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2015 | OriginalPaper | Buchkapitel

A Mixed-Effects Model with Time Reparametrization for Longitudinal Univariate Manifold-Valued Data

verfasst von : J.-B. Schiratti, S. Allassonnière, A. Routier, O. Colliot, S. Durrleman, the Alzheimers Disease Neuroimaging Initiative

Erschienen in: Information Processing in Medical Imaging

Verlag: Springer International Publishing

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Abstract

Mixed-effects models provide a rich theoretical framework for the analysis of longitudinal data. However, when used to analyze or predict the progression of a neurodegenerative disease such as Alzheimer’s disease, these models usually do not take into account the fact that subjects may be at different stages of disease progression and the interpretation of the model may depend on some implicit reference time. In this paper, we propose a generative statistical model for longitudinal data, described in a univariate Riemannian manifold setting, which estimates an average disease progression model, subject-specific time shifts and acceleration factors. The time shifts account for variability in age at disease-onset time. The acceleration factors account for variability in speed of disease progression. For a given individual, the estimated time shift and acceleration factor define an affine reparametrization of the average disease progression model. This statistical model has been used to analyze neuropsychological assessments scores and cortical thickness measurements from the Alzheimer’s Disease Neuroimaging Initiative database. The numerical results showed that we can distinguish between slow versus fast progressing and early versus late-onset individuals.

