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Published in: Data Mining and Knowledge Discovery 6/2023

26-07-2023

Interplay between topology and edge weights in real-world graphs: concepts, patterns, and an algorithm

Authors: Fanchen Bu, Shinhwan Kang, Kijung Shin

Published in: Data Mining and Knowledge Discovery | Issue 6/2023

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Abstract

What are the relations between the edge weights and the topology in real-world graphs? Given only the topology of a graph, how can we assign realistic weights to its edges based on the relations? Several trials have been done for edge-weight prediction where some unknown edge weights are predicted with most edge weights known. There are also existing works on generating both topology and edge weights of weighted graphs. Differently, we are interested in generating edge weights that are realistic in a macroscopic scope, merely from the topology, which is unexplored and challenging. To this end, we explore and exploit the patterns involving edge weights and topology in real-world graphs. Specifically, we divide each graph into layers where each layer consists of the edges with weights at least a threshold. We observe consistent and surprising patterns appearing in multiple layers: the similarity between being adjacent and having high weights, and the nearly-linear growth of the fraction of edges having high weights with the number of common neighbors. We also observe a power-law pattern that connects the layers. Based on the observations, we propose PEAR, an algorithm assigning realistic edge weights to a given topology. The algorithm relies on only two parameters, preserves all the observed patterns, and produces more realistic weights than the baseline methods with more parameters.

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Appendix
Available only for authorised users
Footnotes
1
See Appendix E for some illustrative experiments, where we use edge weights generated by our proposed method to enhance the performance of a community detection method.
 
2
Formally, the STC property requires that, for any three nodes u, v, and w, if both of the edges (uv) and (uw) are strong, then the edge (vw) must exist.
 
3
\(G_1\), the layer-1 of G, is identical to the original graph G.
 
4
Note that the fraction of adjacent pairs can be different from the density of the corresponding induced subgraph.
 
5
The point-biserial correlation measures the correlation between a continuous variable and a discrete variable, and it is mathematically equivalent to the Pearson correlation.
 
6
We are studying the correlations here, and the absolute differences are not necessarily small.
 
7
We only include the first four layers of FL since the layer-5 is too sparse and small.
 
8
The \(\vert E_i \vert\)’s (specifically, \(\vert E_1 \vert\), \(\vert E_2 \vert\), \(\vert E_3 \vert\), and \(\vert E_4 \vert\)) are essentially four parameters, compared to only two parameters used in PEAR.
 
9
The CNs are counted in each original graph (i.e., layer-i) instead of in each layer. An optimization problem in (Adriaens et al. 2020) of maximizing the total edge weights of all triangles is equivalent to this method.
 
10
We simply take all the candidates, if \(\vert E_i \vert\) is larger than the number of candidates. We have also tried including all the candidates as the weighty edges, which, however, for each dataset, produced layers that only change slightly after layer-2, and thus cannot produce meaningful edge weights more than binary categorization.
 
11
As a weighted graph evolves, its topology may stay the same, but the edge weights representing the repetitions of edges may change. Such scenarios imply that for a given topology, multiple optimal groups of edge weights exist, and thus it is hard to find the best-performing setting.
 
12
Given a graph, NetSimile uses seven node-level structural features to generate a characteristic vector for the graph after feature aggregation over the nodes. Notably, we do not need to solve the node-correspondence problem for NetSimile and the measure is size-invariant (Berlingerio et al. 2012). NetSimile runs out of memory on sx-SO and the corresponding results are unavailable.
 
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Metadata
Title
Interplay between topology and edge weights in real-world graphs: concepts, patterns, and an algorithm
Authors
Fanchen Bu
Shinhwan Kang
Kijung Shin
Publication date
26-07-2023
Publisher
Springer US
Published in
Data Mining and Knowledge Discovery / Issue 6/2023
Print ISSN: 1384-5810
Electronic ISSN: 1573-756X
DOI
https://doi.org/10.1007/s10618-023-00940-w

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