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2017 | OriginalPaper | Buchkapitel

A Semantically-Enabled System for Inflammatory Bowel Diseases

verfasst von : Lei Xu, Zhisheng Huang, Hao Fan, Siwei Yu

Erschienen in: Health Information Science

Verlag: Springer International Publishing

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Abstract

The incidence rate of Inflammatory Bowel Disease (IBD) in China is increasing in recent years and the cause of this disease is still not clear. In order to promote the development of this study, in this paper, we propose a Semantically-enabled System for Inflammatory Bowel Diseases (SeSIBD). It provides functions of semantic retrieval over patient data, statistical analysis and literature retrieval based on patient characteristics. SeSIBID is built on the top of LarKC, a semantic platform for scalable semantic data processing and reasoning. Although the current implementation of SeSIBID is a prototype system, it will provide an infrastructure for clinical decision making support for deep excavation and knowledge discovery on various of medical resources of IBD in the future.

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Literatur
1.
Zurück zum Zitat Al-Ghamdi, A.S., Al-Mofleh, I.A., Al-Rashed, R.S., Al-Amri, S.M., Aljebreen, A.M., Isnani, A.C., El-Badawi, R.: Epidemiology and outcome of crohn’s disease in a teaching hospital in Riyadh. World J. Gastroenterol. 10(9), 1341–1344 (2004) Al-Ghamdi, A.S., Al-Mofleh, I.A., Al-Rashed, R.S., Al-Amri, S.M., Aljebreen, A.M., Isnani, A.C., El-Badawi, R.: Epidemiology and outcome of crohn’s disease in a teaching hospital in Riyadh. World J. Gastroenterol. 10(9), 1341–1344 (2004)
2.
Zurück zum Zitat Chinese IBD APDW2004: Retrospective analysis of 515 cases of crohns disease hospitalization in China: nationwide study from 1990 to 2003. J. Gastroenterol. Hepatol. 21, 1009–1015 (2006) Chinese IBD APDW2004: Retrospective analysis of 515 cases of crohns disease hospitalization in China: nationwide study from 1990 to 2003. J. Gastroenterol. Hepatol. 21, 1009–1015 (2006)
3.
4.
Zurück zum Zitat Berners-Lee, T., Hendler, J., Lassila, O.: The semantic web. Sci. Am. Mag. 284, 34–43 (2001)CrossRef Berners-Lee, T., Hendler, J., Lassila, O.: The semantic web. Sci. Am. Mag. 284, 34–43 (2001)CrossRef
5.
Zurück zum Zitat Chow, D.K., Leong, R.W., Lai, L.H., Wong, G.L., Leung, W.-K., Chan, F.K., Sung, J.J.: Changes in crohn’s disease phenotype over time in the chinese population: validation of the montreal classification system. Inflammatory Bowel Dis. 14(4), 536–541 (2008)CrossRef Chow, D.K., Leong, R.W., Lai, L.H., Wong, G.L., Leung, W.-K., Chan, F.K., Sung, J.J.: Changes in crohn’s disease phenotype over time in the chinese population: validation of the montreal classification system. Inflammatory Bowel Dis. 14(4), 536–541 (2008)CrossRef
6.
Zurück zum Zitat Chow, D.K., Leong, R.W., Tsoi, K.K., Ng, S.S., Leung, W.-K., Wu, J.C., Wong, V.W., Chan, F.K., Sung, J.J.: Long-term follow-up of ulcerative colitis in the Chinese population. Am. J. Gastroenterol. 104(3), 647–654 (2009)CrossRef Chow, D.K., Leong, R.W., Tsoi, K.K., Ng, S.S., Leung, W.-K., Wu, J.C., Wong, V.W., Chan, F.K., Sung, J.J.: Long-term follow-up of ulcerative colitis in the Chinese population. Am. J. Gastroenterol. 104(3), 647–654 (2009)CrossRef
7.
Zurück zum Zitat Feigenbaum, L.: The semantic web in action. Sci. Am. 297, 90–97 (2007)CrossRef Feigenbaum, L.: The semantic web in action. Sci. Am. 297, 90–97 (2007)CrossRef
8.
Zurück zum Zitat Fensel, D., van Harmelen, F., Andersson, B., Brennan, P., Cunningham, H., Della Valle, E., Fischer, F., Huang, Z., Kiryakov, A., Lee, T., School, L., Tresp, V., Wesner, S., Witbrock, M., Zhong, N.: Towards LarKC: a platform for web-scale reasoning. In: Proceedings of the IEEE International Conference on Semantic Computing (ICSC 2008). IEEE Computer Society Press, CA, USA (2008) Fensel, D., van Harmelen, F., Andersson, B., Brennan, P., Cunningham, H., Della Valle, E., Fischer, F., Huang, Z., Kiryakov, A., Lee, T., School, L., Tresp, V., Wesner, S., Witbrock, M., Zhong, N.: Towards LarKC: a platform for web-scale reasoning. In: Proceedings of the IEEE International Conference on Semantic Computing (ICSC 2008). IEEE Computer Society Press, CA, USA (2008)