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Literatur
1.
Zurück zum Zitat Jack Jr., C.R., Knopman, D.S., Jagust, W.J., Shaw, L.M., Aisen, P.S., Weiner, M.W.: Hypothetical model of dynamic biomarkers of the Alzheimer’s pathological cascade. Lancet Neurol. 9(1), 119–128 (2010)CrossRef Jack Jr., C.R., Knopman, D.S., Jagust, W.J., Shaw, L.M., Aisen, P.S., Weiner, M.W.: Hypothetical model of dynamic biomarkers of the Alzheimer’s pathological cascade. Lancet Neurol. 9(1), 119–128 (2010)CrossRef
2.
Zurück zum Zitat Samtani, M.N., Raghavan, N., Shi, Y., Novak, G., Farnum, M., Lobanov, V.: Disease progression model in subjects with mild cognitive impairment from the Alzheimer’s disease neuroimaging initiative: CSF biomarkers predict population subtypes. Brit. J. Clin. Pharmacol. 75(1), 146–161 (2013)CrossRef Samtani, M.N., Raghavan, N., Shi, Y., Novak, G., Farnum, M., Lobanov, V.: Disease progression model in subjects with mild cognitive impairment from the Alzheimer’s disease neuroimaging initiative: CSF biomarkers predict population subtypes. Brit. J. Clin. Pharmacol. 75(1), 146–161 (2013)CrossRef
3.
Zurück zum Zitat Delor, I., Charoin, J.E., Gieschke, R., Retout, S., Jacqmin, P.: Modeling Alzheimers disease progression using disease onset time and disease trajectory concepts applied to cdr-sob scores from ADNI. CPT Pharmacometrics Syst. Pharmacol. 2(10), e78 (2013)CrossRef Delor, I., Charoin, J.E., Gieschke, R., Retout, S., Jacqmin, P.: Modeling Alzheimers disease progression using disease onset time and disease trajectory concepts applied to cdr-sob scores from ADNI. CPT Pharmacometrics Syst. Pharmacol. 2(10), e78 (2013)CrossRef
4.
Zurück zum Zitat Yang, E., Farnum, M., Lobanov, V., Schultz, T., Raghavan, N., Samtani, M.N.: Quantifying the pathophysiological timeline of Alzheimer’s disease. J. Alzheimer’s Dis. 26(4), 745–753 (2011) Yang, E., Farnum, M., Lobanov, V., Schultz, T., Raghavan, N., Samtani, M.N.: Quantifying the pathophysiological timeline of Alzheimer’s disease. J. Alzheimer’s Dis. 26(4), 745–753 (2011)
5.
Zurück zum Zitat Laird, N.M., Ware, J.H.: Random-effects models for longitudinal data. Biometrics 38, 963–974 (1982)MATHCrossRef Laird, N.M., Ware, J.H.: Random-effects models for longitudinal data. Biometrics 38, 963–974 (1982)MATHCrossRef
6.
Zurück zum Zitat DoCarmo, M.P.: Riemannian Geometry. Springer, Hiedelberg (1992) DoCarmo, M.P.: Riemannian Geometry. Springer, Hiedelberg (1992)
7.
Zurück zum Zitat Datar, M., Muralidharan, P., Kumar, A., Gouttard, S., Piven, J., Gerig, G., Whitaker, R., Fletcher, P.T.: Mixed-effects shape models for estimating longitudinal changes in anatomy. In: Durrleman, S., Fletcher, T., Gerig, G., Niethammer, M. (eds.) STIA 2012. LNCS, vol. 7570, pp. 76–87. Springer, Heidelberg (2012) CrossRef Datar, M., Muralidharan, P., Kumar, A., Gouttard, S., Piven, J., Gerig, G., Whitaker, R., Fletcher, P.T.: Mixed-effects shape models for estimating longitudinal changes in anatomy. In: Durrleman, S., Fletcher, T., Gerig, G., Niethammer, M. (eds.) STIA 2012. LNCS, vol. 7570, pp. 76–87. Springer, Heidelberg (2012) CrossRef
8.
Zurück zum Zitat Singh, N., Hinkle, J., Joshi, S., Fletcher, P.T.: A hierarchical geodesic model for diffeomorphic longitudinal shape analysis. In: Gee, J.C., Joshi, S., Pohl, K.M., Wells, W.M., Zöllei, L. (eds.) IPMI 2013. LNCS, vol. 7917, pp. 560–571. Springer, Heidelberg (2013) CrossRef Singh, N., Hinkle, J., Joshi, S., Fletcher, P.T.: A hierarchical geodesic model for diffeomorphic longitudinal shape analysis. In: Gee, J.C., Joshi, S., Pohl, K.M., Wells, W.M., Zöllei, L. (eds.) IPMI 2013. LNCS, vol. 7917, pp. 560–571. Springer, Heidelberg (2013) CrossRef
9.
Zurück zum Zitat Lorenzi, M., Pennec, X., Frisoni, G.B., Ayache, N.: Alzheimer’s disease neuroimaging initiative: disentangling normal aging from alzheimer’s disease in structural magnetic resonance images. Neurobiol Aging 31(8), 1443–1451 (2015)CrossRef Lorenzi, M., Pennec, X., Frisoni, G.B., Ayache, N.: Alzheimer’s disease neuroimaging initiative: disentangling normal aging from alzheimer’s disease in structural magnetic resonance images. Neurobiol Aging 31(8), 1443–1451 (2015)CrossRef
