wiley, ChichesterMATH Congdon P (2007) Bayesian statistical modelling, vol 704, 2nd edn. Wiley, ChichesterMATH
51.
go back to reference Quinlan JR (1993) C4.5: programs for machine learning. Morgan Kaufmann, San Francisco Quinlan JR (1993) C4.5: programs for machine learning. Morgan Kaufmann, San Francisco
52.
go back to reference Haykin SS (1999) Neural networks: a comprehensive foundation. Prentice Hall, Englewood CliffsMATH Haykin SS (1999) Neural networks: a comprehensive foundation. Prentice Hall, Englewood CliffsMATH
54.
go back to reference Han J, Kamber M (2006) Data mining: concepts and techniques. Elsevier, San FranciscoMATH Han J, Kamber M (2006) Data mining: concepts and techniques. Elsevier, San FranciscoMATH
55.
go back to reference Platt JC (1999) Fast training of support vector machines using sequential minimal optimization. Advances in Kernel methods. MIT Press Cambridge, USA, pp 185–208 Platt JC (1999) Fast training of support vector machines using sequential minimal optimization. Advances in Kernel methods. MIT Press Cambridge, USA, pp 185–208
57.
go back to reference Gutman D, Codella NCF, Celebi E, Helba B, Marchetti M, Mishra N, Halpern AC (2016) Skin lesion analysis toward melanoma detection: a challenge at the international symposium on biomedical imaging (ISBI) 2016, hosted by the International Skin Imaging Collaboration (ISIC), arXiv preprint arXiv:1605.01397 Gutman D, Codella NCF, Celebi E, Helba B, Marchetti M, Mishra N, Halpern AC (2016) Skin lesion analysis toward melanoma detection: a challenge at the international symposium on biomedical imaging (ISBI) 2016, hosted by the International Skin Imaging Collaboration (ISIC), arXiv preprint arXiv:​1605.​01397
60.
go back to reference Zortea M, Schopf TR, Thon K, Geilhufe M, Hindberg K, Kirchesch H, Møllersen K, Schulz J, Skrøvseth SO, Godtliebsen F (2014) Performance of a dermoscopy-based computer vision system for the diagnosis of pigmented skin lesions compared with visual evaluation by experienced dermatologists. Artif Intell Med 60(1):13–26. https://doi.org/10.1016/j.artmed.2013.11.006 CrossRef Zortea M, Schopf TR, Thon K, Geilhufe M, Hindberg K, Kirchesch H, Møllersen K, Schulz J, Skrøvseth SO, Godtliebsen F (2014) Performance of a dermoscopy-based computer vision system for the diagnosis of pigmented skin lesions compared with visual evaluation by experienced dermatologists. Artif Intell Med 60(1):13–26. https://​doi.​org/​10.​1016/​j.​artmed.​2013.​11.​006 CrossRef
63.
go back to reference Toussaint GT (1983) Solving geometric problems with the rotating calipers. In: Proceedings of IEEE Melecon, Athens, 1983, pp 1–8 Toussaint GT (1983) Solving geometric problems with the rotating calipers. In: Proceedings of IEEE Melecon, Athens, 1983, pp 1–8
69.
go back to reference Wang D, He T, Li Z, Cao L, Dey N, Ashour AS, Balas VE, McCauley P, Lin Y, Xu J (2016) Image feature-based affective retrieval employing improved parameter and structure identification of adaptive neuro-fuzzy inference system. Neural Comput Appl. https://doi.org/10.1007/s0052 CrossRef Wang D, He T, Li Z, Cao L, Dey N, Ashour AS, Balas VE, McCauley P, Lin Y, Xu J (2016) Image feature-based affective retrieval employing improved parameter and structure identification of adaptive neuro-fuzzy inference system. Neural Comput Appl. https://​doi.​org/​10.​1007/​s0052 CrossRef
71.
go back to reference Li Z, Shi K, Dey N, Ashour AS, Wang D, Balas VE, McCauley P, Shi F (2017) Rule-based back propagation neural networks for various precision rough set presented KANSEI knowledge prediction: a case study on shoe product form features extraction. Neural Comput Appl 28(3):613–630. https://doi.org/10.1007/s0052 CrossRef Li Z, Shi K, Dey N, Ashour AS, Wang D, Balas VE, McCauley P, Shi F (2017) Rule-based back propagation neural networks for various precision rough set presented KANSEI knowledge prediction: a case study on shoe product form features extraction. Neural Comput Appl 28(3):613–630. https://​doi.​org/​10.​1007/​s0052 CrossRef
74.
go back to reference Kuncheva LI (2014) Combining pattern classifiers: methods and algorithms, 2nd edn. Wiley, New JerseyMATH Kuncheva LI (2014) Combining pattern classifiers: methods and algorithms, 2nd edn. Wiley, New JerseyMATH
Metadata
Title
Computational diagnosis of skin lesions from dermoscopic images using combined features
Authors
Roberta B. Oliveira
Aledir S. Pereira
João Manuel R. S. Tavares
Publication date
19-03-2018
Publisher
Springer London
Published in
Neural Computing and Applications / Issue 10/2019
Print ISSN: 0941-0643
Electronic ISSN: 1433-3058
DOI
https://doi.org/10.1007/s00521-018-3439-8

Other articles of this Issue 10/2019

Neural Computing and Applications 10/2019 Go to the issue

Premium Partner