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2017 | Supplement | Buchkapitel

Full Quantification of Left Ventricle via Deep Multitask Learning Network Respecting Intra- and Inter-Task Relatedness

verfasst von : Wufeng Xue, Andrea Lum, Ashley Mercado, Mark Landis, James Warrington, Shuo Li

Erschienen in: Medical Image Computing and Computer Assisted Intervention − MICCAI 2017

Verlag: Springer International Publishing

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Abstract

Cardiac left ventricle (LV) quantification is among the most clinically important tasks for identification and diagnosis of cardiac diseases, yet still a challenge due to the high variability of cardiac structure and the complexity of temporal dynamics. Full quantification, i.e., to simultaneously quantify all LV indices including two areas (cavity and myocardium), six regional wall thicknesses (RWT), three LV dimensions, and one cardiac phase, is even more challenging since the uncertain relatedness intra and inter each type of indices may hinder the learning procedure from better convergence and generalization. In this paper, we propose a newly-designed multitask learning network (FullLVNet), which is constituted by a deep convolution neural network (CNN) for expressive feature embedding of cardiac structure; two followed parallel recurrent neural network (RNN) modules for temporal dynamic modeling; and four linear models for the final estimation. During the final estimation, both intra- and inter-task relatedness are modeled to enforce improvement of generalization: (1) respecting intra-task relatedness, group lasso is applied to each of the regression tasks for sparse and common feature selection and consistent prediction; (2) respecting inter-task relatedness, three phase-guided constraints are proposed to penalize violation of the temporal behavior of the obtained LV indices. Experiments on MR sequences of 145 subjects show that FullLVNet achieves high accurate prediction with our intra- and inter-task relatedness, leading to MAE of 190 mm\(^2\), 1.41 mm, 2.68 mm for average areas, RWT, dimensions and error rate of 10.4% for the phase classification. This endows our method a great potential in comprehensive clinical assessment of global, regional and dynamic cardiac function.