10.
Zurück zum Zitat Durrleman, S., Pennec, X., Trouvé, A., Braga, J., Gerig, G., Ayache, N.: Toward a comprehensive framework for the spatiotemporal statistical analysis of longitudinal shape data. IJCV 103(1), 22–59 (2013)MATHCrossRef Durrleman, S., Pennec, X., Trouvé, A., Braga, J., Gerig, G., Ayache, N.: Toward a comprehensive framework for the spatiotemporal statistical analysis of longitudinal shape data. IJCV 103(1), 22–59 (2013)MATHCrossRef
11.
Zurück zum Zitat Durrleman, S., Pennec, X., Trouvé, A., Gerig, G., Ayache, N.: Spatiotemporal atlas estimation for developmental delay detection in longitudinal datasets. In: Yang, G.Z., Hawkes, D., Rueckert, D., Noble, A., Taylor, C. (eds.) MICCAI 2009. LNCS, pp. 297–304. Springer, Heidelberg (2009) CrossRef Durrleman, S., Pennec, X., Trouvé, A., Gerig, G., Ayache, N.: Spatiotemporal atlas estimation for developmental delay detection in longitudinal datasets. In: Yang, G.Z., Hawkes, D., Rueckert, D., Noble, A., Taylor, C. (eds.) MICCAI 2009. LNCS, pp. 297–304. Springer, Heidelberg (2009) CrossRef
12.
13.
Zurück zum Zitat Lindstrom, M.J., Bates, D.M.: Nonlinear mixed effects models for repeated measures data. Biometrics 46, 673–687 (1990)MathSciNetCrossRef Lindstrom, M.J., Bates, D.M.: Nonlinear mixed effects models for repeated measures data. Biometrics 46, 673–687 (1990)MathSciNetCrossRef
14.
Zurück zum Zitat Fonteijn, H.M., Modat, M., Clarkson, M.J., Barnes, J., Lehmann, M., Hobbs, N.Z., Alexander, D.C.: An event-based model for disease progression and its application in familial Alzheimer’s disease and Huntington’s disease. NeuroImage 60(3), 1880–1889 (2012)CrossRef Fonteijn, H.M., Modat, M., Clarkson, M.J., Barnes, J., Lehmann, M., Hobbs, N.Z., Alexander, D.C.: An event-based model for disease progression and its application in familial Alzheimer’s disease and Huntington’s disease. NeuroImage 60(3), 1880–1889 (2012)CrossRef
16.
Zurück zum Zitat Braak, H., Braak, E.: Staging of Alzheimer’s disease-related neurofibrillary changes. Neurobiol Aging 16(3), 271–278 (1995)CrossRef Braak, H., Braak, E.: Staging of Alzheimer’s disease-related neurofibrillary changes. Neurobiol Aging 16(3), 271–278 (1995)CrossRef
17.
Zurück zum Zitat Delacourte, A., David, J.P., Sergeant, N., Buee, L., Wattez, A., Vermersch, P., Di Menza, C.: The biochemical pathway of neurofibrillary degeneration in aging and Alzheimer’s disease. Neurology 52(6), 1158–1165 (1999)CrossRef Delacourte, A., David, J.P., Sergeant, N., Buee, L., Wattez, A., Vermersch, P., Di Menza, C.: The biochemical pathway of neurofibrillary degeneration in aging and Alzheimer’s disease. Neurology 52(6), 1158–1165 (1999)CrossRef
18.
Zurück zum Zitat Benzinger, T.L., Blazey, T., Jack, C.R., Koeppe, R.A., Su, Y., Xiong, C., Morris, J.C.: Regional variability of imaging biomarkers in autosomal dominant Alzheimer’s disease. Proc. Natl. Acad. Sci. USA 110(47), 18982–18987 (2013)CrossRef Benzinger, T.L., Blazey, T., Jack, C.R., Koeppe, R.A., Su, Y., Xiong, C., Morris, J.C.: Regional variability of imaging biomarkers in autosomal dominant Alzheimer’s disease. Proc. Natl. Acad. Sci. USA 110(47), 18982–18987 (2013)CrossRef
19.
Zurück zum Zitat Desikan, R.S., Ségonne, F., Fischl, B., Quinn, B.T., Dickerson, B.C., Blacker, D., Killiany, R.J.: An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest. Neuroimage 31(3), 968–980 (2006)CrossRef Desikan, R.S., Ségonne, F., Fischl, B., Quinn, B.T., Dickerson, B.C., Blacker, D., Killiany, R.J.: An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest. Neuroimage 31(3), 968–980 (2006)CrossRef
Metadaten
Titel
A Mixed-Effects Model with Time Reparametrization for Longitudinal Univariate Manifold-Valued Data
verfasst von
J.-B. Schiratti
S. Allassonnière
A. Routier
O. Colliot
S. Durrleman
the Alzheimers Disease Neuroimaging Initiative
Copyright-Jahr
2015
DOI
https://doi.org/10.1007/978-3-319-19992-4_44