9.
Zurück zum Zitat Hua, X., Chen, C., Huang, Z., Hu, Q., Gu, J., Yu, S., Chen, D.: Intelligent monitoring on use of antibacterial agents based on semantic technology. China Digital Med. 4:006 (2013) Hua, X., Chen, C., Huang, Z., Hu, Q., Gu, J., Yu, S., Chen, D.: Intelligent monitoring on use of antibacterial agents based on semantic technology. China Digital Med. 4:006 (2013)
10.
Zurück zum Zitat Kennelly, R.P., Subramaniam, T., Egan, L.J., Joyce, M., et al.: Smoking and crohn’s disease: active modification of an independent risk factor (education alone is not enough). J. Crohn’s Colitis 7(8), 631–35 (2013)CrossRef Kennelly, R.P., Subramaniam, T., Egan, L.J., Joyce, M., et al.: Smoking and crohn’s disease: active modification of an independent risk factor (education alone is not enough). J. Crohn’s Colitis 7(8), 631–35 (2013)CrossRef
11.
Zurück zum Zitat Li, Y., Wan, Z., Huang, J., Chen, J., Huang, Z., Zhong, N.: A smart hospital information system for mental disorders. In: 2015 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology (WI-IAT), vol. 1, pp. 321–324. IEEE (2015) Li, Y., Wan, Z., Huang, J., Chen, J., Huang, Z., Zhong, N.: A smart hospital information system for mental disorders. In: 2015 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology (WI-IAT), vol. 1, pp. 321–324. IEEE (2015)
12.
Zurück zum Zitat Loftus, C.G., Loftus, E.V., Harmsen, W.S., Zinsmeister, A.R., Tremaine, W.J., Melton, L.J., Sandborn, W.J.: Update on the incidence and prevalence of crohn’s disease and ulcerative colitis in olmsted county, minnesota, 1940–2000. Inflammatory Bowel Dis. 13(3), 254–261 (2007)CrossRef Loftus, C.G., Loftus, E.V., Harmsen, W.S., Zinsmeister, A.R., Tremaine, W.J., Melton, L.J., Sandborn, W.J.: Update on the incidence and prevalence of crohn’s disease and ulcerative colitis in olmsted county, minnesota, 1940–2000. Inflammatory Bowel Dis. 13(3), 254–261 (2007)CrossRef
13.
Zurück zum Zitat Min, L.: The changing profiles of inflammatory bowel disease in china-a 15 year review of IBD cases to a large hospital in eastern China. Technical report (2011) Min, L.: The changing profiles of inflammatory bowel disease in china-a 15 year review of IBD cases to a large hospital in eastern China. Technical report (2011)
14.
Zurück zum Zitat Oriuchi, T., Hiwatashi, N., Kinouchi, Y., Takahashi, S., Takagi, S., Negoro, K., Shimosegawa, T.: Clinical course and longterm prognosis of Japanese patients with crohns disease: predictive factors, rates of operation, and mortality. J. Gastroenterol. 38(10), 942–953 (2003)CrossRef Oriuchi, T., Hiwatashi, N., Kinouchi, Y., Takahashi, S., Takagi, S., Negoro, K., Shimosegawa, T.: Clinical course and longterm prognosis of Japanese patients with crohns disease: predictive factors, rates of operation, and mortality. J. Gastroenterol. 38(10), 942–953 (2003)CrossRef
15.
Zurück zum Zitat Ouyang, Q., Wang, Y., Hu, R.: Epidemiology of inflammatory bowel disease in China. Chinese J. Digestion 28(12), 814–818 (2008) Ouyang, Q., Wang, Y., Hu, R.: Epidemiology of inflammatory bowel disease in China. Chinese J. Digestion 28(12), 814–818 (2008)
16.
Zurück zum Zitat Patel, C., Gomadam, K., Khan, S., Garg, V.: Trialx: using semantic technologies to match patients to relevant clinical trials based on their personal health records. J. Web Sem. 8(4), 342–347 (2010)CrossRef Patel, C., Gomadam, K., Khan, S., Garg, V.: Trialx: using semantic technologies to match patients to relevant clinical trials based on their personal health records. J. Web Sem. 8(4), 342–347 (2010)CrossRef
17.
Zurück zum Zitat Sernadela, P., González-Castro, L., Oliveira, J.L.: Scaleus: semantic web services integration for biomedical applications. J. Med. Syst. 41(4), 54 (2017)CrossRef Sernadela, P., González-Castro, L., Oliveira, J.L.: Scaleus: semantic web services integration for biomedical applications. J. Med. Syst. 41(4), 54 (2017)CrossRef