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Literatur
1.
Zurück zum Zitat Afshin, M., Ayed, I.B., Islam, A., Goela, A., Peters, T.M., Li, S.: Global assessment of cardiac function using image statistics in MRI. In: Ayache, N., Delingette, H., Golland, P., Mori, K. (eds.) MICCAI 2012. LNCS, vol. 7511, pp. 535–543. Springer, Heidelberg (2012). doi:10.1007/978-3-642-33418-4_66 CrossRef Afshin, M., Ayed, I.B., Islam, A., Goela, A., Peters, T.M., Li, S.: Global assessment of cardiac function using image statistics in MRI. In: Ayache, N., Delingette, H., Golland, P., Mori, K. (eds.) MICCAI 2012. LNCS, vol. 7511, pp. 535–543. Springer, Heidelberg (2012). doi:10.​1007/​978-3-642-33418-4_​66 CrossRef
2.
Zurück zum Zitat Afshin, M., Ben Ayed, I., Punithakumar, K., Law, M., Islam, A., Goela, A., Peters, T.M., Li, S.: Regional assessment of cardiac left ventricular myocardial function via MRI statistical features. IEEE TMI 33(2), 481–494 (2014) Afshin, M., Ben Ayed, I., Punithakumar, K., Law, M., Islam, A., Goela, A., Peters, T.M., Li, S.: Regional assessment of cardiac left ventricular myocardial function via MRI statistical features. IEEE TMI 33(2), 481–494 (2014)
3.
Zurück zum Zitat Attili, A.K., Schuster, A., Nagel, E., Reiber, J.H., van der Geest, R.J.: Quantification in cardiac MRI: advances in image acquisition and processing. Int. J. Cardiovasc. Imaging 26(1), 27–40 (2010)CrossRef Attili, A.K., Schuster, A., Nagel, E., Reiber, J.H., van der Geest, R.J.: Quantification in cardiac MRI: advances in image acquisition and processing. Int. J. Cardiovasc. Imaging 26(1), 27–40 (2010)CrossRef
4.
Zurück zum Zitat Ayed, I.B., Chen, H.M., Punithakumar, K., Ross, I., Li, S.: Max-flow segmentation of the left ventricle by recovering subject-specific distributions via a bound of the Bhattacharyya measure. Med. Image Anal. 16(1), 87–100 (2012)CrossRef Ayed, I.B., Chen, H.M., Punithakumar, K., Ross, I., Li, S.: Max-flow segmentation of the left ventricle by recovering subject-specific distributions via a bound of the Bhattacharyya measure. Med. Image Anal. 16(1), 87–100 (2012)CrossRef
5.
Zurück zum Zitat Graves, A.: Supervised sequence labelling. Supervised Sequence Labelling with Recurrent Neural Networks. SCI, vol. 385, pp. 5–13. Springer, Heidelberg (2012)CrossRefMATH Graves, A.: Supervised sequence labelling. Supervised Sequence Labelling with Recurrent Neural Networks. SCI, vol. 385, pp. 5–13. Springer, Heidelberg (2012)CrossRefMATH
6.
Zurück zum Zitat Karamitsos, T.D., Francis, J.M., Myerson, S., Selvanayagam, J.B., Neubauer, S.: The role of cardiovascular magnetic resonance imaging in heart failure. J. Am. Coll. Cardiol. 54(15), 1407–1424 (2009)CrossRef Karamitsos, T.D., Francis, J.M., Myerson, S., Selvanayagam, J.B., Neubauer, S.: The role of cardiovascular magnetic resonance imaging in heart failure. J. Am. Coll. Cardiol. 54(15), 1407–1424 (2009)CrossRef
7.
Zurück zum Zitat Kawel-Boehm, N., Maceira, A., Valsangiacomo-Buechel, E.R., Vogel-Claussen, J., Turkbey, E.B., Williams, R., Plein, S., Tee, M., Eng, J., Bluemke, D.A.: Normal values for cardiovascular magnetic resonance in adults and children. J. Cardiovasc. Magn. Reson. 17(1), 29 (2015)CrossRef Kawel-Boehm, N., Maceira, A., Valsangiacomo-Buechel, E.R., Vogel-Claussen, J., Turkbey, E.B., Williams, R., Plein, S., Tee, M., Eng, J., Bluemke, D.A.: Normal values for cardiovascular magnetic resonance in adults and children. J. Cardiovasc. Magn. Reson. 17(1), 29 (2015)CrossRef
8.
Zurück zum Zitat Kong, B., Zhan, Y., Shin, M., Denny, T., Zhang, S.: Recognizing end-diastole and end-systole frames via deep temporal regression network. In: Ourselin, S., Joskowicz, L., Sabuncu, M.R., Unal, G., Wells, W. (eds.) MICCAI 2016. LNCS, vol. 9902, pp. 264–272. Springer, Cham (2016). doi:10.1007/978-3-319-46726-9_31 CrossRef Kong, B., Zhan, Y., Shin, M., Denny, T., Zhang, S.: Recognizing end-diastole and end-systole frames via deep temporal regression network. In: Ourselin, S., Joskowicz, L., Sabuncu, M.R., Unal, G., Wells, W. (eds.) MICCAI 2016. LNCS, vol. 9902, pp. 264–272. Springer, Cham (2016). doi:10.​1007/​978-3-319-46726-9_​31 CrossRef
9.
Zurück zum Zitat Peng, P., Lekadir, K., Gooya, A., Shao, L., Petersen, S.E., Frangi, A.F.: A review of heart chamber segmentation for structural and functional analysis using cardiac magnetic resonance imaging. Magn. Reson. Mater. Phys., Biol. Med. 29(2), 155–195 (2016)CrossRef Peng, P., Lekadir, K., Gooya, A., Shao, L., Petersen, S.E., Frangi, A.F.: A review of heart chamber segmentation for structural and functional analysis using cardiac magnetic resonance imaging. Magn. Reson. Mater. Phys., Biol. Med. 29(2), 155–195 (2016)CrossRef
10.
Zurück zum Zitat Petitjean, C., Dacher, J.N.: A review of segmentation methods in short axis cardiac MR images. Med. Image Anal. 15(2), 169–184 (2011)CrossRef Petitjean, C., Dacher, J.N.: A review of segmentation methods in short axis cardiac MR images. Med. Image Anal. 15(2), 169–184 (2011)CrossRef
11.
