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Erschienen in: International Journal of Computer Assisted Radiology and Surgery 2/2014

01.03.2014 | Original Article

Automated aorta segmentation in low-dose chest CT images

verfasst von: Yiting Xie, Jennifer Padgett, Alberto M. Biancardi, Anthony P. Reeves

Erschienen in: International Journal of Computer Assisted Radiology and Surgery | Ausgabe 2/2014

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Abstract

Purpose

   Abnormalities of aortic surface and aortic diameter can be related to cardiovascular disease and aortic aneurysm. Computer-based aortic segmentation and measurement may aid physicians in related disease diagnosis. This paper presents a fully automated algorithm for aorta segmentation in low-dose non-contrast CT images.

Methods

   The original non-contrast CT scan images as well as their pre-computed anatomy label maps are used to locate the aorta and identify its surface. First a seed point is located inside the aortic lumen. Then, a cylindrical model is progressively fitted to the 3D image space to track the aorta centerline. Finally, the aortic surface is located based on image intensity information. This algorithm has been trained and tested on 359 low-dose non-contrast CT images from VIA-ELCAP and LIDC public image databases. Twenty images were used for training to obtain the optimal set of parameters, while the remaining images were used for testing. The segmentation result has been evaluated both qualitatively and quantitatively. Sixty representative testing images were used to establish a partial ground truth by manual marking on several axial image slices.

Results

   Compared to ground truth marking, the segmentation result had a mean Dice Similarity Coefficient of 0.933 (maximum 0.963 and minimum 0.907). The average boundary distance between manual segmentation and automatic segmentation was 1.39 mm with a maximum of 1.79 mm and a minimum of 0.83 mm.

Conclusion

   Both qualitative and quantitative evaluations have shown that the presented algorithm is able to accurately segment the aorta in low-dose non-contrast CT images.