18.
Zurück zum Zitat Shadbolt, N., Hall, W., Berners-Lee, T.: The semantic web revisited. IEEE Intell. Syst. 21, 96–101 (2006)CrossRef Shadbolt, N., Hall, W., Berners-Lee, T.: The semantic web revisited. IEEE Intell. Syst. 21, 96–101 (2006)CrossRef
19.
Zurück zum Zitat Shanwen, C., Pengyuan, W. Yunchun, L., et al.: Research progress on risk factors associated with postoperative recurrence in patients with Crohn’s disease after bowel resection (1), 89–92 (2015) Shanwen, C., Pengyuan, W. Yunchun, L., et al.: Research progress on risk factors associated with postoperative recurrence in patients with Crohn’s disease after bowel resection (1), 89–92 (2015)
20.
Zurück zum Zitat X. Shi, J. Zheng, Z. Guo, F. Chen, and Z. Wang. Correlated pathogenetic factors of crohn’s disease: a case-control study 13(5), 293–296 (2008) X. Shi, J. Zheng, Z. Guo, F. Chen, and Z. Wang. Correlated pathogenetic factors of crohn’s disease: a case-control study 13(5), 293–296 (2008)
21.
Zurück zum Zitat Solovieva, E., Fujita, N., Shikanai, T., Aoki-Kinoshita, K.F., Narimatsu, H.: PAConto: RDF representation of PACDB data and ontology of infectious diseases known to be related to glycan binding. In: Aoki-Kinoshita, K.F. (ed.) A Practical Guide to Using Glycomics Databases, pp. 261–295. Springer, Tokyo (2017). doi:10.1007/978-4-431-56454-6_14 CrossRef Solovieva, E., Fujita, N., Shikanai, T., Aoki-Kinoshita, K.F., Narimatsu, H.: PAConto: RDF representation of PACDB data and ontology of infectious diseases known to be related to glycan binding. In: Aoki-Kinoshita, K.F. (ed.) A Practical Guide to Using Glycomics Databases, pp. 261–295. Springer, Tokyo (2017). doi:10.​1007/​978-4-431-56454-6_​14 CrossRef
22.
Zurück zum Zitat Thia, K.T., Loftus, E.V., Sandborn, W.J., Yang, S.-K.: An update on the epidemiology of inflammatory bowel disease in Asia. Am. J. Gastroenterol. 103(12), 3167–3182 (2008)CrossRef Thia, K.T., Loftus, E.V., Sandborn, W.J., Yang, S.-K.: An update on the epidemiology of inflammatory bowel disease in Asia. Am. J. Gastroenterol. 103(12), 3167–3182 (2008)CrossRef
23.
Zurück zum Zitat Witbrock, M., Fortuna, B., Bradesko, L., Kerrigan, M., Bishop, B., van Harmelen, F., ten Teije, A., Oren, E., Momtchev, V., Tenschert, A., Cheptsov, A., Roller, S., Gallizo, G.: D5.3.1 - requirements analysis and report on lessons learned during prototyping. Larkc project deliverable, June 2009 Witbrock, M., Fortuna, B., Bradesko, L., Kerrigan, M., Bishop, B., van Harmelen, F., ten Teije, A., Oren, E., Momtchev, V., Tenschert, A., Cheptsov, A., Roller, S., Gallizo, G.: D5.3.1 - requirements analysis and report on lessons learned during prototyping. Larkc project deliverable, June 2009
24.
Zurück zum Zitat Yang, G., Guo, B., Lu, W., et al.: Document analysis on the misdiagnosis of Crohns disease. Chin. J. Misdiagn. 7(21), 5015–5026 (2007) Yang, G., Guo, B., Lu, W., et al.: Document analysis on the misdiagnosis of Crohns disease. Chin. J. Misdiagn. 7(21), 5015–5026 (2007)
25.
Zurück zum Zitat Ying, Z.: Case analysis of Crohn’s disease in the first classified 3A hospital in Jilin. (1), 89–92 (2016) Ying, Z.: Case analysis of Crohn’s disease in the first classified 3A hospital in Jilin. (1), 89–92 (2016)
26.
Zurück zum Zitat Zheng, J.J., Zhu, X.S., Huangfu, Z., Shi, X.H., Guo, Z.R.: Prevalence and incidence rates of crohn’s disease in mainland China: a meta-analysis of 55 years of research. J. Dig. Dis. 11(3), 161–166 (2010)CrossRef Zheng, J.J., Zhu, X.S., Huangfu, Z., Shi, X.H., Guo, Z.R.: Prevalence and incidence rates of crohn’s disease in mainland China: a meta-analysis of 55 years of research. J. Dig. Dis. 11(3), 161–166 (2010)CrossRef
Metadaten
Titel
A Semantically-Enabled System for Inflammatory Bowel Diseases
verfasst von
Lei Xu
Zhisheng Huang
Hao Fan
Siwei Yu
Copyright-Jahr
2017
DOI
https://doi.org/10.1007/978-3-319-69182-4_8