Zurück zum Zitat Poudel, R.P., Lamata, P., Montana, G.: Recurrent fully convolutional neural networks for multi-slice MRI cardiac segmentation arXiv:1608.03974 (2016) Poudel, R.P., Lamata, P., Montana, G.: Recurrent fully convolutional neural networks for multi-slice MRI cardiac segmentation arXiv:​1608.​03974 (2016)
12.
Zurück zum Zitat Shin, H.C., Roth, H.R., Gao, M., Lu, L., Xu, Z., Nogues, I., Yao, J., Mollura, D., Summers, R.M.: Deep convolutional neural networks for computer-aided detection: CNN architectures, dataset characteristics and transfer learning. IEEE TMI 35(5), 1285–1298 (2016) Shin, H.C., Roth, H.R., Gao, M., Lu, L., Xu, Z., Nogues, I., Yao, J., Mollura, D., Summers, R.M.: Deep convolutional neural networks for computer-aided detection: CNN architectures, dataset characteristics and transfer learning. IEEE TMI 35(5), 1285–1298 (2016)
13.
Zurück zum Zitat Suinesiaputra, A., Bluemke, D.A., Cowan, B.R., Friedrich, M.G., Kramer, C.M., Kwong, R., Plein, S., Schulz-Menger, J., Westenberg, J.J., Young, A.A., et al.: Quantification of LV function and mass by cardiovascular magnetic resonance: multi-center variability and consensus contours. J. Cardiovasc. Magn. Reson. 17(1), 63 (2015)CrossRef Suinesiaputra, A., Bluemke, D.A., Cowan, B.R., Friedrich, M.G., Kramer, C.M., Kwong, R., Plein, S., Schulz-Menger, J., Westenberg, J.J., Young, A.A., et al.: Quantification of LV function and mass by cardiovascular magnetic resonance: multi-center variability and consensus contours. J. Cardiovasc. Magn. Reson. 17(1), 63 (2015)CrossRef
14.
Zurück zum Zitat Wang, Z., Ben Salah, M., Gu, B., Islam, A., Goela, A., Li, S.: Direct estimation of cardiac biventricular volumes with an adapted bayesian formulation. IEEE TBE 61(4), 1251–1260 (2014) Wang, Z., Ben Salah, M., Gu, B., Islam, A., Goela, A., Li, S.: Direct estimation of cardiac biventricular volumes with an adapted bayesian formulation. IEEE TBE 61(4), 1251–1260 (2014)
15.
Zurück zum Zitat Zhang, Y., Yeung, D.Y.: A convex formulation for learning task relationships in multi-task learning. In: UAI, pp. 733–742 (2010) Zhang, Y., Yeung, D.Y.: A convex formulation for learning task relationships in multi-task learning. In: UAI, pp. 733–742 (2010)
16.
Zurück zum Zitat Zhang, Z., Luo, P., Loy, C.C., Tang, X.: Facial landmark detection by deep multi-task learning. In: Fleet, D., Pajdla, T., Schiele, B., Tuytelaars, T. (eds.) ECCV 2014. LNCS, vol. 8694, pp. 94–108. Springer, Cham (2014). doi:10.1007/978-3-319-10599-4_7 CrossRef Zhang, Z., Luo, P., Loy, C.C., Tang, X.: Facial landmark detection by deep multi-task learning. In: Fleet, D., Pajdla, T., Schiele, B., Tuytelaars, T. (eds.) ECCV 2014. LNCS, vol. 8694, pp. 94–108. Springer, Cham (2014). doi:10.​1007/​978-3-319-10599-4_​7 CrossRef
17.
Zurück zum Zitat Zhen, X., Islam, A., Bhaduri, M., Chan, I., Li, S.: Direct and simultaneous four-chamber volume estimation by multi-output regression. In: Navab, N., Hornegger, J., Wells, W.M., Frangi, A.F. (eds.) MICCAI 2015. LNCS, vol. 9349, pp. 669–676. Springer, Cham (2015). doi:10.1007/978-3-319-24553-9_82 CrossRef Zhen, X., Islam, A., Bhaduri, M., Chan, I., Li, S.: Direct and simultaneous four-chamber volume estimation by multi-output regression. In: Navab, N., Hornegger, J., Wells, W.M., Frangi, A.F. (eds.) MICCAI 2015. LNCS, vol. 9349, pp. 669–676. Springer, Cham (2015). doi:10.​1007/​978-3-319-24553-9_​82 CrossRef
18.
Zurück zum Zitat Zhen, X., Wang, Z., Islam, A., Bhaduri, M., Chan, I., Li, S.: Direct estimation of cardiac bi-ventricular volumes with regression forests. In: Golland, P., Hata, N., Barillot, C., Hornegger, J., Howe, R. (eds.) MICCAI 2014. LNCS, vol. 8674, pp. 586–593. Springer, Cham (2014). doi:10.1007/978-3-319-10470-6_73 CrossRef Zhen, X., Wang, Z., Islam, A., Bhaduri, M., Chan, I., Li, S.: Direct estimation of cardiac bi-ventricular volumes with regression forests. In: Golland, P., Hata, N., Barillot, C., Hornegger, J., Howe, R. (eds.) MICCAI 2014. LNCS, vol. 8674, pp. 586–593. Springer, Cham (2014). doi:10.​1007/​978-3-319-10470-6_​73 CrossRef
19.
Zurück zum Zitat Zhen, X., Wang, Z., Islam, A., Bhaduri, M., Chan, I., Li, S.: Multi-scale deep networks and regression forests for direct bi-ventricular volume estimation. Med. Image Anal. 30, 120–129 (2016)CrossRef Zhen, X., Wang, Z., Islam, A., Bhaduri, M., Chan, I., Li, S.: Multi-scale deep networks and regression forests for direct bi-ventricular volume estimation. Med. Image Anal. 30, 120–129 (2016)CrossRef
20.
Zurück zum Zitat Zhen, X., Zhang, H., Islam, A., Bhaduri, M., Chan, I., Li, S.: Direct and simultaneous estimation of cardiac four chamber volumes by multioutput sparse regression. Med. Image Anal. 36, 184–196 (2017)CrossRef Zhen, X., Zhang, H., Islam, A., Bhaduri, M., Chan, I., Li, S.: Direct and simultaneous estimation of cardiac four chamber volumes by multioutput sparse regression. Med. Image Anal. 36, 184–196 (2017)CrossRef
Metadaten
Titel
Full Quantification of Left Ventricle via Deep Multitask Learning Network Respecting Intra- and Inter-Task Relatedness
verfasst von
Wufeng Xue
Andrea Lum
Ashley Mercado
Mark Landis
James Warrington
Shuo Li
Copyright-Jahr
2017
DOI
https://doi.org/10.1007/978-3-319-66179-7_32