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Literatur
1.
Zurück zum Zitat Schwartz S, Taljanovic M, Smyth S, O’Brien M, Rogers L (2007) CT findings of rupture, impending rupture, and contained rupture of abdominal aortic aneurysms. Am J Roentgenol 188(1):57–62 Schwartz S, Taljanovic M, Smyth S, O’Brien M, Rogers L (2007) CT findings of rupture, impending rupture, and contained rupture of abdominal aortic aneurysms. Am J Roentgenol 188(1):57–62
2.
Zurück zum Zitat Hu S, Hoffman EA, Reinhardt JM (2001) Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images. IEEE Trans Med Imaging 20:490–498PubMedCrossRef Hu S, Hoffman EA, Reinhardt JM (2001) Automatic lung segmentation for accurate quantitation of volumetric X-ray CT images. IEEE Trans Med Imaging 20:490–498PubMedCrossRef
3.
Zurück zum Zitat Schwartz E, Gottardi R, Holfeld J, Loewe C, Czerny M, Langs G (2010) Evaluating deformation patterns of the thoracic aorta in gated CTA sequences, ISBI, pp 21–24 Schwartz E, Gottardi R, Holfeld J, Loewe C, Czerny M, Langs G (2010) Evaluating deformation patterns of the thoracic aorta in gated CTA sequences, ISBI, pp 21–24
4.
Zurück zum Zitat Wang S, Fu L, Yue Y, Kang Y, Liu J (2009) Fast and automatic segmentation of ascending aorta in MSCT volume data, CISP, pp 1–5 Wang S, Fu L, Yue Y, Kang Y, Liu J (2009) Fast and automatic segmentation of ascending aorta in MSCT volume data, CISP, pp 1–5
5.
Zurück zum Zitat Kurkure U, Avila-Montes OC, Kakadiaris IA (2008) Automated segmentation of thoracic aorta in non-contrast CT images, ISBI, pp 29–32 Kurkure U, Avila-Montes OC, Kakadiaris IA (2008) Automated segmentation of thoracic aorta in non-contrast CT images, ISBI, pp 29–32
6.
Zurück zum Zitat Isgum I, Staring M, Rutten A, Prokop M, Viergever MA, van Ginneken B (2009) Multi-atlas-based segmentation with local decision fusion-application to cardiac and aortic segmentation in CT scans. IEEE Trans Med Imaging 28:1000–1010 Isgum I, Staring M, Rutten A, Prokop M, Viergever MA, van Ginneken B (2009) Multi-atlas-based segmentation with local decision fusion-application to cardiac and aortic segmentation in CT scans. IEEE Trans Med Imaging 28:1000–1010
7.
Zurück zum Zitat Naranjo V, Angulo J, Villanueva E, Alcaniz M, Lopez-Celdada S (2011) Aorta segmentation using the watershed algorithm for an augmented reality system in laparoscopic surgery, ICIP, pp 2649–2652 Naranjo V, Angulo J, Villanueva E, Alcaniz M, Lopez-Celdada S (2011) Aorta segmentation using the watershed algorithm for an augmented reality system in laparoscopic surgery, ICIP, pp 2649–2652
8.
Zurück zum Zitat Burger P, Forbat SM, Mohiaddin RD, Yang GZ (1997) Automatic tracking of the aorta in cardiovascular MR images using deformable models. IEEE Trans Med Imaging 16:581–590PubMedCrossRef Burger P, Forbat SM, Mohiaddin RD, Yang GZ (1997) Automatic tracking of the aorta in cardiovascular MR images using deformable models. IEEE Trans Med Imaging 16:581–590PubMedCrossRef
9.
Zurück zum Zitat Al-Agamy AO, Osman NF, Fahmy AS (2010) Segmentation of ascending and descending aorta from magnetic resonance flow images, 5th CIBEC, pp 41–44 Al-Agamy AO, Osman NF, Fahmy AS (2010) Segmentation of ascending and descending aorta from magnetic resonance flow images, 5th CIBEC, pp 41–44
10.
Zurück zum Zitat De Gonzalez AB, Darby S (2004) Risk of cancer from diagnostic X-rays: estimates for the UK and 14 other countries. Lancet 363(9406):345–351CrossRef De Gonzalez AB, Darby S (2004) Risk of cancer from diagnostic X-rays: estimates for the UK and 14 other countries. Lancet 363(9406):345–351CrossRef
11.
Zurück zum Zitat Reeves AP, Biancardi AM, Yankelevitz DF, Cham MD Henschke CI (2012) Heart region segmentation from low-dose CT scans: an anatomy based approach, SPIE International Symposium on Medical, Imaging, pp 83142A Reeves AP, Biancardi AM, Yankelevitz DF, Cham MD Henschke CI (2012) Heart region segmentation from low-dose CT scans: an anatomy based approach, SPIE International Symposium on Medical, Imaging, pp 83142A
13.
Zurück zum Zitat Armato SG et al (2011) The lung image database consortium (LIDC) and image database resource initiative (IDRI): a completed reference database of lung nodules on CT scans. Med Phys 38:915–931PubMedCentralPubMedCrossRef Armato SG et al (2011) The lung image database consortium (LIDC) and image database resource initiative (IDRI): a completed reference database of lung nodules on CT scans. Med Phys 38:915–931PubMedCentralPubMedCrossRef
14.
Zurück zum Zitat Lee J, Reeves AP (2009) Segmentation of the airway tree from chest CT using local volume of interest, 2nd International workshop of pulmonary image, analysis, pp 333–340 Lee J, Reeves AP (2009) Segmentation of the airway tree from chest CT using local volume of interest, 2nd International workshop of pulmonary image, analysis, pp 333–340
15.
Zurück zum Zitat Wala J (2011) Automated pulmonary artery segmentation by vessel tracking in low-dose computed tomography images. Cornell University, Ithaca, Masters Dissertation Wala J (2011) Automated pulmonary artery segmentation by vessel tracking in low-dose computed tomography images. Cornell University, Ithaca, Masters Dissertation
16.
Zurück zum Zitat Lee J, Reeves AP, Fotin S, Apanasovich T, Yankelevitz D (2008) Human airway measurement from CT images, SPIE International Symposium on Medical, Imaging, p 691518 Lee J, Reeves AP, Fotin S, Apanasovich T, Yankelevitz D (2008) Human airway measurement from CT images, SPIE International Symposium on Medical, Imaging, p 691518
17.
Zurück zum Zitat Fotin SV, Reeves AP, Cham MD, Yankelevitz DF, Henschke CI (2007) Segmentation of coronary arteries from CT angiography images, SPIE International Symposium on Medical, Imaging, pp 651418 Fotin SV, Reeves AP, Cham MD, Yankelevitz DF, Henschke CI (2007) Segmentation of coronary arteries from CT angiography images, SPIE International Symposium on Medical, Imaging, pp 651418
18.
Zurück zum Zitat Keller B, Reeves AP, Cham MD, Henschke CI, Yankelevitz DF (2007) Semi-automated location identification of catheters in digital chest radiographs, SPIE International Symposium on Medical, Imaging, pp 651410 Keller B, Reeves AP, Cham MD, Henschke CI, Yankelevitz DF (2007) Semi-automated location identification of catheters in digital chest radiographs, SPIE International Symposium on Medical, Imaging, pp 651410
19.
Zurück zum Zitat Lee J, Reeves AP (2010) Segmentation of individual ribs from low-dose chest CT, SPIE International Symposium on Medical, Imaging, p 76243J Lee J, Reeves AP (2010) Segmentation of individual ribs from low-dose chest CT, SPIE International Symposium on Medical, Imaging, p 76243J
Metadaten
Titel
Automated aorta segmentation in low-dose chest CT images
verfasst von
Yiting Xie
Jennifer Padgett
Alberto M. Biancardi
Anthony P. Reeves
Publikationsdatum
01.03.2014
Verlag
Springer Berlin Heidelberg
Erschienen in
International Journal of Computer Assisted Radiology and Surgery / Ausgabe 2/2014
Print ISSN: 1861-6410
Elektronische ISSN: 1861-6429
DOI
https://doi.org/10.1007/s11548-013-0924-5

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